Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:25 (638086): wrapper (7.7.26015): starting
21:22:25 (638086): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:22:25] Arguments: --nthreads 8
[2025-11-25 21:22:25] Threads: 8
[2025-11-25 21:22:25] Checking for CVMFS
[2025-11-25 21:22:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:22:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:22:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:22:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:22:27] 2.13.3.0 9702 29446 318824 153305 2 59 20513342 32935937 22301 16776704 0 151181275 99.701 107473427 32862 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:22:27] CVMFS is ok
[2025-11-25 21:22:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:22:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:22:27] Further information can be found at the LHC@home message board.
[2025-11-25 21:22:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:22:27] Checking for apptainer binary...
[2025-11-25 21:22:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:22:27] Running /usr/bin/apptainer --version
[2025-11-25 21:22:27] apptainer version 1.4.4-1.el9
[2025-11-25 21:22:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:22:28] c-4-37.aglt2.org
[2025-11-25 21:22:28] apptainer works
[2025-11-25 21:22:28] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:22:28] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:22:28] Starting ATLAS job with PandaID=6896713710
[2025-11-25 21:22:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:55:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:55:26] 2025-11-26 23:54:33,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:55:26] 2025-11-26 23:54:34,404 | INFO     | time since job start (77495s) is within the limit (172800.0s)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,283 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 18:55:26] 2025-11-26 23:54:35,290 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8441250000005
[2025-11-26 18:55:26] 2025-11-26 23:54:35,297 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6896713710/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,297 | INFO     | extracted standard info from prmon json
[2025-11-26 18:55:26] 2025-11-26 23:54:35,298 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:55:26] 2025-11-26 23:54:35,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:55:26] 2025-11-26 23:54:35,322 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:55:26] 2025-11-26 23:54:35,324 | INFO     | sum of square deviations: 635145038747.1215
[2025-11-26 18:55:26] 2025-11-26 23:54:35,366 | INFO     | sum of deviations: 3660966326916.0366
[2025-11-26 18:55:26] 2025-11-26 23:54:35,367 | INFO     | mean x: 1764162538.792126
[2025-11-26 18:55:26] 2025-11-26 23:54:35,367 | INFO     | mean y: 2960774.7236220473
[2025-11-26 18:55:26] 2025-11-26 23:54:35,367 | INFO     | intersect: -10165645221.892061
[2025-11-26 18:55:26] 2025-11-26 23:54:35,369 | INFO     | chi2: 8.627129771024165
[2025-11-26 18:55:26] 2025-11-26 23:54:35,371 | INFO     | sum of square deviations: 627673036346.2406
[2025-11-26 18:55:26] 2025-11-26 23:54:35,413 | INFO     | sum of deviations: 4101999969770.8916
[2025-11-26 18:55:26] 2025-11-26 23:54:35,413 | INFO     | mean x: 1764162386.297233
[2025-11-26 18:55:26] 2025-11-26 23:54:35,413 | INFO     | mean y: 2969775.311462451
[2025-11-26 18:55:26] 2025-11-26 23:54:35,413 | INFO     | intersect: -11526271782.342932
[2025-11-26 18:55:26] 2025-11-26 23:54:35,415 | INFO     | chi2: 5.434512828166629
[2025-11-26 18:55:26] 2025-11-26 23:54:35,415 | INFO     | current chi2=5.434512828166629 (change=37.006710546774656 %)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,417 | INFO     | sum of square deviations: 620259872257.7924
[2025-11-26 18:55:26] 2025-11-26 23:54:35,458 | INFO     | sum of deviations: 4358079435470.743
[2025-11-26 18:55:26] 2025-11-26 23:54:35,459 | INFO     | mean x: 1764162233.802381
[2025-11-26 18:55:26] 2025-11-26 23:54:35,459 | INFO     | mean y: 2975039.753968254
[2025-11-26 18:55:26] 2025-11-26 23:54:35,459 | INFO     | intersect: -12392408727.34688
[2025-11-26 18:55:26] 2025-11-26 23:54:35,461 | INFO     | chi2: 4.1181181735680585
[2025-11-26 18:55:26] 2025-11-26 23:54:35,461 | INFO     | current chi2=4.1181181735680585 (change=24.22286405831644 %)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,461 | INFO     | right removable region: 1259
[2025-11-26 18:55:26] 2025-11-26 23:54:35,463 | INFO     | sum of square deviations: 627672035336.2408
[2025-11-26 18:55:26] 2025-11-26 23:54:35,504 | INFO     | sum of deviations: 3198510655645.957
[2025-11-26 18:55:26] 2025-11-26 23:54:35,505 | INFO     | mean x: 1764162691.297233
[2025-11-26 18:55:26] 2025-11-26 23:54:35,505 | INFO     | mean y: 2970208.5027667983
[2025-11-26 18:55:26] 2025-11-26 23:54:35,505 | INFO     | intersect: -8986904835.690472
[2025-11-26 18:55:26] 2025-11-26 23:54:35,507 | INFO     | chi2: 5.3866367485326645
[2025-11-26 18:55:26] 2025-11-26 23:54:35,507 | INFO     | current chi2=5.3866367485326645 (change=37.561658494755754 %)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,509 | INFO     | sum of square deviations: 620258178660.1996
