Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:24 (3017935): wrapper (7.7.26015): starting
21:23:24 (3017935): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 21:23:24] Arguments: --nthreads 9
[2025-11-25 21:23:24] Threads: 9
[2025-11-25 21:23:24] Checking for CVMFS
[2025-11-25 21:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:23:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:23:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:23:25] 2.13.3.0 9262 29311 309812 153305 2 133 21691059 32935937 19305 16776704 0 148724216 99.774 83249075 33704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:23:25] CVMFS is ok
[2025-11-25 21:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:23:25] Further information can be found at the LHC@home message board.
[2025-11-25 21:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:23:25] Checking for apptainer binary...
[2025-11-25 21:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:23:25] Running /usr/bin/apptainer --version
[2025-11-25 21:23:25] apptainer version 1.4.4-1.el9
[2025-11-25 21:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:23:26] c-8-32.aglt2.org
[2025-11-25 21:23:26] apptainer works
[2025-11-25 21:23:26] Set ATHENA_PROC_NUMBER=9
[2025-11-25 21:23:26] Set ATHENA_CORE_NUMBER=9
[2025-11-25 21:23:26] Starting ATLAS job with PandaID=6895884172
[2025-11-25 21:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:13:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:13:18] 2025-11-27 00:12:25,042 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:13:18] 2025-11-27 00:12:25,048 | INFO     | sum of square deviations: 659473508064.4668
[2025-11-26 19:13:18] 2025-11-27 00:12:25,141 | INFO     | sum of deviations: 4477067541586.299
[2025-11-26 19:13:18] 2025-11-27 00:12:25,142 | INFO     | mean x: 1764163079.3849144
[2025-11-26 19:13:18] 2025-11-27 00:12:25,142 | INFO     | mean y: 3091808.819595645
[2025-11-26 19:13:18] 2025-11-27 00:12:25,142 | INFO     | intersect: -11973548896.521729
[2025-11-26 19:13:18] 2025-11-27 00:12:25,144 | INFO     | chi2: 8.892655791032427
[2025-11-26 19:13:18] 2025-11-27 00:12:25,149 | INFO     | sum of square deviations: 651811506833.0367
[2025-11-26 19:13:18] 2025-11-27 00:12:25,203 | INFO     | monitor loop #4849: job 0:6895884172 is in state 'finished'
[2025-11-26 19:13:18] 2025-11-27 00:12:25,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,273 | INFO     | sum of deviations: 4951434333495.55
[2025-11-26 19:13:18] 2025-11-27 00:12:25,273 | INFO     | mean x: 1764162926.8883684
[2025-11-26 19:13:18] 2025-11-27 00:12:25,273 | INFO     | mean y: 3101249.1647150666
[2025-11-26 19:13:18] 2025-11-27 00:12:25,273 | INFO     | intersect: -13398222284.561417
[2025-11-26 19:13:18] 2025-11-27 00:12:25,278 | INFO     | chi2: 5.556278133148162
[2025-11-26 19:13:18] 2025-11-27 00:12:25,279 | INFO     | current chi2=5.556278133148162 (change=37.51834925679627 %)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,281 | INFO     | sum of square deviations: 644209088114.0745
[2025-11-26 19:13:18] 2025-11-27 00:12:25,350 | INFO     | sum of deviations: 5301979888180.727
[2025-11-26 19:13:18] 2025-11-27 00:12:25,351 | INFO     | mean x: 1764162774.3918495
[2025-11-26 19:13:18] 2025-11-27 00:12:25,351 | INFO     | mean y: 3108275.396551724
[2025-11-26 19:13:18] 2025-11-27 00:12:25,351 | INFO     | intersect: -14516332263.210693
[2025-11-26 19:13:18] 2025-11-27 00:12:25,356 | INFO     | chi2: 3.3980827762746264
[2025-11-26 19:13:18] 2025-11-27 00:12:25,356 | INFO     | current chi2=3.3980827762746264 (change=38.84246441872613 %)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,358 | INFO     | sum of square deviations: 636665941753.8705
