Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:29 (992792): wrapper (7.7.26015): starting
21:30:29 (992792): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:30:29] Arguments: --nthreads 8
[2025-11-25 21:30:29] Threads: 8
[2025-11-25 21:30:29] Checking for CVMFS
[2025-11-25 21:30:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:30:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:30:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:30:29] 2.13.3.0 7489 29452 372892 153305 1 394 20188525 32935937 23015 16776704 0 189897211 99.647 180908468 41354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:30:29] CVMFS is ok
[2025-11-25 21:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:30:29] Further information can be found at the LHC@home message board.
[2025-11-25 21:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:30:29] Checking for apptainer binary...
[2025-11-25 21:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:30:29] Running /usr/bin/apptainer --version
[2025-11-25 21:30:29] apptainer version 1.4.4-1.el9
[2025-11-25 21:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:30:30] c7-13-32.aglt2.org
[2025-11-25 21:30:30] apptainer works
[2025-11-25 21:30:30] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:30:30] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:30:30] Starting ATLAS job with PandaID=6896577838
[2025-11-25 21:30:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:18:29]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:18:29] 2025-11-27 04:17:27,911 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:18:29] 2025-11-27 04:17:27,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:18:29] 2025-11-27 04:17:27,926 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:18:29] 2025-11-27 04:17:27,928 | INFO     | sum of square deviations: 1091099642581.5358
[2025-11-26 23:18:29] 2025-11-27 04:17:27,965 | INFO     | sum of deviations: 3906011946622.447
[2025-11-26 23:18:29] 2025-11-27 04:17:27,966 | INFO     | mean x: 1764170631.6166995
[2025-11-26 23:18:29] 2025-11-27 04:17:27,966 | INFO     | mean y: 2959472.619986851
[2025-11-26 23:18:29] 2025-11-27 04:17:27,966 | INFO     | intersect: -6312569645.024605
[2025-11-26 23:18:29] 2025-11-27 04:17:27,967 | INFO     | chi2: 8.962623857091726
[2025-11-26 23:18:29] 2025-11-27 04:17:27,968 | INFO     | sum of square deviations: 1080374871764.6271
[2025-11-26 23:18:29] 2025-11-27 04:17:28,013 | INFO     | sum of deviations: 4450214786869.209
[2025-11-26 23:18:29] 2025-11-27 04:17:28,013 | INFO     | mean x: 1764170479.1187334
[2025-11-26 23:18:29] 2025-11-27 04:17:28,013 | INFO     | mean y: 2967210.298812665
[2025-11-26 23:18:29] 2025-11-27 04:17:28,013 | INFO     | intersect: -7263897058.683137
[2025-11-26 23:18:29] 2025-11-27 04:17:28,014 | INFO     | chi2: 5.5819957183699085
[2025-11-26 23:18:29] 2025-11-27 04:17:28,014 | INFO     | current chi2=5.5819957183699085 (change=37.71917903312295 %)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,016 | INFO     | sum of square deviations: 1069720613897.7067
[2025-11-26 23:18:29] 2025-11-27 04:17:28,060 | INFO     | sum of deviations: 4895948725523.825
[2025-11-26 23:18:29] 2025-11-27 04:17:28,060 | INFO     | mean x: 1764170326.620781
[2025-11-26 23:18:29] 2025-11-27 04:17:28,060 | INFO     | mean y: 2973587.2091330243
[2025-11-26 23:18:29] 2025-11-27 04:17:28,060 | INFO     | intersect: -8071365964.643155
[2025-11-26 23:18:29] 2025-11-27 04:17:28,061 | INFO     | chi2: 3.112072516984912
[2025-11-26 23:18:29] 2025-11-27 04:17:28,061 | INFO     | current chi2=3.112072516984912 (change=44.24803109856701 %)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,062 | INFO     | sum of square deviations: 1059136636418.2738
