Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:40:17 (3024997): wrapper (7.7.26015): starting
17:40:17 (3024997): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 17:40:17] Arguments: --nthreads 10
[2025-11-26 17:40:17] Threads: 10
[2025-11-26 17:40:17] Checking for CVMFS
[2025-11-26 17:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:40:17] 2.13.3.0 4524 8498 66700 153342 2 90 3649231 4096001 10690 130560 0 1171998679 99.999 1271994 709 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-26 17:40:17] CVMFS is ok
[2025-11-26 17:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:40:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 17:40:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 17:40:17] Further information can be found at the LHC@home message board.
[2025-11-26 17:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:40:17] Checking for apptainer binary...
[2025-11-26 17:40:17] apptainer is not installed, using version from CVMFS
[2025-11-26 17:40:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:40:18] 7950x-linux
[2025-11-26 17:40:18] apptainer works
[2025-11-26 17:40:18] Set ATHENA_PROC_NUMBER=10
[2025-11-26 17:40:18] Set ATHENA_CORE_NUMBER=10
[2025-11-26 17:40:18] Starting ATLAS job with PandaID=6896577816
[2025-11-26 17:40:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc514/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:02:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:02:14] 2025-11-27 18:01:17,512 | INFO     | time since job start (58848s) is within the limit (172800.0s)
[2025-11-27 10:02:14] 2025-11-27 18:01:17,819 | INFO     | monitor loop #4276: job 0:6896577816 is in state 'finished'
[2025-11-27 10:02:14] 2025-11-27 18:01:17,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,803 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 10:02:14] 2025-11-27 18:01:18,806 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8598124999994
[2025-11-27 10:02:14] 2025-11-27 18:01:18,810 | INFO     | using path: /var/lib/multiboinc/boinc514/slots/3/PanDA_Pilot-6896577816/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,810 | INFO     | extracted standard info from prmon json
[2025-11-27 10:02:14] 2025-11-27 18:01:18,810 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:02:14] 2025-11-27 18:01:18,810 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:02:14] 2025-11-27 18:01:18,818 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:02:14] 2025-11-27 18:01:18,819 | INFO     | sum of square deviations: 278650584082.9993
[2025-11-27 10:02:14] 2025-11-27 18:01:18,829 | INFO     | sum of deviations: 1982965699899.0996
[2025-11-27 10:02:14] 2025-11-27 18:01:18,829 | INFO     | mean x: 1764237060.0010362
[2025-11-27 10:02:14] 2025-11-27 18:01:18,829 | INFO     | mean y: 3158818.9025906734
[2025-11-27 10:02:14] 2025-11-27 18:01:18,829 | INFO     | intersect: -12551710168.670889
[2025-11-27 10:02:14] 2025-11-27 18:01:18,830 | INFO     | chi2: 6.1090978122023385
[2025-11-27 10:02:14] 2025-11-27 18:01:18,830 | INFO     | sum of square deviations: 274341629177.99884
[2025-11-27 10:02:14] 2025-11-27 18:01:18,845 | INFO     | sum of deviations: 2328280660731.291
[2025-11-27 10:02:14] 2025-11-27 18:01:18,845 | INFO     | mean x: 1764236907.5010417
[2025-11-27 10:02:14] 2025-11-27 18:01:18,845 | INFO     | mean y: 3171034.207291667
[2025-11-27 10:02:14] 2025-11-27 18:01:18,845 | INFO     | intersect: -14969542676.76192
[2025-11-27 10:02:14] 2025-11-27 18:01:18,845 | INFO     | chi2: 3.066516232961793
[2025-11-27 10:02:14] 2025-11-27 18:01:18,846 | INFO     | current chi2=3.066516232961793 (change=49.80410647810025 %)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,846 | INFO     | sum of square deviations: 270077326272.99966