[2025-11-26 19:13:18] 2025-11-27 00:12:25,396 | INFO     | sum of deviations: 5363124058570.241
[2025-11-26 19:13:18] 2025-11-27 00:12:25,397 | INFO     | mean x: 1764162621.8945713
[2025-11-26 19:13:18] 2025-11-27 00:12:25,397 | INFO     | mean y: 3109509.1211644374
[2025-11-26 19:13:18] 2025-11-27 00:12:25,397 | INFO     | intersect: -14857781234.695059
[2025-11-26 19:13:18] 2025-11-27 00:12:25,399 | INFO     | chi2: 3.1930758925387432
[2025-11-26 19:13:18] 2025-11-27 00:12:25,399 | INFO     | current chi2=3.1930758925387432 (change=6.033016180984136 %)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,399 | INFO     | right removable region: 1270
[2025-11-26 19:13:18] 2025-11-27 00:12:25,401 | INFO     | sum of square deviations: 651810812653.0365
[2025-11-26 19:13:18] 2025-11-27 00:12:25,443 | INFO     | sum of deviations: 4012433511734.3535
[2025-11-26 19:13:18] 2025-11-27 00:12:25,443 | INFO     | mean x: 1764163231.8883684
[2025-11-26 19:13:18] 2025-11-27 00:12:25,443 | INFO     | mean y: 3101052.037470726
[2025-11-26 19:13:18] 2025-11-27 00:12:25,447 | INFO     | intersect: -10856779659.340748
[2025-11-26 19:13:18] 2025-11-27 00:12:25,449 | INFO     | chi2: 6.010892137412941
[2025-11-26 19:13:18] 2025-11-27 00:12:25,449 | INFO     | current chi2=6.010892137412941 (change=32.40610815641293 %)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,451 | INFO     | sum of square deviations: 644208090462.974
[2025-11-26 19:13:18] 2025-11-27 00:12:25,546 | INFO     | sum of deviations: 3905329798660.3623
[2025-11-26 19:13:18] 2025-11-27 00:12:25,546 | INFO     | mean x: 1764163384.387931
[2025-11-26 19:13:18] 2025-11-27 00:12:25,546 | INFO     | mean y: 3103199.84169279
[2025-11-26 19:13:18] 2025-11-27 00:12:25,547 | INFO     | intersect: -10691639596.394093
[2025-11-26 19:13:18] 2025-11-27 00:12:25,548 | INFO     | chi2: 5.9602092962753135
[2025-11-26 19:13:18] 2025-11-27 00:12:25,549 | INFO     | current chi2=5.9602092962753135 (change=0.8431833408250257 %)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,549 | INFO     | left removable region: 20
[2025-11-26 19:13:18] 2025-11-27 00:12:25,557 | INFO     | sum of square deviations: 605626287832.983
[2025-11-26 19:13:18] 2025-11-27 00:12:25,638 | INFO     | sum of deviations: 4640658099362.972
[2025-11-26 19:13:18] 2025-11-27 00:12:25,638 | INFO     | mean x: 1764163201.396
[2025-11-26 19:13:18] 2025-11-27 00:12:25,638 | INFO     | mean y: 3123969.9536
[2025-11-26 19:13:18] 2025-11-27 00:12:25,638 | INFO     | intersect: -13514912505.065128
[2025-11-26 19:13:18] 2025-11-27 00:12:25,640 | INFO     | chi2: 0.2135798456132227
[2025-11-26 19:13:18] 2025-11-27 00:12:25,640 | INFO     | current memory leak: 7.66 B/s (using 1250 data points, chi2=0.21)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | could have reported an average CPU frequency of 2599 MHz (46 samples)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | ..............................
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . Timing measurements:
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . get job = 0 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . initial setup = 3 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . payload setup = 18 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . stage-in = 0 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . payload execution = 78442 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . stage-out = 6 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,645 | INFO     | . log creation = 2 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,646 | INFO     | ..............................
