Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:42:34 (5255): wrapper (7.7.26015): starting
20:42:34 (5255): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:42:34] Arguments: --nthreads 8
[2025-11-25 20:42:34] Threads: 8
[2025-11-25 20:42:34] Checking for CVMFS
[2025-11-25 20:42:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:42:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:42:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:42:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:42:35] 2.11.2.0 1598 280357 116272 153304 2 82 17819588 20275201 943 130560 1 263920623 99.981 15683108 13238 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 20:42:35] CVMFS is ok
[2025-11-25 20:42:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:42:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:42:35] Further information can be found at the LHC@home message board.
[2025-11-25 20:42:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:42:35] Checking for apptainer binary...
[2025-11-25 20:42:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:42:35] Running /usr/bin/apptainer --version
[2025-11-25 20:42:35] apptainer version 1.3.2-1.el7
[2025-11-25 20:42:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:42:36] c-205-36.aglt2.org
[2025-11-25 20:42:36] apptainer works
[2025-11-25 20:42:36] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:42:36] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:42:36] Starting ATLAS job with PandaID=6896713669
[2025-11-25 20:42:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:02:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:02:33] 2025-11-26 08:01:39,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,685 | INFO     | time since job start (22733s) is within the limit (172800.0s)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,802 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 03:02:33] 2025-11-26 08:01:41,806 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2056.2558125000005
[2025-11-26 03:02:33] 2025-11-26 08:01:41,810 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896713669/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,811 | INFO     | extracted standard info from prmon json
[2025-11-26 03:02:33] 2025-11-26 08:01:41,811 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:02:33] 2025-11-26 08:01:41,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:02:33] 2025-11-26 08:01:41,819 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:02:33] 2025-11-26 08:01:41,819 | INFO     | sum of square deviations: 16092031038.123335
[2025-11-26 03:02:33] 2025-11-26 08:01:41,823 | INFO     | sum of deviations: 174774441564.44772
[2025-11-26 03:02:33] 2025-11-26 08:01:41,823 | INFO     | mean x: 1764132739.4450402
[2025-11-26 03:02:33] 2025-11-26 08:01:41,824 | INFO     | mean y: 2900515.485254692
[2025-11-26 03:02:33] 2025-11-26 08:01:41,824 | INFO     | intersect: -19157223750.470882
[2025-11-26 03:02:33] 2025-11-26 08:01:41,824 | INFO     | chi2: 4.3479177042653765
[2025-11-26 03:02:33] 2025-11-26 08:01:41,825 | INFO     | sum of square deviations: 15453595277.119564
[2025-11-26 03:02:33] 2025-11-26 08:01:41,829 | INFO     | sum of deviations: 280722660548.2171
[2025-11-26 03:02:33] 2025-11-26 08:01:41,829 | INFO     | mean x: 1764132586.951087
[2025-11-26 03:02:33] 2025-11-26 08:01:41,829 | INFO     | mean y: 2925741.9565217393
[2025-11-26 03:02:33] 2025-11-26 08:01:41,829 | INFO     | intersect: -32043467636.932697
[2025-11-26 03:02:33] 2025-11-26 08:01:41,830 | INFO     | chi2: 1.7029557373540054
[2025-11-26 03:02:33] 2025-11-26 08:01:41,830 | INFO     | current chi2=1.7029557373540054 (change=60.832843370439626 %)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,830 | INFO     | sum of square deviations: 14832276116.088205
[2025-11-26 03:02:33] 2025-11-26 08:01:41,834 | INFO     | sum of deviations: 277036529145.3526
[2025-11-26 03:02:33] 2025-11-26 08:01:41,834 | INFO     | mean x: 1764132434.4573002
[2025-11-26 03:02:33] 2025-11-26 08:01:41,834 | INFO     | mean y: 2924826.829201102
[2025-11-26 03:02:33] 2025-11-26 08:01:41,834 | INFO     | intersect: -32947454654.35368
[2025-11-26 03:02:33] 2025-11-26 08:01:41,835 | INFO     | chi2: 1.6862931502850154
[2025-11-26 03:02:33] 2025-11-26 08:01:41,835 | INFO     | current chi2=1.6862931502850154 (change=0.978450978114076 %)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,835 | INFO     | right removable region: 362
[2025-11-26 03:02:33] 2025-11-26 08:01:41,836 | INFO     | sum of square deviations: 15453494017.119564
[2025-11-26 03:02:33] 2025-11-26 08:01:41,839 | INFO     | sum of deviations: 95227188689.26628
[2025-11-26 03:02:33] 2025-11-26 08:01:41,839 | INFO     | mean x: 1764132891.951087
[2025-11-26 03:02:33] 2025-11-26 08:01:41,839 | INFO     | mean y: 2919420.4592391304
[2025-11-26 03:02:33] 2025-11-26 08:01:41,840 | INFO     | intersect: -10867982369.690098
[2025-11-26 03:02:33] 2025-11-26 08:01:41,840 | INFO     | chi2: 2.733329156568033
[2025-11-26 03:02:33] 2025-11-26 08:01:41,840 | INFO     | current chi2=2.733329156568033 (change=37.13475409420482 %)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,841 | INFO     | sum of square deviations: 14832118735.906324