[2025-11-27 10:02:14] 2025-11-27 18:01:18,856 | INFO     | sum of deviations: 2406063666735.337
[2025-11-27 10:02:14] 2025-11-27 18:01:18,856 | INFO     | mean x: 1764236755.0010471
[2025-11-27 10:02:14] 2025-11-27 18:01:18,856 | INFO     | mean y: 3173811.660732984
[2025-11-27 10:02:14] 2025-11-27 18:01:18,856 | INFO     | intersect: -15714050637.74112
[2025-11-27 10:02:14] 2025-11-27 18:01:18,857 | INFO     | chi2: 2.769544994094688
[2025-11-27 10:02:14] 2025-11-27 18:01:18,857 | INFO     | current chi2=2.769544994094688 (change=9.684319804831928 %)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,857 | INFO     | right removable region: 954
[2025-11-27 10:02:14] 2025-11-27 18:01:18,857 | INFO     | sum of square deviations: 274341628567.99884
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | sum of deviations: 1671559637463.0288
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | mean x: 1764237212.5010417
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | mean y: 3169828.4697916666
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | intersect: -10746302392.42604
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | chi2: 3.6613165861441845
[2025-11-27 10:02:14] 2025-11-27 18:01:18,868 | INFO     | current chi2=3.6613165861441845 (change=40.06780217479813 %)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,869 | INFO     | sum of square deviations: 270077325052.9997
[2025-11-27 10:02:14] 2025-11-27 18:01:18,883 | INFO     | sum of deviations: 1582395441242.6604
[2025-11-27 10:02:14] 2025-11-27 18:01:18,883 | INFO     | mean x: 1764237365.0010471
[2025-11-27 10:02:14] 2025-11-27 18:01:18,883 | INFO     | mean y: 3173016.3403141364
[2025-11-27 10:02:14] 2025-11-27 18:01:18,883 | INFO     | intersect: -10333574665.457022
[2025-11-27 10:02:14] 2025-11-27 18:01:18,884 | INFO     | chi2: 3.5646119191812597
[2025-11-27 10:02:14] 2025-11-27 18:01:18,884 | INFO     | current chi2=3.5646119191812597 (change=2.6412538956312073 %)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,884 | INFO     | left removable region: 20
[2025-11-27 10:02:14] 2025-11-27 18:01:18,884 | INFO     | sum of square deviations: 252649603001.49884
[2025-11-27 10:02:14] 2025-11-27 18:01:18,894 | INFO     | sum of deviations: 1879371246909.9282
[2025-11-27 10:02:14] 2025-11-27 18:01:18,894 | INFO     | mean x: 1764237334.5010707
[2025-11-27 10:02:14] 2025-11-27 18:01:18,894 | INFO     | mean y: 3192651.5728051392
[2025-11-27 10:02:14] 2025-11-27 18:01:18,894 | INFO     | intersect: -13120346351.837603
[2025-11-27 10:02:14] 2025-11-27 18:01:18,894 | INFO     | chi2: 0.15667400887773247
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | current memory leak: 7.44 B/s (using 934 data points, chi2=0.16)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | could have reported an average CPU frequency of 3999 MHz (36 samples)
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | ..............................
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . Timing measurements:
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . get job = 0 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . initial setup = 3 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . payload setup = 6 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . stage-in = 0 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,895 | INFO     | . payload execution = 58809 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,896 | INFO     | . stage-out = 3 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,896 | INFO     | . log creation = 0 s
[2025-11-27 10:02:14] 2025-11-27 18:01:18,896 | INFO     | ..............................
