Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:31 (1906605): wrapper (7.7.26015): starting
22:41:31 (1906605): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:41:31] Arguments: --nthreads 8
[2025-11-25 22:41:31] Threads: 8
[2025-11-25 22:41:31] Checking for CVMFS
[2025-11-25 22:41:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:41:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:41:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:41:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:41:33] 2.13.3.0 13172 29524 386432 153307 0 145 21569879 32935936 39674 16776704 0 153197599 99.537 169066584 34964 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:41:33] CVMFS is ok
[2025-11-25 22:41:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:41:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:41:33] Further information can be found at the LHC@home message board.
[2025-11-25 22:41:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:41:33] Checking for apptainer binary...
[2025-11-25 22:41:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:41:33] Running /usr/bin/apptainer --version
[2025-11-25 22:41:33] apptainer version 1.4.4-1.el9
[2025-11-25 22:41:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:41:34] c6-6-8-3.aglt2.org
[2025-11-25 22:41:34] apptainer works
[2025-11-25 22:41:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:41:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:41:34] Starting ATLAS job with PandaID=6896577815
[2025-11-25 22:41:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:20:07 (1906605): BOINC client no longer exists - exiting
13:20:07 (1906605): timer handler: client dead, exiting
13:20:45 (1728669): wrapper (7.7.26015): starting
13:20:45 (1728669): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:20:45] Arguments: --nthreads 8
[2025-11-26 13:20:45] Threads: 8
[2025-11-26 13:20:45] This job has been restarted, cleaning up previous attempt
[2025-11-26 13:20:45] Checking for CVMFS
[2025-11-26 13:20:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:20:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:20:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:20:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:20:45] 2.13.3.0 13172 30403 374404 153331 3 439 24192179 32935937 35383 16776704 0 159168469 99.541 174462204 34908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:20:45] CVMFS is ok
[2025-11-26 13:20:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:20:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:20:45] Further information can be found at the LHC@home message board.
[2025-11-26 13:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:20:45] Checking for apptainer binary...
[2025-11-26 13:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:20:45] Running /usr/bin/apptainer --version
[2025-11-26 13:20:45] apptainer version 1.4.4-1.el9
[2025-11-26 13:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:20:46] c6-6-8-3.aglt2.org
[2025-11-26 13:20:46] apptainer works
[2025-11-26 13:20:46] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:20:46] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:20:46] Starting ATLAS job with PandaID=6896577815
[2025-11-26 13:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:51:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:51:11] 2025-11-27 21:50:31,062 | INFO     | sum of deviations: 4978394239139.125
[2025-11-27 16:51:11] 2025-11-27 21:50:31,062 | INFO     | mean x: 1764230733.1282368
[2025-11-27 16:51:11] 2025-11-27 21:50:31,062 | INFO     | mean y: 2916280.643649815
[2025-11-27 16:51:11] 2025-11-27 21:50:31,062 | INFO     | intersect: -6634894499.586015
[2025-11-27 16:51:11] 2025-11-27 21:50:31,070 | INFO     | chi2: 14.423267104682795
[2025-11-27 16:51:11] 2025-11-27 21:50:31,072 | INFO     | sum of square deviations: 1310984744432.1836
[2025-11-27 16:51:11] 2025-11-27 21:50:31,181 | INFO     | sum of deviations: 5578501019876.089
[2025-11-27 16:51:11] 2025-11-27 21:50:31,182 | INFO     | mean x: 1764230580.6363637
[2025-11-27 16:51:11] 2025-11-27 21:50:31,182 | INFO     | mean y: 2923781.287569573