[2025-11-26 18:55:26] 2025-11-26 23:54:35,552 | INFO     | sum of deviations: 3064869949556.751
[2025-11-26 18:55:26] 2025-11-26 23:54:35,553 | INFO     | mean x: 1764162843.7992063
[2025-11-26 18:55:26] 2025-11-26 23:54:35,553 | INFO     | mean y: 2972954.75
[2025-11-26 18:55:26] 2025-11-26 23:54:35,553 | INFO     | intersect: -8714251375.550825
[2025-11-26 18:55:26] 2025-11-26 23:54:35,555 | INFO     | chi2: 5.137983270989201
[2025-11-26 18:55:26] 2025-11-26 23:54:35,555 | INFO     | current chi2=5.137983270989201 (change=4.6161174244986425 %)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,555 | INFO     | left removable region: 20
[2025-11-26 18:55:26] 2025-11-26 23:54:35,557 | INFO     | sum of square deviations: 589758762407.2396
[2025-11-26 18:55:26] 2025-11-26 23:54:35,597 | INFO     | sum of deviations: 3673766495252.2026
[2025-11-26 18:55:26] 2025-11-26 23:54:35,597 | INFO     | mean x: 1764162813.31477
[2025-11-26 18:55:26] 2025-11-26 23:54:35,597 | INFO     | mean y: 2990920.414850686
[2025-11-26 18:55:26] 2025-11-26 23:54:35,597 | INFO     | intersect: -10986455356.349972
[2025-11-26 18:55:26] 2025-11-26 23:54:35,599 | INFO     | chi2: 0.42702567598279784
[2025-11-26 18:55:26] 2025-11-26 23:54:35,599 | INFO     | current memory leak: 6.23 B/s (using 1239 data points, chi2=0.43)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,600 | INFO     | could have reported an average CPU frequency of 2599 MHz (46 samples)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | ..............................
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . Timing measurements:
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . get job = 0 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . initial setup = 3 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . payload setup = 16 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . stage-in = 0 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,601 | INFO     | . payload execution = 77442 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,602 | INFO     | . stage-out = 4 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,602 | INFO     | . log creation = 0 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,602 | INFO     | ..............................
[2025-11-26 18:55:26] 2025-11-26 23:54:35,710 | INFO     | 
[2025-11-26 18:55:26] 2025-11-26 23:54:35,710 | INFO     | job summary report
[2025-11-26 18:55:26] 2025-11-26 23:54:35,710 | INFO     | --------------------------------------------------
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | PanDA job id: 6896713710
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | task id: 47556173
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | errors: (none)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | pilot state: finished 
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | transexitcode: 0
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | exeerrorcode: 0
[2025-11-26 18:55:26] 2025-11-26 23:54:35,711 | INFO     | exeerrordiag: 
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | exitcode: 0
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | exitmsg: OK
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | cpuconsumptiontime: 297443 s
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | nevents: 1000
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | neventsw: 0
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | pid: 649308
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | pgrp: 649308
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | corecount: 8
[2025-11-26 18:55:26] 2025-11-26 23:54:35,712 | INFO     | event service: False
[2025-11-26 18:55:26] 2025-11-26 23:54:35,713 | INFO     | sizes: {0: 2284312, 1: 2284312, 10: 2284602, 11: 2284630, 77462: 2345320, 77466: 2354314, 77467: 2354498, 77473: 2354744}
[2025-11-26 18:55:26] 2025-11-26 23:54:35,713 | INFO     | --------------------------------------------------
[2025-11-26 18:55:26] 2025-11-26 23:54:35,713 | INFO     | 
[2025-11-26 18:55:26] 2025-11-26 23:54:35,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 18:55:26] 2025-11-26 23:54:35,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:55:26] 2025-11-26 23:54:35,737 | INFO     | job 6896713710 has completed (purged errors)
[2025-11-26 18:55:26] 2025-11-26 23:54:35,737 | INFO     | overall cleanup function is called
[2025-11-26 18:55:26] 2025-11-26 23:54:36,755 | INFO     | --- collectZombieJob: --- 10, [649308]
[2025-11-26 18:55:26] 2025-11-26 23:54:36,755 | INFO     | zombie collector waiting for pid 649308
[2025-11-26 18:55:26] 2025-11-26 23:54:36,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:55:26] 2025-11-26 23:54:36,755 | INFO     | collected zombie processes
[2025-11-26 18:55:26] 2025-11-26 23:54:36,755 | INFO     | will attempt to kill all subprocesses of pid=649308
[2025-11-26 18:55:26] 2025-11-26 23:54:37,197 | INFO     | process IDs to be killed: [649308] (in reverse order)