[2025-11-27 10:02:14] 2025-11-27 18:01:19,275 | INFO     | 
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | job summary report
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | --------------------------------------------------
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | PanDA job id: 6896577816
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | task id: 47556161
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | errors: (none)
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | pilot state: finished 
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | transexitcode: 0
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | exeerrorcode: 0
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | exeerrordiag: 
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | exitcode: 0
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | exitmsg: OK
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | cpuconsumptiontime: 134583 s
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | nevents: 1000
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | neventsw: 0
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | pid: 3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | pgrp: 3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | corecount: 10
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | event service: False
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | sizes: {0: 2284276, 5: 2284538, 11: 2284594, 58820: 2336661, 58825: 2345683, 58827: 2345739, 58833: 2346113}
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | --------------------------------------------------
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | 
[2025-11-27 10:02:14] 2025-11-27 18:01:19,276 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc514/slots/3
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:02:14] 2025-11-27 18:01:19,295 | INFO     | job 6896577816 has completed (purged errors)
[2025-11-27 10:02:14] 2025-11-27 18:01:19,295 | INFO     | overall cleanup function is called
[2025-11-27 10:02:14] 2025-11-27 18:01:20,314 | INFO     | --- collectZombieJob: --- 10, [3035595]
[2025-11-27 10:02:14] 2025-11-27 18:01:20,315 | INFO     | zombie collector waiting for pid 3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:20,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:02:14] 2025-11-27 18:01:20,315 | INFO     | collected zombie processes
[2025-11-27 10:02:14] 2025-11-27 18:01:20,315 | INFO     | will attempt to kill all subprocesses of pid=3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:20,594 | INFO     | process IDs to be killed: [3035595] (in reverse order)
[2025-11-27 10:02:14] 2025-11-27 18:01:20,752 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:02:14] 2025-11-27 18:01:20,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:02:14] 2025-11-27 18:01:20,758 | INFO     | did not find any defunct processes belonging to 3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:20,763 | INFO     | did not find any defunct processes belonging to 3035595
[2025-11-27 10:02:14] 2025-11-27 18:01:20,764 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:02:14] 2025-11-27 18:01:20,764 | INFO     | ready for new job
[2025-11-27 10:02:14] 2025-11-27 18:01:20,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:02:14] 2025-11-27 18:01:20,768 | INFO     | ***************************************
[2025-11-27 10:02:14] 2025-11-27 18:01:20,768 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:02:14] 2025-11-27 18:01:20,768 | INFO     | ***************************************
[2025-11-27 10:02:14] 2025-11-27 18:01:20,768 | INFO     | 
[2025-11-27 10:02:14] 2025-11-27 18:01:20,769 | INFO     | architecture information:
[2025-11-27 10:02:14] 2025-11-27 18:01:20,770 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:02:14] 2025-11-27 18:01:20,789 | INFO     | cat /etc/os-release:
[2025-11-27 10:02:14] NAME="CentOS Linux"
[2025-11-27 10:02:14] VERSION="7 (Core)"
[2025-11-27 10:02:14] ID="centos"
[2025-11-27 10:02:14] ID_LIKE="rhel fedora"
[2025-11-27 10:02:14] VERSION_ID="7"
[2025-11-27 10:02:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:02:14] ANSI_COLOR="0;31"
[2025-11-27 10:02:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:02:14] HOME_URL="https://www.centos.org/"