[2025-11-27 16:51:11] 2025-11-27 21:50:31,182 | INFO     | intersect: -7504228483.584303
[2025-11-27 16:51:11] 2025-11-27 21:50:31,184 | INFO     | chi2: 10.615469815480262
[2025-11-27 16:51:11] 2025-11-27 21:50:31,188 | INFO     | current chi2=10.615469815480262 (change=26.400379758385373 %)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,191 | INFO     | sum of square deviations: 1298862040547.3213
[2025-11-27 16:51:11] 2025-11-27 21:50:31,298 | INFO     | sum of deviations: 6096118907864.239
[2025-11-27 16:51:11] 2025-11-27 21:50:31,298 | INFO     | mean x: 1764230428.144541
[2025-11-27 16:51:11] 2025-11-27 21:50:31,299 | INFO     | mean y: 2930292.9646401987
[2025-11-27 16:51:11] 2025-11-27 21:50:31,299 | INFO     | intersect: -8277362867.584865
[2025-11-27 16:51:11] 2025-11-27 21:50:31,301 | INFO     | chi2: 7.7673488429396915
[2025-11-27 16:51:11] 2025-11-27 21:50:31,306 | INFO     | current chi2=7.7673488429396915 (change=26.829909764212513 %)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,308 | INFO     | sum of square deviations: 1286814314812.2449
[2025-11-27 16:51:11] 2025-11-27 21:50:31,508 | INFO     | sum of deviations: 6663505656050.397
[2025-11-27 16:51:11] 2025-11-27 21:50:31,551 | INFO     | mean x: 1764230275.652769
[2025-11-27 16:51:11] 2025-11-27 21:50:31,552 | INFO     | mean y: 2937472.077784692
[2025-11-27 16:51:11] 2025-11-27 21:50:31,552 | INFO     | intersect: -9132769432.226318
[2025-11-27 16:51:11] 2025-11-27 21:50:31,554 | INFO     | chi2: 4.303645952097666
[2025-11-27 16:51:11] 2025-11-27 21:50:31,555 | INFO     | current chi2=4.303645952097666 (change=44.593116144003716 %)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,564 | INFO     | sum of square deviations: 1274840844427.0454
[2025-11-27 16:51:11] 2025-11-27 21:50:31,724 | INFO     | sum of deviations: 6912786430060.312
[2025-11-27 16:51:11] 2025-11-27 21:50:31,724 | INFO     | mean x: 1764230123.1579275
[2025-11-27 16:51:11] 2025-11-27 21:50:31,724 | INFO     | mean y: 2940646.1766541824
[2025-11-27 16:51:11] 2025-11-27 21:50:31,725 | INFO     | intersect: -9563544541.510374
[2025-11-27 16:51:11] 2025-11-27 21:50:31,727 | INFO     | chi2: 3.4867326423780733
[2025-11-27 16:51:11] 2025-11-27 21:50:31,728 | INFO     | current chi2=3.4867326423780733 (change=18.981889282072935 %)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,728 | INFO     | right removable region: 1601
[2025-11-27 16:51:11] 2025-11-27 21:50:31,731 | INFO     | sum of square deviations: 1310982440102.9956
[2025-11-27 16:51:11] 2025-11-27 21:50:31,789 | INFO     | monitor loop #5077: job 0:6896577815 is in state 'finished'
[2025-11-27 16:51:11] 2025-11-27 21:50:31,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,898 | INFO     | sum of deviations: 4518240838379.479
[2025-11-27 16:51:11] 2025-11-27 21:50:31,898 | INFO     | mean x: 1764230885.6345084
[2025-11-27 16:51:11] 2025-11-27 21:50:31,899 | INFO     | mean y: 2922028.554112554
[2025-11-27 16:51:11] 2025-11-27 21:50:31,899 | INFO     | intersect: -6077418784.537162
[2025-11-27 16:51:11] 2025-11-27 21:50:31,918 | INFO     | chi2: 12.211326864232774
[2025-11-27 16:51:11] 2025-11-27 21:50:31,919 | INFO     | current chi2=12.211326864232774 (change=15.335916782209985 %)
[2025-11-27 16:51:11] 2025-11-27 21:50:31,919 | INFO     | left removable region: 10
[2025-11-27 16:51:11] 2025-11-27 21:50:31,921 | INFO     | sum of square deviations: 1248758606731.7793
[2025-11-27 16:51:11] 2025-11-27 21:50:32,231 | INFO     | sum of deviations: 6333552423019.217
[2025-11-27 16:51:11] 2025-11-27 21:50:32,231 | INFO     | mean x: 1764230397.6662476
[2025-11-27 16:51:11] 2025-11-27 21:50:32,251 | INFO     | mean y: 2949061.3318667505
[2025-11-27 16:51:11] 2025-11-27 21:50:32,252 | INFO     | intersect: -8945013859.337914
[2025-11-27 16:51:11] 2025-11-27 21:50:32,254 | INFO     | chi2: 1.0169211010941956
[2025-11-27 16:51:11] 2025-11-27 21:50:32,254 | INFO     | current memory leak: 5.07 B/s (using 1591 data points, chi2=1.02)
[2025-11-27 16:51:11] 2025-11-27 21:50:32,279 | INFO     | could have reported an average CPU frequency of 2651 MHz (57 samples)
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | ..............................