[2025-11-26 23:18:29] 2025-11-27 04:17:28,106 | INFO     | sum of deviations: 5164479092740.993
[2025-11-26 23:18:29] 2025-11-27 04:17:28,106 | INFO     | mean x: 1764170174.122842
[2025-11-26 23:18:29] 2025-11-27 04:17:28,106 | INFO     | mean y: 2977455.962151394
[2025-11-26 23:18:29] 2025-11-27 04:17:28,106 | INFO     | intersect: -8599330940.342379
[2025-11-26 23:18:29] 2025-11-27 04:17:28,107 | INFO     | chi2: 2.167430619313649
[2025-11-26 23:18:29] 2025-11-27 04:17:28,107 | INFO     | current chi2=2.167430619313649 (change=30.354109440433795 %)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,109 | INFO     | sum of square deviations: 1048622706763.8276
[2025-11-26 23:18:29] 2025-11-27 04:17:28,152 | INFO     | sum of deviations: 5250570392455.199
[2025-11-26 23:18:29] 2025-11-27 04:17:28,152 | INFO     | mean x: 1764170021.6249168
[2025-11-26 23:18:29] 2025-11-27 04:17:28,152 | INFO     | mean y: 2978703.620253165
[2025-11-26 23:18:29] 2025-11-27 04:17:28,152 | INFO     | intersect: -8830416590.085743
[2025-11-26 23:18:29] 2025-11-27 04:17:28,153 | INFO     | chi2: 1.9756028435167996
[2025-11-26 23:18:29] 2025-11-27 04:17:28,154 | INFO     | current chi2=1.9756028435167996 (change=8.850469034048936 %)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,154 | INFO     | right removable region: 1500
[2025-11-26 23:18:29] 2025-11-27 04:17:28,155 | INFO     | sum of square deviations: 1080374299584.6273
[2025-11-26 23:18:29] 2025-11-27 04:17:28,199 | INFO     | sum of deviations: 3547172751520.479
[2025-11-26 23:18:29] 2025-11-27 04:17:28,200 | INFO     | mean x: 1764170784.1187334
[2025-11-26 23:18:29] 2025-11-27 04:17:28,200 | INFO     | mean y: 2964569.0639841687
[2025-11-26 23:18:29] 2025-11-27 04:17:28,200 | INFO     | intersect: -5789304403.698917
[2025-11-26 23:18:29] 2025-11-27 04:17:28,201 | INFO     | chi2: 7.1652981021967195
[2025-11-26 23:18:29] 2025-11-27 04:17:28,201 | INFO     | current chi2=7.1652981021967195 (change=20.053566718331737 %)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,201 | INFO     | left removable region: 10
[2025-11-26 23:18:29] 2025-11-27 04:17:28,203 | INFO     | sum of square deviations: 1025736521464.5162
[2025-11-26 23:18:29] 2025-11-27 04:17:28,241 | INFO     | sum of deviations: 4817849065238.086
[2025-11-26 23:18:29] 2025-11-27 04:17:28,241 | INFO     | mean x: 1764170296.128188
[2025-11-26 23:18:29] 2025-11-27 04:17:28,241 | INFO     | mean y: 2985056.66442953
[2025-11-26 23:18:29] 2025-11-27 04:17:28,241 | INFO     | intersect: -8283261980.719639
[2025-11-26 23:18:29] 2025-11-27 04:17:28,242 | INFO     | chi2: 0.13543560769689883
[2025-11-26 23:18:29] 2025-11-27 04:17:28,242 | INFO     | current memory leak: 4.70 B/s (using 1490 data points, chi2=0.14)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | could have reported an average CPU frequency of 3290 MHz (54 samples)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | ..............................
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . Timing measurements:
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . get job = 0 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . initial setup = 2 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . payload setup = 7 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . stage-in = 0 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . payload execution = 92764 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . stage-out = 3 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | . log creation = 1 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,243 | INFO     | ..............................
