Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:09 (2039135): wrapper (7.7.26015): starting
21:46:09 (2039135): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 21:46:09] Arguments: --nthreads 9
[2025-11-25 21:46:09] Threads: 9
[2025-11-25 21:46:09] Checking for CVMFS
[2025-11-25 21:46:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:46:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:46:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:46:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:46:11] 2.13.3.0 9393 29421 341820 153305 1 374 31285314 32935936 23023 16776704 0 109021348 99.528 130681375 39205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:46:11] CVMFS is ok
[2025-11-25 21:46:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:46:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:46:11] Further information can be found at the LHC@home message board.
[2025-11-25 21:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:46:11] Checking for apptainer binary...
[2025-11-25 21:46:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:46:11] Running /usr/bin/apptainer --version
[2025-11-25 21:46:11] apptainer version 1.4.4-1.el9
[2025-11-25 21:46:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:46:12] c6-6-39-1.aglt2.org
[2025-11-25 21:46:12] apptainer works
[2025-11-25 21:46:12] Set ATHENA_PROC_NUMBER=9
[2025-11-25 21:46:12] Set ATHENA_CORE_NUMBER=9
[2025-11-25 21:46:12] Starting ATLAS job with PandaID=6894239146
[2025-11-25 21:46:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:20:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:20:49] 2025-11-26 10:20:02,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,132 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 05:20:49] 2025-11-26 10:20:03,140 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3106.668482142857
[2025-11-26 05:20:49] 2025-11-26 10:20:03,150 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894239146/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,150 | INFO     | extracted standard info from prmon json
[2025-11-26 05:20:49] 2025-11-26 10:20:03,150 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:20:49] 2025-11-26 10:20:03,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:20:49] 2025-11-26 10:20:03,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 05:20:49] 2025-11-26 10:20:03,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 05:20:49] 2025-11-26 10:20:03,158 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:20:49] 2025-11-26 10:20:03,159 | INFO     | sum of square deviations: 27324842684.44945
[2025-11-26 05:20:49] 2025-11-26 10:20:03,163 | INFO     | sum of deviations: 99322591390.34833
[2025-11-26 05:20:49] 2025-11-26 10:20:03,163 | INFO     | mean x: 1764138842.1011236
[2025-11-26 05:20:49] 2025-11-26 10:20:03,163 | INFO     | mean y: 2594886.3033707864
[2025-11-26 05:20:49] 2025-11-26 10:20:03,163 | INFO     | intersect: -6409842447.492115
[2025-11-26 05:20:49] 2025-11-26 10:20:03,164 | INFO     | chi2: 3.5476782373367115
[2025-11-26 05:20:49] 2025-11-26 10:20:03,164 | INFO     | sum of square deviations: 26414104449.397804
[2025-11-26 05:20:49] 2025-11-26 10:20:03,168 | INFO     | sum of deviations: 159069226268.7499
[2025-11-26 05:20:49] 2025-11-26 10:20:03,168 | INFO     | mean x: 1764138689.6022727
[2025-11-26 05:20:49] 2025-11-26 10:20:03,169 | INFO     | mean y: 2604821.45
[2025-11-26 05:20:49] 2025-11-26 10:20:03,169 | INFO     | intersect: -10621271408.137543
[2025-11-26 05:20:49] 2025-11-26 10:20:03,169 | INFO     | chi2: 2.0248295944933226
[2025-11-26 05:20:49] 2025-11-26 10:20:03,169 | INFO     | current chi2=2.0248295944933226 (change=42.92521871957056 %)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,170 | INFO     | sum of square deviations: 25523831714.34484
[2025-11-26 05:20:49] 2025-11-26 10:20:03,174 | INFO     | sum of deviations: 156357940213.89655
[2025-11-26 05:20:49] 2025-11-26 10:20:03,174 | INFO     | mean x: 1764138537.1034484
[2025-11-26 05:20:49] 2025-11-26 10:20:03,174 | INFO     | mean y: 2604357.0022988506
[2025-11-26 05:20:49] 2025-11-26 10:20:03,174 | INFO     | intersect: -10804435549.879183
[2025-11-26 05:20:49] 2025-11-26 10:20:03,178 | INFO     | chi2: 2.024942935994022
[2025-11-26 05:20:49] 2025-11-26 10:20:03,178 | INFO     | current chi2=2.024942935994022 (change=-0.005597582187052541 %)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,178 | INFO     | right removable region: 434
[2025-11-26 05:20:49] 2025-11-26 10:20:03,178 | INFO     | sum of square deviations: 26414076999.3978
[2025-11-26 05:20:49] 2025-11-26 10:20:03,182 | INFO     | sum of deviations: 3675629682.806839
[2025-11-26 05:20:49] 2025-11-26 10:20:03,183 | INFO     | mean x: 1764138994.6022727
[2025-11-26 05:20:49] 2025-11-26 10:20:03,183 | INFO     | mean y: 2610848.393181818
[2025-11-26 05:20:49] 2025-11-26 10:20:03,183 | INFO     | intersect: -242876497.36207438
[2025-11-26 05:20:49] 2025-11-26 10:20:03,183 | INFO     | chi2: 1.6510804621304116