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | 
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | job summary report
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | --------------------------------------------------
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | PanDA job id: 6895884172
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | task id: 47556149
[2025-11-26 19:13:18] 2025-11-27 00:12:25,823 | INFO     | errors: (none)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | pilot state: finished 
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | transexitcode: 0
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | exeerrorcode: 0
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | exeerrordiag: 
[2025-11-26 19:13:18] 2025-11-27 00:12:25,824 | INFO     | exitcode: 0
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | exitmsg: OK
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | cpuconsumptiontime: 311692 s
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | nevents: 1000
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | neventsw: 0
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | pid: 3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | pgrp: 3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:25,825 | INFO     | corecount: 9
[2025-11-26 19:13:18] 2025-11-27 00:12:25,826 | INFO     | event service: False
[2025-11-26 19:13:18] 2025-11-27 00:12:25,826 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284633, 78464: 2346965, 78471: 2355959, 78474: 2356015, 78492: 2356389}
[2025-11-26 19:13:18] 2025-11-27 00:12:25,826 | INFO     | --------------------------------------------------
[2025-11-26 19:13:18] 2025-11-27 00:12:25,826 | INFO     | 
[2025-11-26 19:13:18] 2025-11-27 00:12:25,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 19:13:18] 2025-11-27 00:12:25,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:13:18] 2025-11-27 00:12:25,878 | INFO     | job 6895884172 has completed (purged errors)
[2025-11-26 19:13:18] 2025-11-27 00:12:25,878 | INFO     | overall cleanup function is called
[2025-11-26 19:13:18] 2025-11-27 00:12:26,907 | INFO     | --- collectZombieJob: --- 10, [3030109]
[2025-11-26 19:13:18] 2025-11-27 00:12:26,908 | INFO     | zombie collector waiting for pid 3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:26,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:13:18] 2025-11-27 00:12:26,908 | INFO     | collected zombie processes
[2025-11-26 19:13:18] 2025-11-27 00:12:26,908 | INFO     | will attempt to kill all subprocesses of pid=3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:27,532 | INFO     | process IDs to be killed: [3030109] (in reverse order)
[2025-11-26 19:13:18] 2025-11-27 00:12:27,692 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:13:18] 2025-11-27 00:12:27,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:13:18] 2025-11-27 00:12:27,710 | INFO     | did not find any defunct processes belonging to 3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:27,739 | INFO     | did not find any defunct processes belonging to 3030109
[2025-11-26 19:13:18] 2025-11-27 00:12:27,744 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:13:18] 2025-11-27 00:12:27,745 | INFO     | ready for new job
[2025-11-26 19:13:18] 2025-11-27 00:12:27,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:13:18] 2025-11-27 00:12:27,755 | INFO     | ***************************************
[2025-11-26 19:13:18] 2025-11-27 00:12:27,755 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:13:18] 2025-11-27 00:12:27,755 | INFO     | ***************************************
[2025-11-26 19:13:18] 2025-11-27 00:12:27,756 | INFO     | 
[2025-11-26 19:13:18] 2025-11-27 00:12:27,759 | INFO     | architecture information:
[2025-11-26 19:13:18] 2025-11-27 00:12:27,778 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:13:18] 2025-11-27 00:12:27,828 | INFO     | cat /etc/os-release:
[2025-11-26 19:13:18] NAME="CentOS Linux"
[2025-11-26 19:13:18] VERSION="7 (Core)"
[2025-11-26 19:13:18] ID="centos"
[2025-11-26 19:13:18] ID_LIKE="rhel fedora"
[2025-11-26 19:13:18] VERSION_ID="7"
[2025-11-26 19:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:13:18] ANSI_COLOR="0;31"
[2025-11-26 19:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:13:18] HOME_URL="https://www.centos.org/"
[2025-11-26 19:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:13:18] 
[2025-11-26 19:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:13:18] 
[2025-11-26 19:13:18] 2025-11-27 00:12:27,828 | INFO     | ***************************************
[2025-11-26 19:13:18] 2025-11-27 00:12:28,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 19:13:18] 2025-11-27 00:12:28,430 | INFO     | sufficient remaining disk space (71531757568 B)
[2025-11-26 19:13:18] 2025-11-27 00:12:28,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:13:18] 2025-11-27 00:12:28,430 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:13:18] 2025-11-27 00:12:28,430 | INFO     | update_server=False
[2025-11-26 19:13:18] 2025-11-27 00:12:28,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:13:18] 2025-11-27 00:12:28,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:13:18] 2025-11-27 00:12:28,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:13:18] 2025-11-27 00:12:28,537 | INFO     | all data control threads have been joined
[2025-11-26 19:13:18] 2025-11-27 00:12:28,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:13:18] 2025-11-27 00:12:28,719 | INFO     | aborting loop
[2025-11-26 19:13:18] 2025-11-27 00:12:28,782 | INFO     | all payload control threads have been joined
[2025-11-26 19:13:18] 2025-11-27 00:12:29,438 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,545 | INFO     | [data] control thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,725 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,725 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,771 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,778 | INFO     | all job control threads have been joined