[2025-11-26 03:02:33] 2025-11-26 08:01:41,844 | INFO     | sum of deviations: 82214148959.17625
[2025-11-26 03:02:33] 2025-11-26 08:01:41,844 | INFO     | mean x: 1764133044.4517906
[2025-11-26 03:02:33] 2025-11-26 08:01:41,844 | INFO     | mean y: 2922609.267217631
[2025-11-26 03:02:33] 2025-11-26 08:01:41,844 | INFO     | intersect: -9775632935.144156
[2025-11-26 03:02:33] 2025-11-26 08:01:41,845 | INFO     | chi2: 2.72266625121716
[2025-11-26 03:02:33] 2025-11-26 08:01:41,845 | INFO     | current chi2=2.72266625121716 (change=0.39010688944105165 %)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,845 | INFO     | left removable region: 20
[2025-11-26 03:02:33] 2025-11-26 08:01:41,846 | INFO     | sum of square deviations: 12404104285.70747
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | sum of deviations: 167000816372.19882
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | mean x: 1764133013.9707603
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | mean y: 2952272.619883041
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | intersect: -23748190634.307182
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | chi2: 0.027416352988206282
[2025-11-26 03:02:33] 2025-11-26 08:01:41,849 | INFO     | current memory leak: 13.46 B/s (using 342 data points, chi2=0.03)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | could have reported an average CPU frequency of 2398 MHz (16 samples)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | ..............................
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | . Timing measurements:
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | . get job = 0 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | . initial setup = 2 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | . payload setup = 6 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,850 | INFO     | . stage-in = 0 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,851 | INFO     | . payload execution = 22695 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,851 | INFO     | . stage-out = 3 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,851 | INFO     | . log creation = 0 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,851 | INFO     | ..............................
[2025-11-26 03:02:33] 2025-11-26 08:01:41,994 | INFO     | 
[2025-11-26 03:02:33] 2025-11-26 08:01:41,994 | INFO     | job summary report
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | --------------------------------------------------
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | PanDA job id: 6896713669
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | task id: 47556161
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | errors: (none)
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | pilot state: finished 
[2025-11-26 03:02:33] 2025-11-26 08:01:41,995 | INFO     | transexitcode: 0
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | exeerrorcode: 0
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | exeerrordiag: 
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | exitcode: 0
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | exitmsg: OK
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | cpuconsumptiontime: 176959 s
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | nevents: 1000
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | neventsw: 0
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | pid: 15367
[2025-11-26 03:02:33] 2025-11-26 08:01:41,996 | INFO     | pgrp: 15367
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | corecount: 8
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | event service: False
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | sizes: {0: 2284091, 1: 2284290, 5: 2284552, 11: 2284608, 22706: 2320355, 22709: 2329349, 22711: 2329533, 22719: 2329779}
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | --------------------------------------------------
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | 
[2025-11-26 03:02:33] 2025-11-26 08:01:41,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 03:02:33] 2025-11-26 08:01:42,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:02:33] 2025-11-26 08:01:42,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:02:33] 2025-11-26 08:01:42,021 | INFO     | job 6896713669 has completed (purged errors)
[2025-11-26 03:02:33] 2025-11-26 08:01:42,021 | INFO     | overall cleanup function is called
[2025-11-26 03:02:33] 2025-11-26 08:01:43,037 | INFO     | --- collectZombieJob: --- 10, [15367]
[2025-11-26 03:02:33] 2025-11-26 08:01:43,037 | INFO     | zombie collector waiting for pid 15367
[2025-11-26 03:02:33] 2025-11-26 08:01:43,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:02:33] 2025-11-26 08:01:43,038 | INFO     | collected zombie processes
[2025-11-26 03:02:33] 2025-11-26 08:01:43,038 | INFO     | will attempt to kill all subprocesses of pid=15367
[2025-11-26 03:02:33] 2025-11-26 08:01:43,171 | INFO     | process IDs to be killed: [15367] (in reverse order)
[2025-11-26 03:02:33] 2025-11-26 08:01:43,232 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:02:33] 2025-11-26 08:01:43,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:02:33] 2025-11-26 08:01:43,235 | INFO     | did not find any defunct processes belonging to 15367
