Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:22:22 (19148): wrapper (7.7.26015): starting
01:22:22 (19148): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 01:22:22] Arguments: --nthreads 8
[2025-11-28 01:22:22] Threads: 8
[2025-11-28 01:22:22] Checking for CVMFS
[2025-11-28 01:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 01:22:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 01:22:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 01:22:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 01:22:25] 2.11.2.0 31287 192310 140700 153391 3 75 24033978 25165825 1394 130560 11 66345343 99.884 34304258 2175 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 01:22:25] CVMFS is ok
[2025-11-28 01:22:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 01:22:25] Checking for apptainer binary...
[2025-11-28 01:22:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 01:22:25] Running /usr/bin/apptainer --version
[2025-11-28 01:22:25] apptainer version 1.3.2-1.el7
[2025-11-28 01:22:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 01:22:34] cg-vwn426.simple-grid.lan
[2025-11-28 01:22:34] apptainer works
[2025-11-28 01:22:34] Set ATHENA_PROC_NUMBER=8
[2025-11-28 01:22:34] Set ATHENA_CORE_NUMBER=8
[2025-11-28 01:22:34] Starting ATLAS job with PandaID=6896577832
[2025-11-28 01:22:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 00:50:08]  *** The last 200 lines of the pilot log: ***
[2025-11-29 00:50:08] 2025-11-28 23:49:00,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:50:08] 2025-11-28 23:49:01,600 | INFO     | time since job start (84148s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:03,248 | INFO     | monitor loop #5685: job 0:6896577832 is in state 'finished'
[2025-11-29 00:50:08] 2025-11-28 23:49:03,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:50:08] 2025-11-28 23:49:03,612 | INFO     | time since job start (84150s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:05,622 | INFO     | time since job start (84152s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:05,757 | INFO     | monitor loop #5686: job 0:6896577832 is in state 'finished'
[2025-11-29 00:50:08] 2025-11-28 23:49:05,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:50:08] 2025-11-28 23:49:07,628 | INFO     | time since job start (84154s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:07,628 | INFO     | 84161s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-29 00:50:08] 2025-11-28 23:49:08,272 | INFO     | monitor loop #5687: job 0:6896577832 is in state 'finished'
[2025-11-29 00:50:08] 2025-11-28 23:49:08,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:50:08] 2025-11-28 23:49:09,642 | INFO     | time since job start (84156s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:10,777 | INFO     | monitor loop #5688: job 0:6896577832 is in state 'finished'
[2025-11-29 00:50:08] 2025-11-28 23:49:10,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,011 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 00:50:08] 2025-11-28 23:49:11,012 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 00:50:08] 2025-11-28 23:49:11,014 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6896577832/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,015 | INFO     | extracted standard info from prmon json
[2025-11-29 00:50:08] 2025-11-28 23:49:11,015 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:50:08] 2025-11-28 23:49:11,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:50:08] 2025-11-28 23:49:11,053 | INFO     | fitting pss+swap vs Time
[2025-11-29 00:50:08] 2025-11-28 23:49:11,055 | INFO     | sum of square deviations: 795589305826.8444
[2025-11-29 00:50:08] 2025-11-28 23:49:11,141 | INFO     | sum of deviations: 3185862427846.4688
[2025-11-29 00:50:08] 2025-11-28 23:49:11,142 | INFO     | mean x: 1764331832.0942295
[2025-11-29 00:50:08] 2025-11-28 23:49:11,142 | INFO     | mean y: 2835664.7173119066
[2025-11-29 00:50:08] 2025-11-28 23:49:11,142 | INFO     | intersect: -7062264950.581673
[2025-11-29 00:50:08] 2025-11-28 23:49:11,144 | INFO     | chi2: 22.941847665422422
[2025-11-29 00:50:08] 2025-11-28 23:49:11,146 | INFO     | sum of square deviations: 786904371955.8351
[2025-11-29 00:50:08] 2025-11-28 23:49:11,232 | INFO     | sum of deviations: 3635355217972.677
[2025-11-29 00:50:08] 2025-11-28 23:49:11,233 | INFO     | mean x: 1764331679.5982404
[2025-11-29 00:50:08] 2025-11-28 23:49:11,233 | INFO     | mean y: 2843556.2822580645
[2025-11-29 00:50:08] 2025-11-28 23:49:11,233 | INFO     | intersect: -8148048224.532431
[2025-11-29 00:50:08] 2025-11-28 23:49:11,235 | INFO     | chi2: 19.770539008021018
[2025-11-29 00:50:08] 2025-11-28 23:49:11,235 | INFO     | current chi2=19.770539008021018 (change=13.823248692306281 %)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,235 | INFO     | right removable region: 1363
[2025-11-29 00:50:08] 2025-11-28 23:49:11,241 | INFO     | sum of square deviations: 786903458175.8357
[2025-11-29 00:50:08] 2025-11-28 23:49:11,331 | INFO     | sum of deviations: 2604644353149.394
[2025-11-29 00:50:08] 2025-11-28 23:49:11,335 | INFO     | mean x: 1764331984.5982404
[2025-11-29 00:50:08] 2025-11-28 23:49:11,335 | INFO     | mean y: 2845869.164956012
