Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:43 (1275227): wrapper (7.7.26015): starting
17:16:43 (1275227): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:16:43] Arguments: --nthreads 8
[2025-11-25 17:16:43] Threads: 8
[2025-11-25 17:16:43] Checking for CVMFS
[2025-11-25 17:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:16:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:16:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:16:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:16:45] 2.11.3.0 1215219 27712 188544 153303 3 319 31531405 45568000 22132 130560 0 168728823 99.787 115639037 22113 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-25 17:16:45] CVMFS is ok
[2025-11-25 17:16:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:16:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:16:45] Further information can be found at the LHC@home message board.
[2025-11-25 17:16:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:16:45] Checking for apptainer binary...
[2025-11-25 17:16:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:16:45] Running /usr/bin/apptainer --version
[2025-11-25 17:16:45] apptainer version 1.4.1-1.el9
[2025-11-25 17:16:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:16:47] wns0018.triumf.lcg
[2025-11-25 17:16:47] apptainer works
[2025-11-25 17:16:47] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:16:47] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:16:47] Starting ATLAS job with PandaID=6897139554
[2025-11-25 17:16:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:22:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . Timing measurements:
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . get job = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . initial setup = 5 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . payload setup = 18 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . stage-in = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . payload execution = 99 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . stage-out = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . log creation = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897139554/pilotlog.txt
[2025-11-25 17:22:26] 2025-11-26 01:21:51,462 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 17:22:26] - Log from pilotlog.txt -
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897139554/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | extracted standard info from prmon json
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:22:26] 2025-11-26 01:21:51,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 17:22:26] 2025-11-26 01:21:51,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 17:22:26] 2025-11-26 01:21:51,397 | WARNING  | wrong length of table data, x=[1764119880.0, 1764119941.0], y=[1001.0, 363930.0] (must be same and length>=4)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . Timing measurements:
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . get job = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . initial setup = 5 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . payload setup = 18 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . stage-in = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . payload execution = 99 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . stage-out = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . log creation = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897139554/pilotlog.txt
[2025-11-25 17:22:26] 2025-11-26 01:21:51,462 | WARNING  | 
[2025-11-25 17:22:26] [begin log extracts]
[2025-11-25 17:22:26] - Log from pilotlog.txt -
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897139554/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | extracted standard info from prmon json
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:22:26] 2025-11-26 01:21:51,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:22:26] 2025-11-26 01:21:51,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 17:22:26] 2025-11-26 01:21:51,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 17:22:26] 2025-11-26 01:21:51,397 | WARNING  | wrong length of table data, x=[1764119880.0, 1764119941.0], y=[1001.0, 363930.0] (must be same and length>=4)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . Timing measurements:
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . get job = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . initial setup = 5 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . payload setup = 18 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,398 | INFO     | . stage-in = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . payload execution = 99 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . stage-out = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | . log creation = 0 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | ..............................
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 17:22:26] 2025-11-26 01:21:51,399 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897139554/pilotlog.txt
[2025-11-25 17:22:26] [end log extracts]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,464 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,464 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 17:22:26] 2025-11-26 01:21:51,523 | INFO     | time since job start (279s) is within the limit (172800.0s)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,755 | INFO     | 
[2025-11-25 17:22:26] 2025-11-26 01:21:51,755 | INFO     | job summary report
[2025-11-25 17:22:26] 2025-11-26 01:21:51,755 | INFO     | --------------------------------------------------
[2025-11-25 17:22:26] 2025-11-26 01:21:51,755 | INFO     | PanDA job id: 6897139554
[2025-11-25 17:22:26] 2025-11-26 01:21:51,755 | INFO     | task id: 47556161
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 17:19:26,995 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | pilot state: failed 
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | transexitcode: 65
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | exeerrorcode: 65