[2025-11-27 10:02:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:02:14] 
[2025-11-27 10:02:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:02:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:02:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:02:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:02:14] 
[2025-11-27 10:02:14] 2025-11-27 18:01:20,790 | INFO     | ***************************************
[2025-11-27 10:02:14] 2025-11-27 18:01:21,292 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc514/slots/3
[2025-11-27 10:02:14] 2025-11-27 18:01:21,319 | INFO     | sufficient remaining disk space (189120118784 B)
[2025-11-27 10:02:14] 2025-11-27 18:01:21,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:02:14] 2025-11-27 18:01:21,320 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:02:14] 2025-11-27 18:01:21,320 | INFO     | update_server=False
[2025-11-27 10:02:14] 2025-11-27 18:01:21,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:02:14] 2025-11-27 18:01:21,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:02:14] 2025-11-27 18:01:21,334 | INFO     | aborting loop
[2025-11-27 10:02:14] 2025-11-27 18:01:21,376 | INFO     | all data control threads have been joined
[2025-11-27 10:02:14] 2025-11-27 18:01:21,400 | INFO     | all job control threads have been joined
[2025-11-27 10:02:14] 2025-11-27 18:01:21,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:02:14] 2025-11-27 18:01:22,324 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,341 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,382 | INFO     | [data] control thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,383 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,405 | INFO     | [job] control thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,533 | INFO     | all payload control threads have been joined
[2025-11-27 10:02:14] 2025-11-27 18:01:22,682 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:22,787 | INFO     | [job] validate thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,079 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,087 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,436 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,519 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,538 | INFO     | [payload] control thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,575 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:23,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:02:14] 2025-11-27 18:01:23,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:02:14] 2025-11-27 18:01:24,967 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:27,767 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:02:14] 2025-11-27 18:01:50,877 | INFO     | PID=3028840 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:02:14] 2025-11-27 18:01:50,877 | INFO     | .. there are 14 such processes running
[2025-11-27 10:02:14] 2025-11-27 18:01:50,877 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:02:14] 2025-11-27 18:01:50,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:02:14] 2025-11-27 18:01:50,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:02:14] 2025-11-27 18:02:07,517 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:02:14] 2025-11-27 18:02:09,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129835554228032)>', '<ExcThread(monitor, started 129834688694016)>']
[2025-11-27 10:02:14] 2025-11-27 18:02:09,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:02:14] 2025-11-27 18:02:09,972 | INFO     | [monitor] control thread has ended
[2025-11-27 10:02:14] 2025-11-27 18:02:14,294 | INFO     | all workflow threads have been joined
[2025-11-27 10:02:14] 2025-11-27 18:02:14,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:02:14] 2025-11-27 18:02:14,295 | INFO     | traces error code: 0
[2025-11-27 10:02:14] 2025-11-27 18:02:14,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:02:14] 2025-11-27 18:02:14,379 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:02:14] 2025-11-27 18:02:14,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:02:14] 2025-11-27 18:02:14,382 [wrapper] pilotpid: 3028840
[2025-11-27 10:02:14] 2025-11-27 18:02:14,391 [wrapper] Pilot exit status: 0
[2025-11-27 10:02:14] 2025-11-27 18:02:14,416 [wrapper] pandaids: 6896577816
[2025-11-27 10:02:14] 2025-11-27 18:02:14,466 [wrapper] cleanup supervisor_pilot  136462 3028841