[2025-11-26 18:55:26] 2025-11-26 23:54:37,349 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:55:26] 2025-11-26 23:54:37,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:55:26] 2025-11-26 23:54:37,370 | INFO     | did not find any defunct processes belonging to 649308
[2025-11-26 18:55:26] 2025-11-26 23:54:37,387 | INFO     | did not find any defunct processes belonging to 649308
[2025-11-26 18:55:26] 2025-11-26 23:54:37,388 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:55:26] 2025-11-26 23:54:37,389 | INFO     | ready for new job
[2025-11-26 18:55:26] 2025-11-26 23:54:37,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:55:26] 2025-11-26 23:54:37,395 | INFO     | ***************************************
[2025-11-26 18:55:26] 2025-11-26 23:54:37,395 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:55:26] 2025-11-26 23:54:37,395 | INFO     | ***************************************
[2025-11-26 18:55:26] 2025-11-26 23:54:37,395 | INFO     | 
[2025-11-26 18:55:26] 2025-11-26 23:54:37,397 | INFO     | architecture information:
[2025-11-26 18:55:26] 2025-11-26 23:54:37,398 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:55:26] 2025-11-26 23:54:37,416 | INFO     | cat /etc/os-release:
[2025-11-26 18:55:26] NAME="CentOS Linux"
[2025-11-26 18:55:26] VERSION="7 (Core)"
[2025-11-26 18:55:26] ID="centos"
[2025-11-26 18:55:26] ID_LIKE="rhel fedora"
[2025-11-26 18:55:26] VERSION_ID="7"
[2025-11-26 18:55:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:55:26] ANSI_COLOR="0;31"
[2025-11-26 18:55:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:55:26] HOME_URL="https://www.centos.org/"
[2025-11-26 18:55:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:55:26] 
[2025-11-26 18:55:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:55:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:55:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:55:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:55:26] 
[2025-11-26 18:55:26] 2025-11-26 23:54:37,416 | INFO     | ***************************************
[2025-11-26 18:55:26] 2025-11-26 23:54:37,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 18:55:26] 2025-11-26 23:54:37,937 | INFO     | sufficient remaining disk space (72753348608 B)
[2025-11-26 18:55:26] 2025-11-26 23:54:37,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:55:26] 2025-11-26 23:54:37,938 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:55:26] 2025-11-26 23:54:37,938 | INFO     | update_server=False
[2025-11-26 18:55:26] 2025-11-26 23:54:37,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:55:26] 2025-11-26 23:54:37,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:55:26] 2025-11-26 23:54:37,938 | INFO     | aborting loop
[2025-11-26 18:55:26] 2025-11-26 23:54:38,449 | INFO     | all data control threads have been joined
[2025-11-26 18:55:26] 2025-11-26 23:54:38,564 | INFO     | all payload control threads have been joined
[2025-11-26 18:55:26] 2025-11-26 23:54:38,694 | INFO     | all job control threads have been joined
[2025-11-26 18:55:26] 2025-11-26 23:54:38,944 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:38,947 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:38,963 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:55:26] 2025-11-26 23:54:39,286 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:55:26] 2025-11-26 23:54:39,441 | INFO     | [job] validate thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,455 | INFO     | [data] control thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,553 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,570 | INFO     | [payload] control thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,700 | INFO     | [job] control thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,741 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,744 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:39,965 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:40,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:55:26] 2025-11-26 23:54:41,245 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:41,731 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:43,423 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:54:48,193 | INFO     | job.realtimelogging is not enabled
[2025-11-26 18:55:26] 2025-11-26 23:54:49,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:55:26] 2025-11-26 23:55:07,977 | INFO     | PID=642820 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:55:26] 2025-11-26 23:55:07,977 | INFO     | .. there are 40 such processes running
[2025-11-26 18:55:26] 2025-11-26 23:55:07,977 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:55:26] 2025-11-26 23:55:07,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:55:26] 2025-11-26 23:55:07,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:55:26] 2025-11-26 23:55:18,916 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:55:26] 2025-11-26 23:55:20,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872647313216)>', '<ExcThread(monitor, started 139871624611584)>']
[2025-11-26 18:55:26] 2025-11-26 23:55:21,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:55:26] 2025-11-26 23:55:21,059 | INFO     | [monitor] control thread has ended