[2025-11-29 00:50:08] 2025-11-28 23:49:11,335 | INFO     | intersect: -5837079337.692889
[2025-11-29 00:50:08] 2025-11-28 23:49:11,337 | INFO     | chi2: 18.078358015688007
[2025-11-29 00:50:08] 2025-11-28 23:49:11,337 | INFO     | current chi2=18.078358015688007 (change=21.199206448679313 %)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,337 | INFO     | left removable region: 10
[2025-11-29 00:50:08] 2025-11-28 23:49:11,339 | INFO     | sum of square deviations: 768018681967.4597
[2025-11-29 00:50:08] 2025-11-28 23:49:11,412 | INFO     | sum of deviations: 2653037353642.663
[2025-11-29 00:50:08] 2025-11-28 23:49:11,412 | INFO     | mean x: 1764331954.1071692
[2025-11-29 00:50:08] 2025-11-28 23:49:11,412 | INFO     | mean y: 2864507.416112343
[2025-11-29 00:50:08] 2025-11-28 23:49:11,412 | INFO     | intersect: -6091829135.296599
[2025-11-29 00:50:08] 2025-11-28 23:49:11,414 | INFO     | chi2: 10.61621360276068
[2025-11-29 00:50:08] 2025-11-28 23:49:11,414 | INFO     | current memory leak: 3.45 B/s (using 1353 data points, chi2=10.62)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,416 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,416 | INFO     | ..............................
[2025-11-29 00:50:08] 2025-11-28 23:49:11,416 | INFO     | . Timing measurements:
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . get job = 0 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . initial setup = 7 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . payload setup = 157 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . stage-in = 0 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . payload execution = 83604 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . stage-out = 3 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | . log creation = 1 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,417 | INFO     | ..............................
[2025-11-29 00:50:08] 2025-11-28 23:49:11,654 | INFO     | time since job start (84158s) is within the limit (172800.0s)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,986 | INFO     | 
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | job summary report
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | --------------------------------------------------
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | PanDA job id: 6896577832
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | task id: 47556161
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | errors: (none)
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | pilot state: finished 
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | transexitcode: 0
[2025-11-29 00:50:08] 2025-11-28 23:49:11,987 | INFO     | exeerrorcode: 0
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | exeerrordiag: 
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | exitcode: 0
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | exitmsg: OK
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | cpuconsumptiontime: 313939 s
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | nevents: 1000
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | neventsw: 0
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | pid: 29469
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | pgrp: 29469
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | corecount: 8
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | event service: False
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | sizes: {0: 2284035, 1: 2284290, 2: 2284290, 12: 2284318, 23: 2284346, 34: 2284374, 45: 2284530, 55: 2284558, 66: 2284586, 77: 2284614, 87: 2284670, 96: 2285240, 98
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | --------------------------------------------------
[2025-11-29 00:50:08] 2025-11-28 23:49:11,988 | INFO     | 
[2025-11-29 00:50:08] 2025-11-28 23:49:11,989 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 00:50:08] 2025-11-28 23:49:12,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 00:50:08] 2025-11-28 23:49:12,552 | INFO     | job 6896577832 has completed (purged errors)
[2025-11-29 00:50:08] 2025-11-28 23:49:12,552 | INFO     | overall cleanup function is called
[2025-11-29 00:50:08] 2025-11-28 23:49:13,566 | INFO     | --- collectZombieJob: --- 10, [29469]
[2025-11-29 00:50:08] 2025-11-28 23:49:13,567 | INFO     | zombie collector waiting for pid 29469
[2025-11-29 00:50:08] 2025-11-28 23:49:13,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 00:50:08] 2025-11-28 23:49:13,567 | INFO     | collected zombie processes
[2025-11-29 00:50:08] 2025-11-28 23:49:13,567 | INFO     | will attempt to kill all subprocesses of pid=29469
[2025-11-29 00:50:08] 2025-11-28 23:49:13,701 | INFO     | process IDs to be killed: [29469] (in reverse order)
[2025-11-29 00:50:08] 2025-11-28 23:49:14,222 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 00:50:08] 2025-11-28 23:49:14,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 00:50:08] 2025-11-28 23:49:14,225 | INFO     | did not find any defunct processes belonging to 29469
[2025-11-29 00:50:08] 2025-11-28 23:49:14,228 | INFO     | did not find any defunct processes belonging to 29469
[2025-11-29 00:50:08] 2025-11-28 23:49:14,234 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 00:50:08] 2025-11-28 23:49:14,234 | INFO     | ready for new job