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | 
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | job summary report
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | --------------------------------------------------
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | PanDA job id: 6896577838
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | task id: 47556161
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | errors: (none)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | pilot state: finished 
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | transexitcode: 0
[2025-11-26 23:18:29] 2025-11-27 04:17:28,311 | INFO     | exeerrorcode: 0
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | exeerrordiag: 
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | exitcode: 0
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | exitmsg: OK
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | cpuconsumptiontime: 198184 s
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | nevents: 1000
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | neventsw: 0
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | pid: 1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | pgrp: 1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | corecount: 8
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | event service: False
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | sizes: {0: 2284262, 5: 2284524, 11: 2284580, 92776: 2353687, 92777: 2353686, 92781: 2362736, 92783: 2362920, 92790: 2363166}
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | --------------------------------------------------
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | 
[2025-11-26 23:18:29] 2025-11-27 04:17:28,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | job 6896577838 has completed (purged errors)
[2025-11-26 23:18:29] 2025-11-27 04:17:28,335 | INFO     | overall cleanup function is called
[2025-11-26 23:18:29] 2025-11-27 04:17:29,351 | INFO     | --- collectZombieJob: --- 10, [1003368]
[2025-11-26 23:18:29] 2025-11-27 04:17:29,351 | INFO     | zombie collector waiting for pid 1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:29,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:18:29] 2025-11-27 04:17:29,352 | INFO     | collected zombie processes
[2025-11-26 23:18:29] 2025-11-27 04:17:29,352 | INFO     | will attempt to kill all subprocesses of pid=1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:29,796 | INFO     | process IDs to be killed: [1003368] (in reverse order)
[2025-11-26 23:18:29] 2025-11-27 04:17:29,957 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:18:29] 2025-11-27 04:17:29,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:18:29] 2025-11-27 04:17:29,978 | INFO     | did not find any defunct processes belonging to 1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:29,998 | INFO     | did not find any defunct processes belonging to 1003368
[2025-11-26 23:18:29] 2025-11-27 04:17:29,999 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:18:29] 2025-11-27 04:17:29,999 | INFO     | ready for new job
[2025-11-26 23:18:29] 2025-11-27 04:17:29,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:18:29] 2025-11-27 04:17:30,006 | INFO     | ***************************************
[2025-11-26 23:18:29] 2025-11-27 04:17:30,007 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:18:29] 2025-11-27 04:17:30,007 | INFO     | ***************************************
[2025-11-26 23:18:29] 2025-11-27 04:17:30,007 | INFO     | 
[2025-11-26 23:18:29] 2025-11-27 04:17:30,010 | INFO     | architecture information:
[2025-11-26 23:18:29] 2025-11-27 04:17:30,011 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:18:29] 2025-11-27 04:17:30,031 | INFO     | cat /etc/os-release:
[2025-11-26 23:18:29] NAME="CentOS Linux"
[2025-11-26 23:18:29] VERSION="7 (Core)"
[2025-11-26 23:18:29] ID="centos"
[2025-11-26 23:18:29] ID_LIKE="rhel fedora"
[2025-11-26 23:18:29] VERSION_ID="7"
[2025-11-26 23:18:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:18:29] ANSI_COLOR="0;31"
[2025-11-26 23:18:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:18:29] HOME_URL="https://www.centos.org/"
[2025-11-26 23:18:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:18:29] 
[2025-11-26 23:18:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:18:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:18:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:18:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:18:29] 
[2025-11-26 23:18:29] 2025-11-27 04:17:30,031 | INFO     | ***************************************
[2025-11-26 23:18:29] 2025-11-27 04:17:30,534 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 23:18:29] 2025-11-27 04:17:30,557 | INFO     | sufficient remaining disk space (89084919808 B)
[2025-11-26 23:18:29] 2025-11-27 04:17:30,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:18:29] 2025-11-27 04:17:30,557 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:18:29] 2025-11-27 04:17:30,557 | INFO     | update_server=False
[2025-11-26 23:18:29] 2025-11-27 04:17:30,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:18:29] 2025-11-27 04:17:30,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:18:29] 2025-11-27 04:17:30,560 | INFO     | aborting loop
[2025-11-26 23:18:29] 2025-11-27 04:17:31,028 | INFO     | all payload control threads have been joined
[2025-11-26 23:18:29] 2025-11-27 04:17:31,401 | INFO     | all job control threads have been joined
[2025-11-26 23:18:29] 2025-11-27 04:17:31,566 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:31,567 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:31,586 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:31,606 | INFO     | all data control threads have been joined