[2025-11-26 18:55:26] 2025-11-26 23:55:25,778 | INFO     | all workflow threads have been joined
[2025-11-26 18:55:26] 2025-11-26 23:55:25,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:55:26] 2025-11-26 23:55:25,778 | INFO     | traces error code: 0
[2025-11-26 18:55:26] 2025-11-26 23:55:25,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:55:26] 2025-11-26 23:55:26,041 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:55:26] 2025-11-26 23:55:26,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:55:26] 2025-11-26 23:55:26,046 [wrapper] pilotpid: 642820
[2025-11-26 18:55:26] 2025-11-26 23:55:26,048 [wrapper] Pilot exit status: 0
[2025-11-26 18:55:26] 2025-11-26 23:55:26,060 [wrapper] pandaids: 6896713710
[2025-11-26 18:55:26] 2025-11-26 23:55:26,128 [wrapper] cleanup supervisor_pilot 1180950 642821
[2025-11-26 18:55:26] 2025-11-26 23:55:26,132 [wrapper] Test setup, not cleaning
[2025-11-26 18:55:26] 2025-11-26 23:55:26,134 [wrapper] apfmon messages muted
[2025-11-26 18:55:26] 2025-11-26 23:55:26,137 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:55:26] 2025-11-26 23:55:26,140 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:55:26]  *** Error codes and diagnostics ***
[2025-11-26 18:55:26]     "exeErrorCode": 0,
[2025-11-26 18:55:26]     "exeErrorDiag": "",
[2025-11-26 18:55:26]     "pilotErrorCode": 0,
[2025-11-26 18:55:26]     "pilotErrorDiag": "",
[2025-11-26 18:55:26]  *** Listing of results directory ***
[2025-11-26 18:55:26] total 1335248
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:36 queuedata.json
[2025-11-26 18:55:26] -rwx------. 1 boincer umatlas     36292 Nov 25 00:40 runpilot2-wrapper.sh
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:55:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:22 run_atlas
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:22 job.xml
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas 410272888 Nov 25 21:22 EVNT.47483658._003067.pool.root.1
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:22 start_atlas.sh
[2025-11-26 18:55:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:22 shared
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 21:22 input.tar.gz
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:22 boinc_lockfile
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 21:22 pandaJob.out
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas        57 Nov 25 21:22 setup.sh.local
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas    991877 Nov 25 21:22 agis_schedconf.cvmfs.json
[2025-11-26 18:55:26] drwx------. 5 boincer umatlas      4096 Nov 25 21:22 pilot3
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:38 boinc_task_state.xml
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas      6662 Nov 26 18:46 init_data.xml
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas 928439819 Nov 26 18:53 HITS.47556173._000500.pool.root.1
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas      1061 Nov 26 18:54 memory_monitor_summary.json
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:54 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas   2351035 Nov 26 18:54 log.47556173._000500.job.log.tgz.1
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas        95 Nov 26 18:54 pilot_heartbeat.json
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas      8616 Nov 26 18:54 heartbeat.json
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:55 wrapper_checkpoint.txt
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:55 boinc_mmap_file
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas      4895 Nov 26 18:55 pilotlog.txt
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas   9980309 Nov 26 18:55 log.47556173._000500.job.log.1
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas       353 Nov 26 18:55 output.list
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:55 runtime_log
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas  12349440 Nov 26 18:55 result.tar.gz
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 18:55 runtime_log.err
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas       658 Nov 26 18:55 IADMDmdx0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtMJKDmiDLQLm.diag
[2025-11-26 18:55:26] -rw-r--r--. 1 boincer umatlas     21294 Nov 26 18:55 stderr.txt
[2025-11-26 18:55:26] HITS file was successfully produced:
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas 928439819 Nov 26 18:53 shared/HITS.pool.root.1
[2025-11-26 18:55:26]  *** Contents of shared directory: ***
[2025-11-26 18:55:26] total 1320004
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas 410272888 Nov 25 21:22 ATLAS.root_0
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:22 start_atlas.sh
[2025-11-26 18:55:26] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 21:22 input.tar.gz
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas 928439819 Nov 26 18:53 HITS.pool.root.1
[2025-11-26 18:55:26] -rw-------. 1 boincer umatlas  12349440 Nov 26 18:55 result.tar.gz
18:55:27 (638086): run_atlas exited; CPU time 299728.532992
18:55:27 (638086): called boinc_finish(0)

</stderr_txt>
]]>

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