[2025-11-26 03:02:33] 2025-11-26 08:01:43,237 | INFO     | did not find any defunct processes belonging to 15367
[2025-11-26 03:02:33] 2025-11-26 08:01:43,238 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:02:33] 2025-11-26 08:01:43,238 | INFO     | ready for new job
[2025-11-26 03:02:33] 2025-11-26 08:01:43,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:02:33] 2025-11-26 08:01:43,241 | INFO     | ***************************************
[2025-11-26 03:02:33] 2025-11-26 08:01:43,241 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:02:33] 2025-11-26 08:01:43,241 | INFO     | ***************************************
[2025-11-26 03:02:33] 2025-11-26 08:01:43,241 | INFO     | 
[2025-11-26 03:02:33] 2025-11-26 08:01:43,241 | INFO     | architecture information:
[2025-11-26 03:02:33] 2025-11-26 08:01:43,242 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:02:33] 2025-11-26 08:01:43,255 | INFO     | cat /etc/os-release:
[2025-11-26 03:02:33] NAME="CentOS Linux"
[2025-11-26 03:02:33] VERSION="7 (Core)"
[2025-11-26 03:02:33] ID="centos"
[2025-11-26 03:02:33] ID_LIKE="rhel fedora"
[2025-11-26 03:02:33] VERSION_ID="7"
[2025-11-26 03:02:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:02:33] ANSI_COLOR="0;31"
[2025-11-26 03:02:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:02:33] HOME_URL="https://www.centos.org/"
[2025-11-26 03:02:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:02:33] 
[2025-11-26 03:02:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:02:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:02:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:02:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:02:33] 
[2025-11-26 03:02:33] 2025-11-26 08:01:43,255 | INFO     | ***************************************
[2025-11-26 03:02:33] 2025-11-26 08:01:43,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 03:02:33] 2025-11-26 08:01:43,775 | INFO     | sufficient remaining disk space (30615273472 B)
[2025-11-26 03:02:33] 2025-11-26 08:01:43,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:02:33] 2025-11-26 08:01:43,776 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:02:33] 2025-11-26 08:01:43,776 | INFO     | update_server=False
[2025-11-26 03:02:33] 2025-11-26 08:01:43,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:02:33] 2025-11-26 08:01:43,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:02:33] 2025-11-26 08:01:43,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:02:33] 2025-11-26 08:01:43,777 | INFO     | aborting loop
[2025-11-26 03:02:33] 2025-11-26 08:01:44,067 | INFO     | all payload control threads have been joined
[2025-11-26 03:02:33] 2025-11-26 08:01:44,158 | INFO     | all data control threads have been joined
[2025-11-26 03:02:33] 2025-11-26 08:01:44,584 | INFO     | all job control threads have been joined
[2025-11-26 03:02:33] 2025-11-26 08:01:44,782 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:44,783 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:44,785 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:44,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:02:33] 2025-11-26 08:01:45,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:02:33] 2025-11-26 08:01:45,073 | INFO     | [payload] control thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:45,164 | INFO     | [data] control thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:45,589 | INFO     | [job] control thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:45,801 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:45,996 | INFO     | [job] validate thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:45,997 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:46,054 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:46,088 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:46,194 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:46,195 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:47,044 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:48,799 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:01:54,224 | INFO     | job.realtimelogging is not enabled
[2025-11-26 03:02:33] 2025-11-26 08:01:55,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:02:33] 2025-11-26 08:02:14,915 | INFO     | PID=8934 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 03:02:33] 2025-11-26 08:02:14,915 | INFO     | .. there are 2 such processes running
[2025-11-26 03:02:33] 2025-11-26 08:02:14,916 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:02:33] 2025-11-26 08:02:14,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:02:33] 2025-11-26 08:02:14,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:02:33] 2025-11-26 08:02:25,688 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:02:33] 2025-11-26 08:02:27,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379870283584)>', '<ExcThread(monitor, started 140379445778176)>']
[2025-11-26 03:02:33] 2025-11-26 08:02:27,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:02:33] 2025-11-26 08:02:27,977 | INFO     | [monitor] control thread has ended
[2025-11-26 03:02:33] 2025-11-26 08:02:32,747 | INFO     | all workflow threads have been joined