[2025-11-29 00:50:08] 2025-11-28 23:49:14,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 00:50:08] 2025-11-28 23:49:14,239 | INFO     | ***************************************
[2025-11-29 00:50:08] 2025-11-28 23:49:14,239 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 00:50:08] 2025-11-28 23:49:14,240 | INFO     | ***************************************
[2025-11-29 00:50:08] 2025-11-28 23:49:14,240 | INFO     | 
[2025-11-29 00:50:08] 2025-11-28 23:49:14,240 | INFO     | pilot is running in a VM
[2025-11-29 00:50:08] 2025-11-28 23:49:14,240 | INFO     | architecture information:
[2025-11-29 00:50:08] 2025-11-28 23:49:14,245 | INFO     | executing command: cat /etc/os-release
[2025-11-29 00:50:08] 2025-11-28 23:49:14,370 | INFO     | cat /etc/os-release:
[2025-11-29 00:50:08] NAME="CentOS Linux"
[2025-11-29 00:50:08] VERSION="7 (Core)"
[2025-11-29 00:50:08] ID="centos"
[2025-11-29 00:50:08] ID_LIKE="rhel fedora"
[2025-11-29 00:50:08] VERSION_ID="7"
[2025-11-29 00:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 00:50:08] ANSI_COLOR="0;31"
[2025-11-29 00:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 00:50:08] HOME_URL="https://www.centos.org/"
[2025-11-29 00:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 00:50:08] 
[2025-11-29 00:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 00:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 00:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 00:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 00:50:08] 
[2025-11-29 00:50:08] 2025-11-28 23:49:14,371 | INFO     | ***************************************
[2025-11-29 00:50:08] 2025-11-28 23:49:14,874 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-29 00:50:08] 2025-11-28 23:49:14,994 | INFO     | sufficient remaining disk space (491801018368 B)
[2025-11-29 00:50:08] 2025-11-28 23:49:14,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 00:50:08] 2025-11-28 23:49:14,995 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 00:50:08] 2025-11-28 23:49:14,995 | INFO     | update_server=False
[2025-11-29 00:50:08] 2025-11-28 23:49:14,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 00:50:08] 2025-11-28 23:49:14,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:50:08] 2025-11-28 23:49:14,996 | INFO     | aborting loop
[2025-11-29 00:50:08] 2025-11-28 23:49:15,114 | INFO     | all payload control threads have been joined
[2025-11-29 00:50:08] 2025-11-28 23:49:15,302 | INFO     | all data control threads have been joined
[2025-11-29 00:50:08] 2025-11-28 23:49:15,693 | INFO     | all job control threads have been joined
[2025-11-29 00:50:08] 2025-11-28 23:49:16,001 | INFO     | [job] retrieve thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,002 | INFO     | [job] job monitor thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,086 | INFO     | [data] copytool_in thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,121 | INFO     | [payload] control thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 00:50:08] 2025-11-28 23:49:16,308 | INFO     | [data] control thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 00:50:08] 2025-11-28 23:49:16,392 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,408 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:50:08] 2025-11-28 23:49:16,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,699 | INFO     | [job] control thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:16,890 | INFO     | [payload] validate_post thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:17,135 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:17,232 | INFO     | [payload] failed_post thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:17,254 | INFO     | [job] validate thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:17,556 | INFO     | [job] queue monitor thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:18,336 | INFO     | [data] copytool_out thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:20,310 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 00:50:08] 2025-11-28 23:49:44,851 | INFO     | PID=22910 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 00:50:08] 2025-11-28 23:49:44,852 | INFO     | .. there are 9 such processes running
[2025-11-29 00:50:08] 2025-11-28 23:49:44,852 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 00:50:08] 2025-11-28 23:49:44,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 00:50:08] 2025-11-28 23:49:44,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 00:50:08] 2025-11-28 23:49:59,898 | INFO     | [monitor] cgroup control has ended
[2025-11-29 00:50:08] 2025-11-28 23:50:01,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012653557568)>', '<ExcThread(monitor, started 140012209288960)>']
[2025-11-29 00:50:08] 2025-11-28 23:50:01,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 00:50:08] 2025-11-28 23:50:01,955 | INFO     | [monitor] control thread has ended
[2025-11-29 00:50:08] 2025-11-28 23:50:06,787 | INFO     | all workflow threads have been joined
[2025-11-29 00:50:08] 2025-11-28 23:50:06,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 00:50:08] 2025-11-28 23:50:06,788 | INFO     | traces error code: 0