[2025-11-26 05:20:49] 2025-11-26 10:20:03,184 | INFO     | current chi2=1.6510804621304116 (change=53.460253391809864 %)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,184 | INFO     | sum of square deviations: 25523776814.34484
[2025-11-26 05:20:49] 2025-11-26 10:20:03,188 | INFO     | sum of deviations: -15129974408.517204
[2025-11-26 05:20:49] 2025-11-26 10:20:03,188 | INFO     | mean x: 1764139147.1034484
[2025-11-26 05:20:49] 2025-11-26 10:20:03,188 | INFO     | mean y: 2614065.3448275863
[2025-11-26 05:20:49] 2025-11-26 10:20:03,188 | INFO     | intersect: 1048359776.9958354
[2025-11-26 05:20:49] 2025-11-26 10:20:03,189 | INFO     | chi2: 1.593742964639777
[2025-11-26 05:20:49] 2025-11-26 10:20:03,189 | INFO     | current chi2=1.593742964639777 (change=3.472725818380244 %)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,189 | INFO     | left removable region: 20
[2025-11-26 05:20:49] 2025-11-26 10:20:03,190 | INFO     | sum of square deviations: 22002811216.608635
[2025-11-26 05:20:49] 2025-11-26 10:20:03,193 | INFO     | sum of deviations: 32422569325.08696
[2025-11-26 05:20:49] 2025-11-26 10:20:03,193 | INFO     | mean x: 1764139116.6086957
[2025-11-26 05:20:49] 2025-11-26 10:20:03,193 | INFO     | mean y: 2626071.809178744
[2025-11-26 05:20:49] 2025-11-26 10:20:03,194 | INFO     | intersect: -2596947330.1644626
[2025-11-26 05:20:49] 2025-11-26 10:20:03,194 | INFO     | chi2: 0.002220796184822664
[2025-11-26 05:20:49] 2025-11-26 10:20:03,194 | INFO     | current memory leak: 1.47 B/s (using 414 data points, chi2=0.00)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | could have reported an average CPU frequency of 3030 MHz (18 samples)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | ..............................
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | . Timing measurements:
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | . get job = 0 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | . initial setup = 3 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | . payload setup = 18 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,195 | INFO     | . stage-in = 0 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,196 | INFO     | . payload execution = 27104 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,196 | INFO     | . stage-out = 2 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,196 | INFO     | . log creation = 0 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,196 | INFO     | ..............................
[2025-11-26 05:20:49] 2025-11-26 10:20:03,280 | INFO     | 
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | job summary report
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | --------------------------------------------------
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | PanDA job id: 6894239146
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | task id: 47523939
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | errors: (none)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | pilot state: finished 
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | transexitcode: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | exeerrorcode: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | exeerrordiag: 
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | exitcode: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | exitmsg: OK
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | cpuconsumptiontime: 107616 s
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | nevents: 400
[2025-11-26 05:20:49] 2025-11-26 10:20:03,281 | INFO     | neventsw: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | pid: 2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | pgrp: 2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | corecount: 9
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | event service: False
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | sizes: {0: 2283774, 1: 2283973, 12: 2283973, 23: 2284291, 33: 2284291, 27127: 2321371, 27130: 2330369, 27131: 2330425, 27139: 2330619}
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | --------------------------------------------------
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | 
[2025-11-26 05:20:49] 2025-11-26 10:20:03,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | job 6894239146 has completed (purged errors)
[2025-11-26 05:20:49] 2025-11-26 10:20:03,389 | INFO     | overall cleanup function is called
[2025-11-26 05:20:49] 2025-11-26 10:20:04,398 | INFO     | --- collectZombieJob: --- 10, [2052806]
[2025-11-26 05:20:49] 2025-11-26 10:20:04,399 | INFO     | zombie collector waiting for pid 2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:04,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:20:49] 2025-11-26 10:20:04,399 | INFO     | collected zombie processes
[2025-11-26 05:20:49] 2025-11-26 10:20:04,399 | INFO     | will attempt to kill all subprocesses of pid=2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:04,942 | INFO     | process IDs to be killed: [2052806] (in reverse order)