[2025-11-26 23:18:29] 2025-11-27 04:17:31,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:18:29] 2025-11-27 04:17:31,656 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:31,840 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:31,969 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:18:29] 2025-11-27 04:17:32,033 | INFO     | [payload] control thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,407 | INFO     | [job] control thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,435 | INFO     | [job] validate thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,612 | INFO     | [data] control thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,739 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:32,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:33,026 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:33,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:18:29] 2025-11-27 04:17:33,641 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:34,337 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:17:36,013 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:18:29] 2025-11-27 04:18:00,341 | INFO     | PID=996486 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 23:18:29] 2025-11-27 04:18:00,341 | INFO     | .. there are 41 such processes running
[2025-11-26 23:18:29] 2025-11-27 04:18:00,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:18:29] 2025-11-27 04:18:00,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:18:29] 2025-11-27 04:18:00,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:18:29] 2025-11-27 04:18:23,266 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:18:29] 2025-11-27 04:18:23,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585421248320)>', '<ExcThread(monitor, started 140584933119744)>']
[2025-11-26 23:18:29] 2025-11-27 04:18:24,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:18:29] 2025-11-27 04:18:24,498 | INFO     | [monitor] control thread has ended
[2025-11-26 23:18:29] 2025-11-27 04:18:28,621 | INFO     | all workflow threads have been joined
[2025-11-26 23:18:29] 2025-11-27 04:18:28,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:18:29] 2025-11-27 04:18:28,621 | INFO     | traces error code: 0
[2025-11-26 23:18:29] 2025-11-27 04:18:28,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:18:29] 2025-11-27 04:18:28,746 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:18:29] 2025-11-27 04:18:28,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:18:29] 2025-11-27 04:18:28,752 [wrapper] pilotpid: 996486
[2025-11-26 23:18:29] 2025-11-27 04:18:28,755 [wrapper] Pilot exit status: 0
[2025-11-26 23:18:29] 2025-11-27 04:18:28,789 [wrapper] pandaids: 6896577838
[2025-11-26 23:18:29] 2025-11-27 04:18:28,902 [wrapper] cleanup supervisor_pilot 3391772 996487
[2025-11-26 23:18:29] 2025-11-27 04:18:28,904 [wrapper] Test setup, not cleaning
[2025-11-26 23:18:29] 2025-11-27 04:18:28,907 [wrapper] apfmon messages muted
[2025-11-26 23:18:29] 2025-11-27 04:18:28,909 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:18:29] 2025-11-27 04:18:28,911 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:18:29]  *** Error codes and diagnostics ***
[2025-11-26 23:18:29]     "exeErrorCode": 0,
[2025-11-26 23:18:29]     "exeErrorDiag": "",
[2025-11-26 23:18:29]     "pilotErrorCode": 0,
[2025-11-26 23:18:29]     "pilotErrorDiag": "",
[2025-11-26 23:18:29]  *** Listing of results directory ***
[2025-11-26 23:18:29] total 1329460
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:25 queuedata.json
[2025-11-26 23:18:29] -rwx------. 1 boincer umatlas     36292 Nov 25 00:27 runpilot2-wrapper.sh
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:18:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:30 run_atlas
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:30 job.xml
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas 410490042 Nov 25 21:30 EVNT.47483658._002103.pool.root.1
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:30 start_atlas.sh
[2025-11-26 23:18:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:30 shared
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 21:30 input.tar.gz
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:30 boinc_lockfile
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 21:30 pandaJob.out
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas        57 Nov 25 21:30 setup.sh.local
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas    991877 Nov 25 21:30 agis_schedconf.cvmfs.json
[2025-11-26 23:18:29] drwx------. 5 boincer umatlas      4096 Nov 25 21:30 pilot3
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:56 boinc_task_state.xml
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 23:12 init_data.xml
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas 917397878 Nov 26 23:16 HITS.47556161._000868.pool.root.1
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas      1058 Nov 26 23:17 memory_monitor_summary.json
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas        95 Nov 26 23:17 pilot_heartbeat.json
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas   2539857 Nov 26 23:17 log.47556161._000868.job.log.tgz.1
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas      8616 Nov 26 23:17 heartbeat.json
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:18 wrapper_checkpoint.txt
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:18 boinc_mmap_file
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas      4823 Nov 26 23:18 pilotlog.txt
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas  12234713 Nov 26 23:18 log.47556161._000868.job.log.1
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas       353 Nov 26 23:18 output.list
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:18 runtime_log
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas  14796800 Nov 26 23:18 result.tar.gz
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 23:18 runtime_log.err
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas       665 Nov 26 23:18 1T9MDmfl0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnAMKDmMSr39n.diag
[2025-11-26 23:18:29] -rw-r--r--. 1 boincer umatlas     21130 Nov 26 23:18 stderr.txt
[2025-11-26 23:18:29] HITS file was successfully produced:
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas 917397878 Nov 26 23:16 shared/HITS.pool.root.1
[2025-11-26 23:18:29]  *** Contents of shared directory: ***
[2025-11-26 23:18:29] total 1311828
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas 410490042 Nov 25 21:30 ATLAS.root_0
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:30 start_atlas.sh
[2025-11-26 23:18:29] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 21:30 input.tar.gz
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas 917397878 Nov 26 23:16 HITS.pool.root.1
[2025-11-26 23:18:29] -rw-------. 1 boincer umatlas  14796800 Nov 26 23:18 result.tar.gz
23:18:30 (992792): run_atlas exited; CPU time 199368.823652
23:18:30 (992792): called boinc_finish(0)

</stderr_txt>
]]>

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