[2025-11-29 00:50:08] 2025-11-28 23:50:06,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 00:50:08] 2025-11-28 23:50:07,043 [wrapper] ==== pilot stdout END ====
[2025-11-29 00:50:08] 2025-11-28 23:50:07,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 00:50:08] 2025-11-28 23:50:07,120 [wrapper] pilotpid: 22910
[2025-11-29 00:50:08] 2025-11-28 23:50:07,142 [wrapper] Pilot exit status: 0
[2025-11-29 00:50:08] 2025-11-28 23:50:07,200 [wrapper] pandaids: 6896577832
[2025-11-29 00:50:08] 2025-11-28 23:50:07,270 [wrapper] cleanup supervisor_pilot 23322 22911
[2025-11-29 00:50:08] 2025-11-28 23:50:07,319 [wrapper] Test setup, not cleaning
[2025-11-29 00:50:08] 2025-11-28 23:50:07,434 [wrapper] apfmon messages muted
[2025-11-29 00:50:08] 2025-11-28 23:50:07,541 [wrapper] ==== wrapper stdout END ====
[2025-11-29 00:50:08] 2025-11-28 23:50:07,659 [wrapper] ==== wrapper stderr END ====
[2025-11-29 00:50:08]  *** Error codes and diagnostics ***
[2025-11-29 00:50:08]     "exeErrorCode": 0,
[2025-11-29 00:50:08]     "exeErrorDiag": "",
[2025-11-29 00:50:08]     "pilotErrorCode": 0,
[2025-11-29 00:50:08]     "pilotErrorDiag": "",
[2025-11-29 00:50:08]  *** Listing of results directory ***
[2025-11-29 00:50:08] total 1330940
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc    576529 Nov 25 06:12 pilot3.tar.gz
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc      5112 Nov 25 06:25 queuedata.json
[2025-11-29 00:50:08] -rwx------. 1 boinc boinc     36292 Nov 25 06:27 runpilot2-wrapper.sh
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc       100 Nov 28 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 00:50:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 01:22 run_atlas
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc       105 Nov 28 01:22 job.xml
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc      6391 Nov 28 01:22 init_data.xml
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc 410490042 Nov 28 01:22 EVNT.47483658._002103.pool.root.1
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc     15847 Nov 28 01:22 start_atlas.sh
[2025-11-29 00:50:08] drwxrwx--x. 2 boinc boinc        68 Nov 28 01:22 shared
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc    590105 Nov 28 01:22 input.tar.gz
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc         0 Nov 28 01:22 boinc_lockfile
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc      2784 Nov 28 01:22 pandaJob.out
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc    991826 Nov 28 01:26 agis_schedconf.cvmfs.json
[2025-11-29 00:50:08] drwx------. 5 boinc boinc      4096 Nov 28 01:26 pilot3
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc       533 Nov 29 00:24 boinc_task_state.xml
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc 921143471 Nov 29 00:44 HITS.47556161._000862.pool.root.1
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc      1033 Nov 29 00:45 memory_monitor_summary.json
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc   1516240 Nov 29 00:46 agis_ddmendpoints.agis.ALL.json
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc   2448790 Nov 29 00:46 log.47556161._000862.job.log.tgz.1
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc      7942 Nov 29 00:49 heartbeat.json
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc        95 Nov 29 00:49 pilot_heartbeat.json
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc      8192 Nov 29 00:49 boinc_mmap_file
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc        29 Nov 29 00:49 wrapper_checkpoint.txt
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc      4884 Nov 29 00:50 pilotlog.txt
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc  11226302 Nov 29 00:50 log.47556161._000862.job.log.1
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc       353 Nov 29 00:50 output.list
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc       620 Nov 29 00:50 runtime_log
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc  13690880 Nov 29 00:50 result.tar.gz
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc       662 Nov 29 00:50 ZV1MDmfl0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhAMKDmVg6hSn.diag
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc      8817 Nov 29 00:50 runtime_log.err
[2025-11-29 00:50:08] -rw-r--r--. 1 boinc boinc     21462 Nov 29 00:50 stderr.txt
[2025-11-29 00:50:08] HITS file was successfully produced:
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc 921143471 Nov 29 00:44 shared/HITS.pool.root.1
[2025-11-29 00:50:08]  *** Contents of shared directory: ***
[2025-11-29 00:50:08] total 1314396
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc 410490042 Nov 28 01:22 ATLAS.root_0
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc     15847 Nov 28 01:22 start_atlas.sh
[2025-11-29 00:50:08] -rw-r--r--. 2 boinc boinc    590105 Nov 28 01:22 input.tar.gz
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc 921143471 Nov 29 00:44 HITS.pool.root.1
[2025-11-29 00:50:08] -rw-------. 1 boinc boinc  13690880 Nov 29 00:50 result.tar.gz
00:50:09 (19148): run_atlas exited; CPU time 314501.821584
00:50:09 (19148): called boinc_finish(0)

</stderr_txt>
]]>

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