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . Timing measurements:
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . get job = 0 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . initial setup = 2 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . payload setup = 7 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . stage-in = 0 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . payload execution = 98893 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . stage-out = 15 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | . log creation = 2 s
[2025-11-27 16:51:11] 2025-11-27 21:50:32,280 | INFO     | ..............................
[2025-11-27 16:51:11] 2025-11-27 21:50:32,826 | INFO     | time since job start (98973s) is within the limit (172800.0s)
[2025-11-27 16:51:11] 2025-11-27 21:50:33,055 | INFO     | 
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | job summary report
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | --------------------------------------------------
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | PanDA job id: 6896577815
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | task id: 47556161
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | errors: (none)
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | pilot state: finished 
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | transexitcode: 0
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | exeerrorcode: 0
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | exeerrordiag: 
[2025-11-27 16:51:11] 2025-11-27 21:50:33,057 | INFO     | exitcode: 0
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | exitmsg: OK
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | cpuconsumptiontime: 282761 s
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | nevents: 1000
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | neventsw: 0
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | pid: 1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | pgrp: 1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | corecount: 8
[2025-11-27 16:51:11] 2025-11-27 21:50:33,058 | INFO     | event service: False
[2025-11-27 16:51:11] 2025-11-27 21:50:33,059 | INFO     | sizes: {0: 2284262, 5: 2284524, 11: 2284580, 98905: 2353605, 98921: 2362599, 98922: 2362655, 98957: 2363029}
[2025-11-27 16:51:11] 2025-11-27 21:50:33,059 | INFO     | --------------------------------------------------
[2025-11-27 16:51:11] 2025-11-27 21:50:33,059 | INFO     | 
[2025-11-27 16:51:11] 2025-11-27 21:50:33,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 16:51:11] 2025-11-27 21:50:33,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:51:11] 2025-11-27 21:50:33,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:51:11] 2025-11-27 21:50:33,172 | INFO     | job 6896577815 has completed (purged errors)
[2025-11-27 16:51:11] 2025-11-27 21:50:33,172 | INFO     | overall cleanup function is called
[2025-11-27 16:51:11] 2025-11-27 21:50:34,211 | INFO     | --- collectZombieJob: --- 10, [1791032]
[2025-11-27 16:51:11] 2025-11-27 21:50:34,212 | INFO     | zombie collector waiting for pid 1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:34,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:51:11] 2025-11-27 21:50:34,212 | INFO     | collected zombie processes
[2025-11-27 16:51:11] 2025-11-27 21:50:34,212 | INFO     | will attempt to kill all subprocesses of pid=1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:36,491 | INFO     | process IDs to be killed: [1791032] (in reverse order)
[2025-11-27 16:51:11] 2025-11-27 21:50:37,709 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:51:11] 2025-11-27 21:50:37,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:51:11] 2025-11-27 21:50:37,763 | INFO     | did not find any defunct processes belonging to 1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:37,815 | INFO     | did not find any defunct processes belonging to 1791032
[2025-11-27 16:51:11] 2025-11-27 21:50:37,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:51:11] 2025-11-27 21:50:37,820 | INFO     | ready for new job
[2025-11-27 16:51:11] 2025-11-27 21:50:37,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:51:11] 2025-11-27 21:50:37,858 | INFO     | ***************************************
[2025-11-27 16:51:11] 2025-11-27 21:50:37,863 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:51:11] 2025-11-27 21:50:37,863 | INFO     | ***************************************
[2025-11-27 16:51:11] 2025-11-27 21:50:37,863 | INFO     | 
[2025-11-27 16:51:11] 2025-11-27 21:50:37,873 | INFO     | architecture information:
[2025-11-27 16:51:11] 2025-11-27 21:50:37,874 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:51:11] 2025-11-27 21:50:37,971 | INFO     | cat /etc/os-release:
[2025-11-27 16:51:11] NAME="CentOS Linux"
[2025-11-27 16:51:11] VERSION="7 (Core)"
[2025-11-27 16:51:11] ID="centos"
[2025-11-27 16:51:11] ID_LIKE="rhel fedora"
[2025-11-27 16:51:11] VERSION_ID="7"
[2025-11-27 16:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:51:11] ANSI_COLOR="0;31"
[2025-11-27 16:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:51:11] HOME_URL="https://www.centos.org/"
[2025-11-27 16:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:51:11] 
[2025-11-27 16:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:51:11] 
[2025-11-27 16:51:11] 2025-11-27 21:50:37,971 | INFO     | ***************************************
[2025-11-27 16:51:11] 2025-11-27 21:50:38,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 16:51:11] 2025-11-27 21:50:38,613 | INFO     | sufficient remaining disk space (90366279680 B)
[2025-11-27 16:51:11] 2025-11-27 21:50:38,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:51:11] 2025-11-27 21:50:38,617 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:51:11] 2025-11-27 21:50:38,617 | INFO     | update_server=False
[2025-11-27 16:51:11] 2025-11-27 21:50:38,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:51:11] 2025-11-27 21:50:38,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:51:11] 2025-11-27 21:50:38,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:51:11] 2025-11-27 21:50:38,623 | INFO     | aborting loop
[2025-11-27 16:51:11] 2025-11-27 21:50:38,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:51:11] 2025-11-27 21:50:38,682 | INFO     | all payload control threads have been joined
[2025-11-27 16:51:11] 2025-11-27 21:50:39,090 | INFO     | all data control threads have been joined
[2025-11-27 16:51:11] 2025-11-27 21:50:39,498 | INFO     | all job control threads have been joined
[2025-11-27 16:51:11] 2025-11-27 21:50:39,627 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,628 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,630 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,688 | INFO     | [payload] control thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,839 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,840 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:39,892 | INFO     | [job] validate thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,109 | INFO     | [data] control thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,514 | INFO     | [job] control thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,527 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,534 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,545 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,578 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,632 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:40,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:51:11] 2025-11-27 21:50:40,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:50:44,836 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:51:11] 2025-11-27 21:51:03,104 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:51:11] 2025-11-27 21:51:04,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715964688192)>', '<ExcThread(monitor, started 139715344852736)>']
[2025-11-27 16:51:11] 2025-11-27 21:51:08,623 | INFO     | PID=1750966 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:51:11] 2025-11-27 21:51:08,624 | INFO     | .. there are 52 such processes running
[2025-11-27 16:51:11] 2025-11-27 21:51:08,626 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:51:11] 2025-11-27 21:51:08,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:51:11] 2025-11-27 21:51:08,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:51:11] 2025-11-27 21:51:08,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:51:11] 2025-11-27 21:51:08,627 | INFO     | [monitor] control thread has ended
[2025-11-27 16:51:11] 2025-11-27 21:51:09,455 | INFO     | all workflow threads have been joined
[2025-11-27 16:51:11] 2025-11-27 21:51:09,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:51:11] 2025-11-27 21:51:09,456 | INFO     | traces error code: 0
[2025-11-27 16:51:11] 2025-11-27 21:51:09,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:51:11] 2025-11-27 21:51:10,232 [wrapper] supervise_pilot (15 min periods counter: 111)
[2025-11-27 16:51:11] 2025-11-27 21:51:10,460 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:51:11] 2025-11-27 21:51:10,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:51:11] 2025-11-27 21:51:10,516 [wrapper] pilotpid: 1750966
[2025-11-27 16:51:11] 2025-11-27 21:51:10,533 [wrapper] Pilot exit status: 0