[2025-11-26 05:20:49] 2025-11-26 10:20:05,096 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:20:49] 2025-11-26 10:20:05,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:20:49] 2025-11-26 10:20:05,112 | INFO     | did not find any defunct processes belonging to 2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:05,127 | INFO     | did not find any defunct processes belonging to 2052806
[2025-11-26 05:20:49] 2025-11-26 10:20:05,128 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:20:49] 2025-11-26 10:20:05,129 | INFO     | ready for new job
[2025-11-26 05:20:49] 2025-11-26 10:20:05,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:20:49] 2025-11-26 10:20:05,131 | INFO     | ***************************************
[2025-11-26 05:20:49] 2025-11-26 10:20:05,131 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:20:49] 2025-11-26 10:20:05,132 | INFO     | ***************************************
[2025-11-26 05:20:49] 2025-11-26 10:20:05,132 | INFO     | 
[2025-11-26 05:20:49] 2025-11-26 10:20:05,135 | INFO     | architecture information:
[2025-11-26 05:20:49] 2025-11-26 10:20:05,135 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:20:49] 2025-11-26 10:20:05,160 | INFO     | cat /etc/os-release:
[2025-11-26 05:20:49] NAME="CentOS Linux"
[2025-11-26 05:20:49] VERSION="7 (Core)"
[2025-11-26 05:20:49] ID="centos"
[2025-11-26 05:20:49] ID_LIKE="rhel fedora"
[2025-11-26 05:20:49] VERSION_ID="7"
[2025-11-26 05:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:20:49] ANSI_COLOR="0;31"
[2025-11-26 05:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:20:49] HOME_URL="https://www.centos.org/"
[2025-11-26 05:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:20:49] 
[2025-11-26 05:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:20:49] 
[2025-11-26 05:20:49] 2025-11-26 10:20:05,160 | INFO     | ***************************************
[2025-11-26 05:20:49] 2025-11-26 10:20:05,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 05:20:49] 2025-11-26 10:20:05,712 | INFO     | sufficient remaining disk space (72164048896 B)
[2025-11-26 05:20:49] 2025-11-26 10:20:05,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:20:49] 2025-11-26 10:20:05,713 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:20:49] 2025-11-26 10:20:05,713 | INFO     | update_server=False
[2025-11-26 05:20:49] 2025-11-26 10:20:05,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:20:49] 2025-11-26 10:20:05,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:20:49] 2025-11-26 10:20:05,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:20:49] 2025-11-26 10:20:05,956 | INFO     | all payload control threads have been joined
[2025-11-26 05:20:49] 2025-11-26 10:20:06,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:20:49] 2025-11-26 10:20:06,293 | INFO     | aborting loop
[2025-11-26 05:20:49] 2025-11-26 10:20:06,721 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:06,789 | INFO     | all data control threads have been joined
[2025-11-26 05:20:49] 2025-11-26 10:20:06,806 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:06,868 | INFO     | all job control threads have been joined
[2025-11-26 05:20:49] 2025-11-26 10:20:06,963 | INFO     | [payload] control thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,017 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,108 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,298 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,427 | INFO     | [job] validate thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,582 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,588 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,644 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,722 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,795 | INFO     | [data] control thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:07,876 | INFO     | [job] control thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:08,010 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:08,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:20:49] 2025-11-26 10:20:09,308 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:09,888 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:20:49] 2025-11-26 10:20:35,578 | INFO     | PID=2042850 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:20:49] 2025-11-26 10:20:35,578 | INFO     | .. there are 32 such processes running
[2025-11-26 05:20:49] 2025-11-26 10:20:35,579 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:20:49] 2025-11-26 10:20:35,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:20:49] 2025-11-26 10:20:35,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:20:49] 2025-11-26 10:20:43,232 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:20:49] 2025-11-26 10:20:44,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466163627840)>', '<ExcThread(monitor, started 140465219299072)>']
[2025-11-26 05:20:49] 2025-11-26 10:20:44,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:20:49] 2025-11-26 10:20:44,640 | INFO     | [monitor] control thread has ended
[2025-11-26 05:20:49] 2025-11-26 10:20:49,035 | INFO     | all workflow threads have been joined
[2025-11-26 05:20:49] 2025-11-26 10:20:49,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:20:49] 2025-11-26 10:20:49,036 | INFO     | traces error code: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:49,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:20:49] 2025-11-26 10:20:49,276 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:20:49] 2025-11-26 10:20:49,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:20:49] 2025-11-26 10:20:49,282 [wrapper] pilotpid: 2042850
[2025-11-26 05:20:49] 2025-11-26 10:20:49,284 [wrapper] Pilot exit status: 0
[2025-11-26 05:20:49] 2025-11-26 10:20:49,304 [wrapper] pandaids: 6894239146
[2025-11-26 05:20:49] 2025-11-26 10:20:49,382 [wrapper] cleanup supervisor_pilot 3577663 2042851
[2025-11-26 05:20:49] 2025-11-26 10:20:49,384 [wrapper] Test setup, not cleaning
[2025-11-26 05:20:49] 2025-11-26 10:20:49,389 [wrapper] apfmon messages muted
[2025-11-26 05:20:49] 2025-11-26 10:20:49,392 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:20:49] 2025-11-26 10:20:49,394 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:20:49]  *** Error codes and diagnostics ***
[2025-11-26 05:20:49]     "exeErrorCode": 0,
[2025-11-26 05:20:49]     "exeErrorDiag": "",
[2025-11-26 05:20:49]     "pilotErrorCode": 0,
[2025-11-26 05:20:49]     "pilotErrorDiag": "",
[2025-11-26 05:20:49]  *** Listing of results directory ***
[2025-11-26 05:20:49] total 627828
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:33 queuedata.json
[2025-11-26 05:20:49] -rwx------. 1 boincer umatlas     36292 Nov 25 00:33 runpilot2-wrapper.sh
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:20:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:46 run_atlas
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:46 job.xml
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas 296317559 Nov 25 21:46 EVNT.47523935._000001.pool.root.1
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:46 start_atlas.sh
[2025-11-26 05:20:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:46 shared
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas    589941 Nov 25 21:46 input.tar.gz
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:46 boinc_lockfile
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      2609 Nov 25 21:46 pandaJob.out
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas        57 Nov 25 21:46 setup.sh.local
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas    991877 Nov 25 21:46 agis_schedconf.cvmfs.json
[2025-11-26 05:20:49] drwx------. 5 boincer umatlas      4096 Nov 25 21:46 pilot3
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas 334320867 Nov 26 05:18 HITS.47523939._000020.pool.root.1
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas       532 Nov 26 05:18 boinc_task_state.xml
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas      1046 Nov 26 05:19 memory_monitor_summary.json
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas   1516240 Nov 26 05:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas    658533 Nov 26 05:19 log.47523939._000020.job.log.tgz.1
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas      7817 Nov 26 05:20 heartbeat.json
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas        95 Nov 26 05:20 pilot_heartbeat.json
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 05:20 init_data.xml
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 05:20 boinc_mmap_file
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas        29 Nov 26 05:20 wrapper_checkpoint.txt
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas      4824 Nov 26 05:20 pilotlog.txt
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas   3522891 Nov 26 05:20 log.47523939._000020.job.log.1
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas       357 Nov 26 05:20 output.list
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas       620 Nov 26 05:20 runtime_log
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas   4198400 Nov 26 05:20 result.tar.gz
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 05:20 runtime_log.err
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas       659 Nov 26 05:20 E4JNDmkr0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8AMKDmBpWCKm.diag
[2025-11-26 05:20:49] -rw-r--r--. 1 boincer umatlas      2144 Nov 26 05:20 stderr.txt
[2025-11-26 05:20:49] HITS file was successfully produced:
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas 334320867 Nov 26 05:18 shared/HITS.pool.root.1
[2025-11-26 05:20:49]  *** Contents of shared directory: ***
[2025-11-26 05:20:49] total 620564
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas 296317559 Nov 25 21:46 ATLAS.root_0
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:46 start_atlas.sh
[2025-11-26 05:20:49] -rw-r--r--. 2 boincer umatlas    589941 Nov 25 21:46 input.tar.gz
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas 334320867 Nov 26 05:18 HITS.pool.root.1
[2025-11-26 05:20:49] -rw-------. 1 boincer umatlas   4198400 Nov 26 05:20 result.tar.gz
05:20:50 (2039135): run_atlas exited; CPU time 108757.858410
05:20:50 (2039135): called boinc_finish(0)

</stderr_txt>
]]>

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