[2025-11-26 19:13:18] 2025-11-27 00:12:29,788 | INFO     | [payload] control thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,874 | INFO     | [job] validate thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:29,975 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,318 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,341 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,439 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,527 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,613 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,785 | INFO     | [job] control thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:30,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:13:18] 2025-11-27 00:12:31,927 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:32,442 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:13:18] 2025-11-27 00:12:58,667 | INFO     | PID=3023202 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:13:18] 2025-11-27 00:12:58,668 | INFO     | .. there are 38 such processes running
[2025-11-26 19:13:18] 2025-11-27 00:12:58,669 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:13:18] 2025-11-27 00:12:58,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:13:18] 2025-11-27 00:12:58,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:13:18] 2025-11-27 00:13:12,142 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:13:18] 2025-11-27 00:13:12,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374014326592)>', '<ExcThread(monitor, started 140373666023168)>']
[2025-11-26 19:13:18] 2025-11-27 00:13:12,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:13:18] 2025-11-27 00:13:12,772 | INFO     | [monitor] control thread has ended
[2025-11-26 19:13:18] 2025-11-27 00:13:17,514 | INFO     | all workflow threads have been joined
[2025-11-26 19:13:18] 2025-11-27 00:13:17,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:13:18] 2025-11-27 00:13:17,515 | INFO     | traces error code: 0
[2025-11-26 19:13:18] 2025-11-27 00:13:17,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:13:18] 2025-11-27 00:13:17,797 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:13:18] 2025-11-27 00:13:17,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:13:18] 2025-11-27 00:13:17,827 [wrapper] pilotpid: 3023202
[2025-11-26 19:13:18] 2025-11-27 00:13:17,846 [wrapper] Pilot exit status: 0
[2025-11-26 19:13:18] 2025-11-27 00:13:17,923 [wrapper] pandaids: 6895884172
[2025-11-26 19:13:18] 2025-11-27 00:13:18,195 [wrapper] cleanup supervisor_pilot 3740614 3023203
[2025-11-26 19:13:18] 2025-11-27 00:13:18,269 [wrapper] Test setup, not cleaning
[2025-11-26 19:13:18] 2025-11-27 00:13:18,285 [wrapper] apfmon messages muted
[2025-11-26 19:13:18] 2025-11-27 00:13:18,300 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:13:18] 2025-11-27 00:13:18,315 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:13:18]  *** Error codes and diagnostics ***
[2025-11-26 19:13:18]     "exeErrorCode": 0,
[2025-11-26 19:13:18]     "exeErrorDiag": "",
[2025-11-26 19:13:18]     "pilotErrorCode": 0,
[2025-11-26 19:13:18]     "pilotErrorDiag": "",
[2025-11-26 19:13:18]  *** Listing of results directory ***
[2025-11-26 19:13:18] total 1346188
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:06 queuedata.json
[2025-11-26 19:13:18] -rwx------. 1 boincer umatlas     36292 Nov 24 12:09 runpilot2-wrapper.sh
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:13:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:23 run_atlas
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:23 job.xml
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas 412920216 Nov 25 21:23 EVNT.47483658._001401.pool.root.1
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:23 start_atlas.sh
[2025-11-26 19:13:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:23 shared
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 21:23 input.tar.gz
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:23 boinc_lockfile
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 21:23 pandaJob.out
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas        57 Nov 25 21:23 setup.sh.local
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas    991877 Nov 25 21:23 agis_schedconf.cvmfs.json
[2025-11-26 19:13:18] drwx------. 5 boincer umatlas      4096 Nov 25 21:23 pilot3
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:56 boinc_task_state.xml
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas      6709 Nov 26 19:10 init_data.xml
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas 936587367 Nov 26 19:11 HITS.47556149._003875.pool.root.1
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas      1069 Nov 26 19:11 memory_monitor_summary.json
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas   2472533 Nov 26 19:12 log.47556149._003875.job.log.tgz.1
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas      8656 Nov 26 19:12 heartbeat.json
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas        95 Nov 26 19:12 pilot_heartbeat.json
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:13 boinc_mmap_file
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:13 wrapper_checkpoint.txt
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas      4824 Nov 26 19:13 pilotlog.txt
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas  10059753 Nov 26 19:13 log.47556149._003875.job.log.1
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas       353 Nov 26 19:13 output.list
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:13 runtime_log
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas  12554240 Nov 26 19:13 result.tar.gz
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas       662 Nov 26 19:13 YBBNDm8Eph8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmp8IKDm86WBkn.diag
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 19:13 runtime_log.err
[2025-11-26 19:13:18] -rw-r--r--. 1 boincer umatlas     21157 Nov 26 19:13 stderr.txt
[2025-11-26 19:13:18] HITS file was successfully produced:
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas 936587367 Nov 26 19:11 shared/HITS.pool.root.1
[2025-11-26 19:13:18]  *** Contents of shared directory: ***
[2025-11-26 19:13:18] total 1330748
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas 412920216 Nov 25 21:23 ATLAS.root_0
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:23 start_atlas.sh
[2025-11-26 19:13:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 21:23 input.tar.gz
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas 936587367 Nov 26 19:11 HITS.pool.root.1
[2025-11-26 19:13:18] -rw-------. 1 boincer umatlas  12554240 Nov 26 19:13 result.tar.gz
19:13:20 (3017935): run_atlas exited; CPU time 313669.367395
19:13:20 (3017935): called boinc_finish(0)

</stderr_txt>
]]>

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