[2025-11-27 16:51:11] 2025-11-27 21:51:10,645 [wrapper] pandaids: 6896577815 6896577815
[2025-11-27 16:51:11] 2025-11-27 21:51:11,219 [wrapper] cleanup supervisor_pilot 1149989 1750968
[2025-11-27 16:51:11] 2025-11-27 21:51:11,232 [wrapper] Test setup, not cleaning
[2025-11-27 16:51:11] 2025-11-27 21:51:11,268 [wrapper] apfmon messages muted
[2025-11-27 16:51:11] 2025-11-27 21:51:11,348 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:51:11] 2025-11-27 21:51:11,355 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:51:11]  *** Error codes and diagnostics ***
[2025-11-27 16:51:11]     "exeErrorCode": 0,
[2025-11-27 16:51:11]     "exeErrorDiag": "",
[2025-11-27 16:51:11]     "pilotErrorCode": 0,
[2025-11-27 16:51:11]     "pilotErrorDiag": "",
[2025-11-27 16:51:11]  *** Listing of results directory ***
[2025-11-27 16:51:11] total 1746404
[2025-11-27 16:51:11] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 16:51:11] -rwx------. 1 boincer umatlas     36292 Nov 25 00:25 runpilot2-wrapper.sh
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:25 queuedata.json
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:51:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:41 run_atlas
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:41 job.xml
[2025-11-27 16:51:11] -rw-r--r--. 3 boincer umatlas 411600650 Nov 25 22:41 EVNT.47483658._002101.pool.root.1
[2025-11-27 16:51:11] -rw-r--r--. 3 boincer umatlas 411600650 Nov 25 22:41 ATLAS.root_0
[2025-11-27 16:51:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:41 start_atlas.sh
[2025-11-27 16:51:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:41 shared
[2025-11-27 16:51:11] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 22:41 input.tar.gz
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:41 boinc_lockfile
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 13:20 pandaJob.out
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas        57 Nov 26 13:20 setup.sh.local
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas    991522 Nov 26 13:20 agis_schedconf.cvmfs.json
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas       534 Nov 27 16:16 boinc_task_state.xml
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas 933516838 Nov 27 16:46 HITS.47556161._000845.pool.root.1
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas      6880 Nov 27 16:49 init_data.xml
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas      1070 Nov 27 16:49 memory_monitor_summary.json
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas   2520408 Nov 27 16:49 log.47556161._000845.job.log.tgz.1
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas      8637 Nov 27 16:50 heartbeat.json
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas        95 Nov 27 16:51 pilot_heartbeat.json
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas      4824 Nov 27 16:51 pilotlog.txt
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:51 boinc_mmap_file
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas        30 Nov 27 16:51 wrapper_checkpoint.txt
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas  11312821 Nov 27 16:51 log.47556161._000845.job.log.1
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas       353 Nov 27 16:51 output.list
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:51 runtime_log
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas  13854720 Nov 27 16:51 result.tar.gz
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas      9428 Nov 27 16:51 runtime_log.err
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas       790 Nov 27 16:51 rncMDmoj0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbAMKDm0mcUDm.diag
[2025-11-27 16:51:11] -rw-r--r--. 1 boincer umatlas     23497 Nov 27 16:51 stderr.txt
[2025-11-27 16:51:11] HITS file was successfully produced:
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas 933516838 Nov 27 16:46 shared/HITS.pool.root.1
[2025-11-27 16:51:11]  *** Contents of shared directory: ***
[2025-11-27 16:51:11] total 1327732
[2025-11-27 16:51:11] -rw-r--r--. 3 boincer umatlas 411600650 Nov 25 22:41 ATLAS.root_0
[2025-11-27 16:51:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:41 start_atlas.sh
[2025-11-27 16:51:11] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 22:41 input.tar.gz
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas 933516838 Nov 27 16:46 HITS.pool.root.1
[2025-11-27 16:51:11] -rw-------. 1 boincer umatlas  13854720 Nov 27 16:51 result.tar.gz
16:51:13 (1728669): run_atlas exited; CPU time 287431.478742
16:51:13 (1728669): called boinc_finish(0)

</stderr_txt>
]]>

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