[2025-11-26 03:02:33] 2025-11-26 08:02:32,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:02:33] 2025-11-26 08:02:32,749 | INFO     | traces error code: 0
[2025-11-26 03:02:33] 2025-11-26 08:02:32,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:02:33] 2025-11-26 08:02:32,874 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:02:33] 2025-11-26 08:02:32,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:02:33] 2025-11-26 08:02:32,881 [wrapper] pilotpid: 8934
[2025-11-26 03:02:33] 2025-11-26 08:02:32,883 [wrapper] Pilot exit status: 0
[2025-11-26 03:02:33] 2025-11-26 08:02:32,895 [wrapper] pandaids: 6896713669
[2025-11-26 03:02:33] 2025-11-26 08:02:32,934 [wrapper] cleanup supervisor_pilot 25353 8935
[2025-11-26 03:02:33] 2025-11-26 08:02:32,937 [wrapper] Test setup, not cleaning
[2025-11-26 03:02:33] 2025-11-26 08:02:32,941 [wrapper] apfmon messages muted
[2025-11-26 03:02:33] 2025-11-26 08:02:32,944 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:02:33] 2025-11-26 08:02:32,947 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:02:33]  *** Error codes and diagnostics ***
[2025-11-26 03:02:33]     "exeErrorCode": 0,
[2025-11-26 03:02:33]     "exeErrorDiag": "",
[2025-11-26 03:02:33]     "pilotErrorCode": 0,
[2025-11-26 03:02:33]     "pilotErrorDiag": "",
[2025-11-26 03:02:33]  *** Listing of results directory ***
[2025-11-26 03:02:33] total 1295052
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 03:02:33] -rwx------ 1 boincer umatlas     36292 Nov 25 00:36 runpilot2-wrapper.sh
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 00:36 queuedata.json
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas       100 Nov 25 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:02:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 20:42 run_atlas
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas       105 Nov 25 20:42 job.xml
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas 411283513 Nov 25 20:42 EVNT.47483658._002106.pool.root.1
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:42 start_atlas.sh
[2025-11-26 03:02:33] drwxrwx--x 2 boincer umatlas      4096 Nov 25 20:42 shared
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 20:42 input.tar.gz
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas         0 Nov 25 20:42 boinc_lockfile
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 20:42 pandaJob.out
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas        57 Nov 25 20:42 setup.sh.local
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas    991877 Nov 25 20:42 agis_schedconf.cvmfs.json
[2025-11-26 03:02:33] drwx------ 5 boincer umatlas      4096 Nov 25 20:42 pilot3
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas       532 Nov 26 02:56 boinc_task_state.xml
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas 901066799 Nov 26 03:00 HITS.47556161._000895.pool.root.1
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas      1058 Nov 26 03:01 memory_monitor_summary.json
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas   1516240 Nov 26 03:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas   1693811 Nov 26 03:01 log.47556161._000895.job.log.tgz.1
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas      8662 Nov 26 03:01 heartbeat.json
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas      6137 Nov 26 03:02 init_data.xml
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 03:02 boinc_mmap_file
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas        95 Nov 26 03:02 pilot_heartbeat.json
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas        29 Nov 26 03:02 wrapper_checkpoint.txt
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas      4892 Nov 26 03:02 pilotlog.txt
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas   3237088 Nov 26 03:02 log.47556161._000895.job.log.1
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas       353 Nov 26 03:02 output.list
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas       620 Nov 26 03:02 runtime_log
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas   4945920 Nov 26 03:02 result.tar.gz
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas       665 Nov 26 03:02 uc6LDmlt0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXMJKDmCrYBum.diag
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 03:02 runtime_log.err
[2025-11-26 03:02:33] -rw-r--r-- 1 boincer umatlas     21283 Nov 26 03:02 stderr.txt
[2025-11-26 03:02:33] HITS file was successfully produced:
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas 901066799 Nov 26 03:00 shared/HITS.pool.root.1
[2025-11-26 03:02:33]  *** Contents of shared directory: ***
[2025-11-26 03:02:33] total 1287032
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas 411283513 Nov 25 20:42 ATLAS.root_0
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:42 start_atlas.sh
[2025-11-26 03:02:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 20:42 input.tar.gz
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas 901066799 Nov 26 03:00 HITS.pool.root.1
[2025-11-26 03:02:33] -rw------- 1 boincer umatlas   4945920 Nov 26 03:02 result.tar.gz
03:02:34 (5255): run_atlas exited; CPU time 176390.943586
03:02:34 (5255): called boinc_finish(0)

</stderr_txt>
]]>

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