[2025-11-25 17:22:26] 2025-11-26 01:21:51,756 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 17:22:26] 2025-11-26 01:21:51,781 | INFO     | exitcode: 65
[2025-11-25 17:22:26] 2025-11-26 01:21:51,781 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 17:22:26] 2025-11-26 01:21:51,781 | INFO     | cpuconsumptiontime: 48 s
[2025-11-25 17:22:26] 2025-11-26 01:21:51,781 | INFO     | nevents: 0
[2025-11-25 17:22:26] 2025-11-26 01:21:51,781 | INFO     | neventsw: 0
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | pid: 1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | pgrp: 1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | corecount: 8
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | event service: False
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | sizes: {0: 2283431, 1: 2284284, 2: 2284312, 10: 2284574, 13: 2284602, 120: 2310151, 121: 2310255, 122: 2314573, 124: 2314601, 258: 2314767}
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | --------------------------------------------------
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | 
[2025-11-25 17:22:26] 2025-11-26 01:21:51,782 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 17:22:26] 2025-11-26 01:21:51,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | job 6897139554 has completed (purged errors)
[2025-11-25 17:22:26] 2025-11-26 01:21:51,988 | INFO     | overall cleanup function is called
[2025-11-25 17:22:26] 2025-11-26 01:21:53,049 | INFO     | --- collectZombieJob: --- 10, [1285631]
[2025-11-25 17:22:26] 2025-11-26 01:21:53,049 | INFO     | zombie collector waiting for pid 1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:53,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:22:26] 2025-11-26 01:21:53,049 | INFO     | collected zombie processes
[2025-11-25 17:22:26] 2025-11-26 01:21:53,049 | INFO     | will attempt to kill all subprocesses of pid=1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:54,021 | INFO     | process IDs to be killed: [1285631] (in reverse order)
[2025-11-25 17:22:26] 2025-11-26 01:21:54,325 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:22:26] 2025-11-26 01:21:54,326 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:22:26] 2025-11-26 01:21:54,347 | INFO     | did not find any defunct processes belonging to 1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:54,363 | INFO     | did not find any defunct processes belonging to 1285631
[2025-11-25 17:22:26] 2025-11-26 01:21:54,364 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:22:26] 2025-11-26 01:21:54,364 | INFO     | ready for new job
[2025-11-25 17:22:26] 2025-11-26 01:21:54,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:22:26] 2025-11-26 01:21:54,365 | INFO     | ***************************************
[2025-11-25 17:22:26] 2025-11-26 01:21:54,366 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:22:26] 2025-11-26 01:21:54,366 | INFO     | ***************************************
[2025-11-25 17:22:26] 2025-11-26 01:21:54,366 | INFO     | 
[2025-11-25 17:22:26] 2025-11-26 01:21:54,379 | INFO     | architecture information:
[2025-11-25 17:22:26] 2025-11-26 01:21:54,380 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:22:26] 2025-11-26 01:21:54,407 | INFO     | cat /etc/os-release:
[2025-11-25 17:22:26] NAME="CentOS Linux"
[2025-11-25 17:22:26] VERSION="7 (Core)"
[2025-11-25 17:22:26] ID="centos"
[2025-11-25 17:22:26] ID_LIKE="rhel fedora"
[2025-11-25 17:22:26] VERSION_ID="7"
[2025-11-25 17:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:22:26] ANSI_COLOR="0;31"
[2025-11-25 17:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:22:26] HOME_URL="https://www.centos.org/"
[2025-11-25 17:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:22:26] 
[2025-11-25 17:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:22:26] 
[2025-11-25 17:22:26] 2025-11-26 01:21:54,408 | INFO     | ***************************************
[2025-11-25 17:22:26] 2025-11-26 01:21:54,930 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 17:22:26] 2025-11-26 01:21:54,996 | INFO     | sufficient remaining disk space (1113689423872 B)
[2025-11-25 17:22:26] 2025-11-26 01:21:55,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:22:26] 2025-11-26 01:21:55,000 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:22:26] 2025-11-26 01:21:55,000 | INFO     | update_server=False
[2025-11-25 17:22:26] 2025-11-26 01:21:55,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:22:26] 2025-11-26 01:21:55,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:22:26] 2025-11-26 01:21:55,185 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 17:22:26] 2025-11-26 01:21:55,185 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 17:22:26] 2025-11-26 01:21:55,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:22:26] 2025-11-26 01:21:55,185 | INFO     | will abort loop
[2025-11-25 17:22:26] 2025-11-26 01:21:55,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:22:26] 2025-11-26 01:21:55,715 | INFO     | all data control threads have been joined
[2025-11-25 17:22:26] 2025-11-26 01:21:55,867 | INFO     | all payload control threads have been joined
[2025-11-25 17:22:26] 2025-11-26 01:21:56,006 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,195 | INFO     | [job] validate thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,196 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,334 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,617 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,664 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,685 | INFO     | all job control threads have been joined
[2025-11-25 17:22:26] 2025-11-26 01:21:56,721 | INFO     | [data] control thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,759 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:56,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:22:26] 2025-11-26 01:21:56,886 | INFO     | [payload] control thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:57,012 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:57,285 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:57,434 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:57,691 | INFO     | [job] control thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:57,800 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:21:59,548 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:22:26] 2025-11-26 01:22:11,143 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:22:26] 2025-11-26 01:22:11,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591582488384)>', '<ExcThread(monitor, started 140590905808640)>']
[2025-11-25 17:22:26] 2025-11-26 01:22:16,698 | INFO     | all workflow threads have been joined
[2025-11-25 17:22:26] 2025-11-26 01:22:16,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:22:26] 2025-11-26 01:22:16,699 | INFO     | traces error code: 0
[2025-11-25 17:22:26] 2025-11-26 01:22:16,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:22:26] 2025-11-26 01:22:25,254 | INFO     | PID=1278927 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 17:22:26] 2025-11-26 01:22:25,254 | INFO     | .. there are 33 such processes running
[2025-11-25 17:22:26] 2025-11-26 01:22:25,256 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:22:26] 2025-11-26 01:22:25,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:22:26] 2025-11-26 01:22:25,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:22:26] 2025-11-26 01:22:25,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:22:26] 2025-11-26 01:22:25,256 | INFO     | [monitor] control thread has ended
[2025-11-25 17:22:26] 2025-11-26 01:22:25,639 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:22:26] 2025-11-26 01:22:25,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:22:26] 2025-11-26 01:22:25,677 [wrapper] pilotpid: 1278927
[2025-11-25 17:22:26] 2025-11-26 01:22:25,688 [wrapper] Pilot exit status: 0
[2025-11-25 17:22:26] 2025-11-26 01:22:25,811 [wrapper] pandaids: 6897139554
[2025-11-25 17:22:26] 2025-11-26 01:22:26,030 [wrapper] cleanup supervisor_pilot 1278933 1278928
[2025-11-25 17:22:26] 2025-11-26 01:22:26,065 [wrapper] Test setup, not cleaning
[2025-11-25 17:22:26] 2025-11-26 01:22:26,085 [wrapper] apfmon messages muted
[2025-11-25 17:22:26] 2025-11-26 01:22:26,122 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:22:26] 2025-11-26 01:22:26,146 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:22:26]  *** Error codes and diagnostics ***
[2025-11-25 17:22:26]     "exeErrorCode": 65,
[2025-11-25 17:22:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 17:22:26]     "pilotErrorCode": 1305,
[2025-11-25 17:22:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 17:22:26]  *** Listing of results directory ***
[2025-11-25 17:22:26] total 403880
[2025-11-25 17:22:26] -rwx------. 1 boinc boinc     36292 Nov 25 08:48 runpilot2-wrapper.sh
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc      5112 Nov 25 08:48 queuedata.json
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc    576529 Nov 25 08:48 pilot3.tar.gz
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc       100 Nov 25 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:22:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 17:16 run_atlas
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc       105 Nov 25 17:16 job.xml
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc 409361515 Nov 25 17:16 EVNT.47483658._002186.pool.root.1
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc      6445 Nov 25 17:16 init_data.xml
[2025-11-25 17:22:26] drwxrwx--x. 2 boinc boinc      4096 Nov 25 17:16 shared
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc    590097 Nov 25 17:16 input.tar.gz
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 25 17:16 start_atlas.sh
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc         0 Nov 25 17:16 boinc_lockfile
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc      2783 Nov 25 17:16 pandaJob.out
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc    991877 Nov 25 17:17 agis_schedconf.cvmfs.json
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc   1516240 Nov 25 17:17 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:22:26] drwx------. 5 boinc boinc      4096 Nov 25 17:17 pilot3
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc       524 Nov 25 17:18 boinc_task_state.xml
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc       985 Nov 25 17:19 memory_monitor_summary.json
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc     48609 Nov 25 17:19 log.47556161._001691.job.log.tgz.1
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc     10323 Nov 25 17:21 heartbeat.json
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc      8192 Nov 25 17:22 boinc_mmap_file
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc        23 Nov 25 17:22 wrapper_checkpoint.txt
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc        95 Nov 25 17:22 pilot_heartbeat.json
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc       823 Nov 25 17:22 pilotlog.txt
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc    102364 Nov 25 17:22 log.47556161._001691.job.log.1
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc       186 Nov 25 17:22 output.list
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc       620 Nov 25 17:22 runtime_log
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc    174080 Nov 25 17:22 result.tar.gz
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc      8634 Nov 25 17:22 runtime_log.err
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc       646 Nov 25 17:22 pDNKDmSOBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCPMKDmy31vZm.diag
[2025-11-25 17:22:26] -rw-r--r--. 1 boinc boinc     22456 Nov 25 17:22 stderr.txt
[2025-11-25 17:22:26] No HITS result produced
[2025-11-25 17:22:26]  *** Contents of shared directory: ***
[2025-11-25 17:22:26] total 400540
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc 409361515 Nov 25 17:16 ATLAS.root_0
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc    590097 Nov 25 17:16 input.tar.gz
[2025-11-25 17:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 25 17:16 start_atlas.sh
[2025-11-25 17:22:26] -rw-------. 1 boinc boinc    174080 Nov 25 17:22 result.tar.gz
17:22:28 (1275227): run_atlas exited; CPU time 52.557475
17:22:28 (1275227): called boinc_finish(0)

</stderr_txt>
]]>

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