Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:51:49 (3362325): wrapper (7.7.26015): starting
19:51:49 (3362325): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:51:49] Arguments: --nthreads 8
[2025-11-25 19:51:49] Threads: 8
[2025-11-25 19:51:49] Checking for CVMFS
[2025-11-25 19:51:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:51:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:51:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:51:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:51:51] 2.13.2.0 5795 32214 174168 153303 3 343 35494459 39288833 8789 16776704 0 23187106 99.578 22011862 36480 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:51:51] CVMFS is ok
[2025-11-25 19:51:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:51:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:51:51] Further information can be found at the LHC@home message board.
[2025-11-25 19:51:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:51:51] Checking for apptainer binary...
[2025-11-25 19:51:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:51:51] Running /usr/bin/apptainer --version
[2025-11-25 19:51:51] apptainer version 1.4.4-1.el9
[2025-11-25 19:51:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:51:51] c-210-14.aglt2.org
[2025-11-25 19:51:51] apptainer works
[2025-11-25 19:51:51] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:51:51] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:51:51] Starting ATLAS job with PandaID=6895882317
[2025-11-25 19:51:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:04:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:04:05] 2025-11-27 17:02:59,716 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 12:04:05] 2025-11-27 17:02:59,777 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.179275
[2025-11-27 12:04:05] 2025-11-27 17:02:59,901 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895882317/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:04:05] 2025-11-27 17:02:59,902 | INFO     | extracted standard info from prmon json
[2025-11-27 12:04:05] 2025-11-27 17:02:59,902 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:04:05] 2025-11-27 17:02:59,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:04:05] 2025-11-27 17:02:59,946 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:04:05] 2025-11-27 17:02:59,949 | INFO     | sum of square deviations: 4122333840447.253
[2025-11-27 12:04:05] 2025-11-27 17:02:59,984 | INFO     | monitor loop #9282: job 0:6895882317 is in state 'finished'
[2025-11-27 12:04:05] 2025-11-27 17:02:59,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:04:05] 2025-11-27 17:03:00,263 | INFO     | sum of deviations: 12273715983096.172
[2025-11-27 12:04:05] 2025-11-27 17:03:00,263 | INFO     | mean x: 1764190692.4795272
[2025-11-27 12:04:05] 2025-11-27 17:03:00,263 | INFO     | mean y: 2954844.880118193
[2025-11-27 12:04:05] 2025-11-27 17:03:00,264 | INFO     | intersect: -5249694828.239566
[2025-11-27 12:04:05] 2025-11-27 17:03:00,267 | INFO     | chi2: 9.77555544675841
[2025-11-27 12:04:05] 2025-11-27 17:03:00,270 | INFO     | sum of square deviations: 4096288425744.6895
[2025-11-27 12:04:05] 2025-11-27 17:03:00,651 | INFO     | sum of deviations: 13061047124690.545
[2025-11-27 12:04:05] 2025-11-27 17:03:00,653 | INFO     | mean x: 1764190539.9885788
[2025-11-27 12:04:05] 2025-11-27 17:03:00,653 | INFO     | mean y: 2959454.0939086294
[2025-11-27 12:04:05] 2025-11-27 17:03:00,653 | INFO     | intersect: -5622175640.131081
[2025-11-27 12:04:05] 2025-11-27 17:03:00,658 | INFO     | chi2: 6.856274746341834
[2025-11-27 12:04:05] 2025-11-27 17:03:00,659 | INFO     | current chi2=6.856274746341834 (change=29.863067283656143 %)
[2025-11-27 12:04:05] 2025-11-27 17:03:00,669 | INFO     | sum of square deviations: 4070353110543.7427
[2025-11-27 12:04:05] 2025-11-27 17:03:00,986 | INFO     | time since job start (144622s) is within the limit (172800.0s)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,433 | INFO     | sum of deviations: 13512176780103.334
[2025-11-27 12:04:05] 2025-11-27 17:03:01,433 | INFO     | mean x: 1764190387.4980924
[2025-11-27 12:04:05] 2025-11-27 17:03:01,434 | INFO     | mean y: 2962104.8516320474
[2025-11-27 12:04:05] 2025-11-27 17:03:01,434 | INFO     | intersect: -5853545117.552174
[2025-11-27 12:04:05] 2025-11-27 17:03:01,436 | INFO     | chi2: 5.496015817439683
[2025-11-27 12:04:05] 2025-11-27 17:03:01,437 | INFO     | current chi2=5.496015817439683 (change=19.83962106576778 %)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,437 | INFO     | right removable region: 2358
[2025-11-27 12:04:05] 2025-11-27 17:03:01,440 | INFO     | sum of square deviations: 4096282096681.715
[2025-11-27 12:04:05] 2025-11-27 17:03:01,579 | INFO     | sum of deviations: 11348048995449.89
[2025-11-27 12:04:05] 2025-11-27 17:03:01,579 | INFO     | mean x: 1764190844.9890018
[2025-11-27 12:04:05] 2025-11-27 17:03:01,579 | INFO     | mean y: 2960263.225465313
[2025-11-27 12:04:05] 2025-11-27 17:03:01,580 | INFO     | intersect: -4884428757.778993
[2025-11-27 12:04:05] 2025-11-27 17:03:01,583 | INFO     | chi2: 6.052437641267842
[2025-11-27 12:04:05] 2025-11-27 17:03:01,583 | INFO     | current chi2=6.052437641267842 (change=38.08599752482771 %)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,587 | INFO     | sum of square deviations: 4070341029033.716
[2025-11-27 12:04:05] 2025-11-27 17:03:01,830 | INFO     | sum of deviations: 10952302711478.557
[2025-11-27 12:04:05] 2025-11-27 17:03:01,830 | INFO     | mean x: 1764190997.4963968
[2025-11-27 12:04:05] 2025-11-27 17:03:01,830 | INFO     | mean y: 2962588.653666808
[2025-11-27 12:04:05] 2025-11-27 17:03:01,830 | INFO     | intersect: -4744048462.170448
[2025-11-27 12:04:05] 2025-11-27 17:03:01,834 | INFO     | chi2: 5.365043475803569
[2025-11-27 12:04:05] 2025-11-27 17:03:01,834 | INFO     | current chi2=5.365043475803569 (change=11.357310991150998 %)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,834 | INFO     | left removable region: 20
[2025-11-27 12:04:05] 2025-11-27 17:03:01,838 | INFO     | sum of square deviations: 3962598377660.358
[2025-11-27 12:04:05] 2025-11-27 17:03:01,965 | INFO     | sum of deviations: 11792822532502.012
[2025-11-27 12:04:05] 2025-11-27 17:03:01,965 | INFO     | mean x: 1764190967.0265183
[2025-11-27 12:04:05] 2025-11-27 17:03:01,965 | INFO     | mean y: 2972660.8224978615
[2025-11-27 12:04:05] 2025-11-27 17:03:01,965 | INFO     | intersect: -5247317427.841658
[2025-11-27 12:04:05] 2025-11-27 17:03:01,968 | INFO     | chi2: 0.8260760721522834
[2025-11-27 12:04:05] 2025-11-27 17:03:01,968 | INFO     | current memory leak: 2.98 B/s (using 2338 data points, chi2=0.83)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,970 | INFO     | could have reported an average CPU frequency of 2596 MHz (82 samples)
[2025-11-27 12:04:05] 2025-11-27 17:03:01,970 | INFO     | ..............................
[2025-11-27 12:04:05] 2025-11-27 17:03:01,970 | INFO     | . Timing measurements:
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . get job = 0 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . initial setup = 5 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . payload setup = 25 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . stage-in = 0 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . payload execution = 144506 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . stage-out = 6 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | . log creation = 1 s
[2025-11-27 12:04:05] 2025-11-27 17:03:01,971 | INFO     | ..............................
[2025-11-27 12:04:05] 2025-11-27 17:03:02,079 | INFO     | 
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | job summary report
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | --------------------------------------------------
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | PanDA job id: 6895882317
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | task id: 47556149
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | errors: (none)
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:04:05] 2025-11-27 17:03:02,080 | INFO     | pilot state: finished 
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | transexitcode: 0
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | exeerrorcode: 0
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | exeerrordiag: 
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | exitcode: 0
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | exitmsg: OK
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | cpuconsumptiontime: 315666 s
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | nevents: 1000
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | neventsw: 0
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | pid: 3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:02,081 | INFO     | pgrp: 3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | corecount: 8
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | event service: False
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284633, 34: 2284661, 144536: 2379267, 144542: 2388261, 144544: 2388317, 144569: 2388563}
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | --------------------------------------------------
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | 
[2025-11-27 12:04:05] 2025-11-27 17:03:02,082 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,105 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:04:05] 2025-11-27 17:03:02,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,105 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:04:05] 2025-11-27 17:03:02,105 | INFO     | job 6895882317 has completed (purged errors)
[2025-11-27 12:04:05] 2025-11-27 17:03:02,105 | INFO     | overall cleanup function is called
[2025-11-27 12:04:05] 2025-11-27 17:03:03,138 | INFO     | --- collectZombieJob: --- 10, [3373183]
[2025-11-27 12:04:05] 2025-11-27 17:03:03,138 | INFO     | zombie collector waiting for pid 3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:03,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:04:05] 2025-11-27 17:03:03,138 | INFO     | collected zombie processes
[2025-11-27 12:04:05] 2025-11-27 17:03:03,138 | INFO     | will attempt to kill all subprocesses of pid=3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:03,663 | INFO     | process IDs to be killed: [3373183] (in reverse order)
[2025-11-27 12:04:05] 2025-11-27 17:03:03,734 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:04:05] 2025-11-27 17:03:03,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:04:05] 2025-11-27 17:03:03,742 | INFO     | did not find any defunct processes belonging to 3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:03,750 | INFO     | did not find any defunct processes belonging to 3373183
[2025-11-27 12:04:05] 2025-11-27 17:03:03,752 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:04:05] 2025-11-27 17:03:03,752 | INFO     | ready for new job
[2025-11-27 12:04:05] 2025-11-27 17:03:03,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:04:05] 2025-11-27 17:03:03,762 | INFO     | ***************************************
[2025-11-27 12:04:05] 2025-11-27 17:03:03,762 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:04:05] 2025-11-27 17:03:03,762 | INFO     | ***************************************
[2025-11-27 12:04:05] 2025-11-27 17:03:03,763 | INFO     | 
[2025-11-27 12:04:05] 2025-11-27 17:03:03,765 | INFO     | architecture information:
[2025-11-27 12:04:05] 2025-11-27 17:03:03,765 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:04:05] 2025-11-27 17:03:03,782 | INFO     | cat /etc/os-release:
[2025-11-27 12:04:05] NAME="CentOS Linux"
[2025-11-27 12:04:05] VERSION="7 (Core)"
[2025-11-27 12:04:05] ID="centos"
[2025-11-27 12:04:05] ID_LIKE="rhel fedora"
[2025-11-27 12:04:05] VERSION_ID="7"
[2025-11-27 12:04:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:04:05] ANSI_COLOR="0;31"
[2025-11-27 12:04:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:04:05] HOME_URL="https://www.centos.org/"
[2025-11-27 12:04:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:04:05] 
[2025-11-27 12:04:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:04:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:04:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:04:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:04:05] 
[2025-11-27 12:04:05] 2025-11-27 17:03:03,783 | INFO     | ***************************************
[2025-11-27 12:04:05] 2025-11-27 17:03:04,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 12:04:05] 2025-11-27 17:03:04,353 | INFO     | sufficient remaining disk space (50994348032 B)
[2025-11-27 12:04:05] 2025-11-27 17:03:04,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:04:05] 2025-11-27 17:03:04,354 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:04:05] 2025-11-27 17:03:04,354 | INFO     | update_server=False
[2025-11-27 12:04:05] 2025-11-27 17:03:04,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:04:05] 2025-11-27 17:03:04,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:04:05] 2025-11-27 17:03:04,377 | INFO     | aborting loop
[2025-11-27 12:04:05] 2025-11-27 17:03:04,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:04:05] 2025-11-27 17:03:04,535 | INFO     | all payload control threads have been joined
[2025-11-27 12:04:05] 2025-11-27 17:03:04,737 | INFO     | all job control threads have been joined
[2025-11-27 12:04:05] 2025-11-27 17:03:04,937 | INFO     | all data control threads have been joined
[2025-11-27 12:04:05] 2025-11-27 17:03:05,360 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,382 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,541 | INFO     | [payload] control thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,619 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,654 | INFO     | [job] validate thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,743 | INFO     | [job] control thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,873 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,943 | INFO     | [data] control thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:05,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:04:05] 2025-11-27 17:03:06,198 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:06,384 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:06,452 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:06,843 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:07,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:04:05] 2025-11-27 17:03:08,100 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:09,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:04:05] 2025-11-27 17:03:35,436 | INFO     | PID=3366352 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:04:05] 2025-11-27 17:03:35,437 | INFO     | .. there are 7 such processes running
[2025-11-27 12:04:05] 2025-11-27 17:03:35,438 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:04:05] 2025-11-27 17:03:35,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:04:05] 2025-11-27 17:03:35,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:04:05] 2025-11-27 17:03:57,325 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:04:05] 2025-11-27 17:03:58,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993576511296)>', '<ExcThread(monitor, started 139993074870016)>']
[2025-11-27 12:04:05] 2025-11-27 17:03:58,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:04:05] 2025-11-27 17:03:58,607 | INFO     | [monitor] control thread has ended
[2025-11-27 12:04:05] 2025-11-27 17:04:03,596 | INFO     | all workflow threads have been joined
[2025-11-27 12:04:05] 2025-11-27 17:04:03,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:04:05] 2025-11-27 17:04:03,596 | INFO     | traces error code: 0
[2025-11-27 12:04:05] 2025-11-27 17:04:03,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:04:05] 2025-11-27 17:04:03,902 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:04:05] 2025-11-27 17:04:03,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:04:05] 2025-11-27 17:04:04,005 [wrapper] pilotpid: 3366352
[2025-11-27 12:04:05] 2025-11-27 17:04:04,061 [wrapper] Pilot exit status: 0
[2025-11-27 12:04:05] 2025-11-27 17:04:04,302 [wrapper] pandaids: 6895882317
[2025-11-27 12:04:05] 2025-11-27 17:04:04,868 [wrapper] cleanup supervisor_pilot 2698056 3366353
[2025-11-27 12:04:05] 2025-11-27 17:04:04,879 [wrapper] Test setup, not cleaning
[2025-11-27 12:04:05] 2025-11-27 17:04:04,896 [wrapper] apfmon messages muted
[2025-11-27 12:04:05] 2025-11-27 17:04:04,955 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:04:05] 2025-11-27 17:04:05,031 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:04:05]  *** Error codes and diagnostics ***
[2025-11-27 12:04:05]     "exeErrorCode": 0,
[2025-11-27 12:04:05]     "exeErrorDiag": "",
[2025-11-27 12:04:05]     "pilotErrorCode": 0,
[2025-11-27 12:04:05]     "pilotErrorDiag": "",
[2025-11-27 12:04:05]  *** Listing of results directory ***
[2025-11-27 12:04:05] total 1347428
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-27 12:04:05] -rwx------. 1 boincer umatlas     36292 Nov 24 11:33 runpilot2-wrapper.sh
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:33 queuedata.json
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:04:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:51 run_atlas
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:51 job.xml
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas 411678964 Nov 25 19:51 EVNT.47483658._001385.pool.root.1
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:51 start_atlas.sh
[2025-11-27 12:04:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:51 shared
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 19:51 input.tar.gz
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:51 boinc_lockfile
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 19:51 pandaJob.out
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas        57 Nov 25 19:51 setup.sh.local
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas    991877 Nov 25 19:52 agis_schedconf.cvmfs.json
[2025-11-27 12:04:05] drwx------. 5 boincer umatlas      4096 Nov 25 19:52 pilot3
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas       534 Nov 27 11:49 boinc_task_state.xml
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas 919663020 Nov 27 12:01 HITS.47556149._003713.pool.root.1
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas      1058 Nov 27 12:02 memory_monitor_summary.json
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas   3191610 Nov 27 12:02 log.47556149._003713.job.log.tgz.1
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas      6663 Nov 27 12:02 init_data.xml
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas      8622 Nov 27 12:03 heartbeat.json
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas        95 Nov 27 12:03 pilot_heartbeat.json
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas      4823 Nov 27 12:04 pilotlog.txt
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas        30 Nov 27 12:04 wrapper_checkpoint.txt
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:04 boinc_mmap_file
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas  19057556 Nov 27 12:04 log.47556149._003713.job.log.1
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas       353 Nov 27 12:04 output.list
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:04 runtime_log
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas  22272000 Nov 27 12:04 result.tar.gz
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 12:04 runtime_log.err
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas       663 Nov 27 12:04 dJJNDmFgoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVlLKDm2XWylm.diag
[2025-11-27 12:04:05] -rw-r--r--. 1 boincer umatlas     21350 Nov 27 12:04 stderr.txt
[2025-11-27 12:04:05] HITS file was successfully produced:
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas 919663020 Nov 27 12:01 shared/HITS.pool.root.1
[2025-11-27 12:04:05]  *** Contents of shared directory: ***
[2025-11-27 12:04:05] total 1322496
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas 411678964 Nov 25 19:51 ATLAS.root_0
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:51 start_atlas.sh
[2025-11-27 12:04:05] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 19:51 input.tar.gz
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas 919663020 Nov 27 12:01 HITS.pool.root.1
[2025-11-27 12:04:05] -rw-------. 1 boincer umatlas  22272000 Nov 27 12:04 result.tar.gz
12:04:27 (3362325): run_atlas exited; CPU time 317975.415307
12:04:27 (3362325): called boinc_finish(0)

</stderr_txt>
]]>

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