[2025-11-27 10:02:14] 2025-11-27 18:02:14,468 [wrapper] Test setup, not cleaning
[2025-11-27 10:02:14] 2025-11-27 18:02:14,471 [wrapper] apfmon messages muted
[2025-11-27 10:02:14] 2025-11-27 18:02:14,479 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:02:14] 2025-11-27 18:02:14,494 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:02:14]  *** Error codes and diagnostics ***
[2025-11-27 10:02:14]     "exeErrorCode": 0,
[2025-11-27 10:02:14]     "exeErrorDiag": "",
[2025-11-27 10:02:14]     "pilotErrorCode": 0,
[2025-11-27 10:02:14]     "pilotErrorDiag": "",
[2025-11-27 10:02:14]  *** Listing of results directory ***
[2025-11-27 10:02:14] total 1325212
[2025-11-27 10:02:14] -rw-r--r-- 1 root root    576529 Nov 24 21:12 pilot3.tar.gz
[2025-11-27 10:02:14] -rwx------ 1 4871 1028     36292 Nov 24 21:25 runpilot2-wrapper.sh
[2025-11-27 10:02:14] -rw-r--r-- 1 root root      5112 Nov 24 21:25 queuedata.json
[2025-11-27 10:02:14] -rw-r--r-- 1 root root       100 Nov 26 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:02:14] -rwxr-xr-x 1 root root      7986 Nov 26 17:40 run_atlas
[2025-11-27 10:02:14] -rw-r--r-- 1 root root       105 Nov 26 17:40 job.xml
[2025-11-27 10:02:14] -rw-r--r-- 1 root root      7071 Nov 26 17:40 init_data.xml
[2025-11-27 10:02:14] -rw-r--r-- 2 root root 411600650 Nov 26 17:40 EVNT.47483658._002101.pool.root.1
[2025-11-27 10:02:14] -rw-r--r-- 2 root root     15847 Nov 26 17:40 start_atlas.sh
[2025-11-27 10:02:14] drwxrwx--x 2 root root      4096 Nov 26 17:40 shared
[2025-11-27 10:02:14] -rw-r--r-- 2 root root    590101 Nov 26 17:40 input.tar.gz
[2025-11-27 10:02:14] -rw-r--r-- 1 root root         0 Nov 26 17:40 boinc_lockfile
[2025-11-27 10:02:14] -rw-r--r-- 1 root root      2784 Nov 26 17:40 pandaJob.out
[2025-11-27 10:02:14] -rw------- 1 root root    991530 Nov 26 17:40 agis_schedconf.cvmfs.json
[2025-11-27 10:02:14] drwxr-xr-x 5  320  320      4096 Nov 26 17:40 pilot3
[2025-11-27 10:02:14] -rw-r--r-- 1 root root       533 Nov 27 09:51 boinc_task_state.xml
[2025-11-27 10:02:14] -rw------- 1 root root 920078316 Nov 27 10:00 HITS.47556161._000846.pool.root.1
[2025-11-27 10:02:14] -rw------- 1 root root      1052 Nov 27 10:01 memory_monitor_summary.json
[2025-11-27 10:02:14] -rw------- 1 root root   1516240 Nov 27 10:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:02:14] -rw------- 1 root root   2331929 Nov 27 10:01 log.47556161._000846.job.log.tgz.1
[2025-11-27 10:02:14] -rw------- 1 root root      8599 Nov 27 10:01 heartbeat.json
[2025-11-27 10:02:14] -rw------- 1 root root        95 Nov 27 10:01 pilot_heartbeat.json
[2025-11-27 10:02:14] -rw-r--r-- 1 root root      8192 Nov 27 10:02 boinc_mmap_file
[2025-11-27 10:02:14] -rw-r--r-- 1 root root        29 Nov 27 10:02 wrapper_checkpoint.txt
[2025-11-27 10:02:14] -rw------- 1 root root      4839 Nov 27 10:02 pilotlog.txt
[2025-11-27 10:02:14] -rw------- 1 root root   8376234 Nov 27 10:02 log.47556161._000846.job.log.1
[2025-11-27 10:02:14] -rw------- 1 root root       353 Nov 27 10:02 output.list
[2025-11-27 10:02:14] -rw-r--r-- 1 root root       620 Nov 27 10:02 runtime_log
[2025-11-27 10:02:14] -rw------- 1 root root  10731520 Nov 27 10:02 result.tar.gz
[2025-11-27 10:02:14] -rw-r--r-- 1 root root      9021 Nov 27 10:02 runtime_log.err
[2025-11-27 10:02:14] -rw------- 1 root root       662 Nov 27 10:02 EvdMDmoj0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcAMKDm77SgAn.diag
[2025-11-27 10:02:14] -rw-r--r-- 1 root root     21474 Nov 27 10:02 stderr.txt
[2025-11-27 10:02:14] HITS file was successfully produced:
[2025-11-27 10:02:14] -rw------- 1 root root 920078316 Nov 27 10:00 shared/HITS.pool.root.1
[2025-11-27 10:02:14]  *** Contents of shared directory: ***
[2025-11-27 10:02:14] total 1311556
[2025-11-27 10:02:14] -rw-r--r-- 2 root root 411600650 Nov 26 17:40 ATLAS.root_0
[2025-11-27 10:02:14] -rw-r--r-- 2 root root     15847 Nov 26 17:40 start_atlas.sh
[2025-11-27 10:02:14] -rw-r--r-- 2 root root    590101 Nov 26 17:40 input.tar.gz
[2025-11-27 10:02:14] -rw------- 1 root root 920078316 Nov 27 10:00 HITS.pool.root.1
[2025-11-27 10:02:14] -rw------- 1 root root  10731520 Nov 27 10:02 result.tar.gz
10:02:15 (3024997): run_atlas exited; CPU time 134802.719748
10:02:15 (3024997): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN