Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:54:27 (481104): wrapper (7.7.26015): starting
20:54:27 (481104): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:54:27] Arguments: --nthreads 8
[2025-11-25 20:54:27] Threads: 8
[2025-11-25 20:54:27] Checking for CVMFS
[2025-11-25 20:54:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:54:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:54:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:54:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:54:27] 2.13.3.0 15397 29277 230616 153304 2 700 29339951 32935937 46227 16776704 0 296098298 99.622 284289803 36421 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:54:27] CVMFS is ok
[2025-11-25 20:54:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:54:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:54:27] Further information can be found at the LHC@home message board.
[2025-11-25 20:54:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:54:27] Checking for apptainer binary...
[2025-11-25 20:54:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:54:27] Running /usr/bin/apptainer --version
[2025-11-25 20:54:27] apptainer version 1.4.4-1.el9
[2025-11-25 20:54:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:54:28] c7-16-8.aglt2.org
[2025-11-25 20:54:28] apptainer works
[2025-11-25 20:54:28] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:54:28] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:54:28] Starting ATLAS job with PandaID=6896577501
[2025-11-25 20:54:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:31:40 (1289101): wrapper (7.7.26015): starting
22:31:40 (1289101): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:31:40] Arguments: --nthreads 8
[2025-11-25 22:31:40] Threads: 8
[2025-11-25 22:31:40] This job has been restarted, cleaning up previous attempt
[2025-11-25 22:31:40] Checking for CVMFS
[2025-11-25 22:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:31:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:31:40] 2.13.3.0 15397 29374 237292 153307 1 747 31012748 32935936 35055 16776704 0 297281663 99.623 284852886 36428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:31:40] CVMFS is ok
[2025-11-25 22:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:31:40] Further information can be found at the LHC@home message board.
[2025-11-25 22:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:31:40] Checking for apptainer binary...
[2025-11-25 22:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:31:40] Running /usr/bin/apptainer --version
[2025-11-25 22:31:40] apptainer version 1.4.4-1.el9
[2025-11-25 22:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:31:40] c7-16-8.aglt2.org
[2025-11-25 22:31:40] apptainer works
[2025-11-25 22:31:40] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:31:40] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:31:40] Starting ATLAS job with PandaID=6896577501
[2025-11-25 22:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:35:50]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:35:50] 2025-11-27 01:31:07,522 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 20:35:50] 2025-11-27 01:31:07,528 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3270.2964270833327
[2025-11-26 20:35:50] 2025-11-27 01:31:07,541 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6896577501/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,541 | INFO     | extracted standard info from prmon json
[2025-11-26 20:35:50] 2025-11-27 01:31:07,542 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:35:50] 2025-11-27 01:31:07,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:35:50] 2025-11-27 01:31:07,556 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:35:50] 2025-11-27 01:31:07,557 | INFO     | sum of square deviations: 676548772738.7596
[2025-11-26 20:35:50] 2025-11-27 01:31:07,582 | INFO     | sum of deviations: 3451419430640.8433
[2025-11-26 20:35:50] 2025-11-27 01:31:07,582 | INFO     | mean x: 1764167468.6831148
[2025-11-26 20:35:50] 2025-11-27 01:31:07,582 | INFO     | mean y: 3136703.1480339244
[2025-11-26 20:35:50] 2025-11-27 01:31:07,582 | INFO     | intersect: -8996778935.851307
[2025-11-26 20:35:50] 2025-11-27 01:31:07,583 | INFO     | chi2: 5.254053096806968
[2025-11-26 20:35:50] 2025-11-27 01:31:07,583 | INFO     | sum of square deviations: 668754794501.4178
[2025-11-26 20:35:50] 2025-11-27 01:31:07,609 | INFO     | sum of deviations: 3785251532428.598
[2025-11-26 20:35:50] 2025-11-27 01:31:07,609 | INFO     | mean x: 1764167316.1857586
[2025-11-26 20:35:50] 2025-11-27 01:31:07,609 | INFO     | mean y: 3143227.9891640865
[2025-11-26 20:35:50] 2025-11-27 01:31:07,609 | INFO     | intersect: -9982305985.920631
[2025-11-26 20:35:50] 2025-11-27 01:31:07,610 | INFO     | chi2: 3.162077130330879
[2025-11-26 20:35:50] 2025-11-27 01:31:07,611 | INFO     | current chi2=3.162077130330879 (change=39.81642225403926 %)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,612 | INFO     | sum of square deviations: 661020910414.0575
[2025-11-26 20:35:50] 2025-11-27 01:31:07,642 | INFO     | sum of deviations: 3747423714424.718
[2025-11-26 20:35:50] 2025-11-27 01:31:07,642 | INFO     | mean x: 1764167163.6884227
[2025-11-26 20:35:50] 2025-11-27 01:31:07,642 | INFO     | mean y: 3142482.0815850818
[2025-11-26 20:35:50] 2025-11-27 01:31:07,642 | INFO     | intersect: -9998177841.165476
[2025-11-26 20:35:50] 2025-11-27 01:31:07,643 | INFO     | chi2: 3.1618258699536463
[2025-11-26 20:35:50] 2025-11-27 01:31:07,643 | INFO     | current chi2=3.1618258699536463 (change=0.007946054662062375 %)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,643 | INFO     | right removable region: 1286
[2025-11-26 20:35:50] 2025-11-27 01:31:07,644 | INFO     | sum of square deviations: 668754254041.4176
[2025-11-26 20:35:50] 2025-11-27 01:31:07,675 | INFO     | sum of deviations: 3093284590261.662
[2025-11-26 20:35:50] 2025-11-27 01:31:07,675 | INFO     | mean x: 1764167621.1857586
[2025-11-26 20:35:50] 2025-11-27 01:31:07,676 | INFO     | mean y: 3143702.7972136224
[2025-11-26 20:35:50] 2025-11-27 01:31:07,676 | INFO     | intersect: -8156912826.599473
[2025-11-26 20:35:50] 2025-11-27 01:31:07,677 | INFO     | chi2: 3.2750886087612083
[2025-11-26 20:35:50] 2025-11-27 01:31:07,677 | INFO     | current chi2=3.2750886087612083 (change=37.66548322947917 %)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,678 | INFO     | sum of square deviations: 661019829494.0574
[2025-11-26 20:35:50] 2025-11-27 01:31:07,716 | INFO     | sum of deviations: 2956212030260.4053
[2025-11-26 20:35:50] 2025-11-27 01:31:07,716 | INFO     | mean x: 1764167773.6884227
[2025-11-26 20:35:50] 2025-11-27 01:31:07,716 | INFO     | mean y: 3146405.0808080807
[2025-11-26 20:35:50] 2025-11-27 01:31:07,716 | INFO     | intersect: -7886562440.669209
[2025-11-26 20:35:50] 2025-11-27 01:31:07,717 | INFO     | chi2: 3.124520485495718
[2025-11-26 20:35:50] 2025-11-27 01:31:07,717 | INFO     | current chi2=3.124520485495718 (change=4.597375559937672 %)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,717 | INFO     | left removable region: 20
[2025-11-26 20:35:50] 2025-11-27 01:31:07,718 | INFO     | sum of square deviations: 629187415054.4392
[2025-11-26 20:35:50] 2025-11-27 01:31:07,746 | INFO     | sum of deviations: 3026402646228.707
[2025-11-26 20:35:50] 2025-11-27 01:31:07,747 | INFO     | mean x: 1764167743.199842
[2025-11-26 20:35:50] 2025-11-27 01:31:07,747 | INFO     | mean y: 3156638.5505529228
[2025-11-26 20:35:50] 2025-11-27 01:31:07,747 | INFO     | intersect: -8482521553.136376
[2025-11-26 20:35:50] 2025-11-27 01:31:07,748 | INFO     | chi2: 0.8607154488007505
[2025-11-26 20:35:50] 2025-11-27 01:31:07,748 | INFO     | current memory leak: 4.81 B/s (using 1266 data points, chi2=0.86)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | could have reported an average CPU frequency of 3216 MHz (47 samples)
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | ..............................
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . Timing measurements:
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . get job = 0 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . initial setup = 1 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . payload setup = 6 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . stage-in = 0 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . payload execution = 79121 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . stage-out = 2 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,749 | INFO     | . log creation = 0 s
[2025-11-26 20:35:50] 2025-11-27 01:31:07,750 | INFO     | ..............................
[2025-11-26 20:35:50] 2025-11-27 01:31:07,750 | INFO     | time since job start (79156s) is within the limit (172800.0s)
[2025-11-26 20:35:50] 2025-11-27 01:31:08,167 | INFO     | 
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | job summary report
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | --------------------------------------------------
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | PanDA job id: 6896577501
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | task id: 47556161
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | errors: (none)
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | pilot state: finished 
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | transexitcode: 0
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | exeerrorcode: 0
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | exeerrordiag: 
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | exitcode: 0
[2025-11-26 20:35:50] 2025-11-27 01:31:08,173 | INFO     | exitmsg: OK
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | cpuconsumptiontime: 196906 s
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | nevents: 1000
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | neventsw: 0
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | pid: 1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | pgrp: 1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | corecount: 8
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | event service: False
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | sizes: {0: 2284262, 5: 2284524, 11: 2284580, 79131: 2345694, 79134: 2354744, 79140: 2354934}
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | --------------------------------------------------
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | 
[2025-11-26 20:35:50] 2025-11-27 01:31:08,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 20:35:50] 2025-11-27 01:31:08,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,195 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,195 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:35:50] 2025-11-27 01:31:08,197 | INFO     | job 6896577501 has completed (purged errors)
[2025-11-26 20:35:50] 2025-11-27 01:31:08,197 | INFO     | overall cleanup function is called
[2025-11-26 20:35:50] 2025-11-27 01:31:09,214 | INFO     | --- collectZombieJob: --- 10, [1374384]
[2025-11-26 20:35:50] 2025-11-27 01:31:09,214 | INFO     | zombie collector waiting for pid 1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:09,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:35:50] 2025-11-27 01:31:09,214 | INFO     | collected zombie processes
[2025-11-26 20:35:50] 2025-11-27 01:31:09,214 | INFO     | will attempt to kill all subprocesses of pid=1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:09,848 | INFO     | process IDs to be killed: [1374384] (in reverse order)
[2025-11-26 20:35:50] 2025-11-27 01:31:10,061 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:35:50] 2025-11-27 01:31:10,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:35:50] 2025-11-27 01:31:10,090 | INFO     | did not find any defunct processes belonging to 1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:10,119 | INFO     | did not find any defunct processes belonging to 1374384
[2025-11-26 20:35:50] 2025-11-27 01:31:10,120 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:35:50] 2025-11-27 01:31:10,120 | INFO     | ready for new job
[2025-11-26 20:35:50] 2025-11-27 01:31:10,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:35:50] 2025-11-27 01:31:10,125 | INFO     | ***************************************
[2025-11-26 20:35:50] 2025-11-27 01:31:10,125 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:35:50] 2025-11-27 01:31:10,125 | INFO     | ***************************************
[2025-11-26 20:35:50] 2025-11-27 01:31:10,125 | INFO     | 
[2025-11-26 20:35:50] 2025-11-27 01:31:10,130 | INFO     | architecture information:
[2025-11-26 20:35:50] 2025-11-27 01:31:10,131 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:35:50] 2025-11-27 01:31:10,146 | INFO     | cat /etc/os-release:
[2025-11-26 20:35:50] NAME="CentOS Linux"
[2025-11-26 20:35:50] VERSION="7 (Core)"
[2025-11-26 20:35:50] ID="centos"
[2025-11-26 20:35:50] ID_LIKE="rhel fedora"
[2025-11-26 20:35:50] VERSION_ID="7"
[2025-11-26 20:35:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:35:50] ANSI_COLOR="0;31"
[2025-11-26 20:35:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:35:50] HOME_URL="https://www.centos.org/"
[2025-11-26 20:35:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:35:50] 
[2025-11-26 20:35:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:35:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:35:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:35:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:35:50] 
[2025-11-26 20:35:50] 2025-11-27 01:31:10,147 | INFO     | ***************************************
[2025-11-26 20:35:50] 2025-11-27 01:31:10,649 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 20:35:50] 2025-11-27 01:31:10,667 | INFO     | sufficient remaining disk space (66268954624 B)
[2025-11-26 20:35:50] 2025-11-27 01:31:10,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:35:50] 2025-11-27 01:31:10,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:35:50] 2025-11-27 01:31:10,668 | INFO     | update_server=False
[2025-11-26 20:35:50] 2025-11-27 01:31:10,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:35:50] 2025-11-27 01:31:10,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:35:50] 2025-11-27 01:31:10,687 | INFO     | all job control threads have been joined
[2025-11-26 20:35:50] 2025-11-27 01:31:10,697 | INFO     | all payload control threads have been joined
[2025-11-26 20:35:50] 2025-11-27 01:31:10,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:35:50] 2025-11-27 01:31:10,927 | INFO     | aborting loop
[2025-11-26 20:35:50] 2025-11-27 01:31:11,637 | INFO     | all data control threads have been joined
[2025-11-26 20:35:50] 2025-11-27 01:31:11,673 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:11,692 | INFO     | [job] control thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:11,702 | INFO     | [payload] control thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:11,882 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:11,931 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,088 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,171 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,272 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,387 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,642 | INFO     | [data] control thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,677 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:12,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:35:50] 2025-11-27 01:31:12,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:35:50] 2025-11-27 01:31:13,003 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:13,035 | INFO     | [job] validate thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:13,837 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:16,751 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:21,268 | INFO     | job.realtimelogging is not enabled
[2025-11-26 20:35:50] 2025-11-27 01:31:22,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:35:50] 2025-11-27 01:31:41,625 | INFO     | PID=1317363 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:35:50] 2025-11-27 01:31:41,625 | INFO     | .. there are 70 such processes running
[2025-11-26 20:35:50] 2025-11-27 01:31:41,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:35:50] 2025-11-27 01:31:41,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:35:50] 2025-11-27 01:31:41,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:35:50] 2025-11-27 01:31:58,381 [wrapper] supervise_pilot (15 min periods counter: 89)
[2025-11-26 20:35:50] 2025-11-27 01:32:09,764 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:35:50] 2025-11-27 01:32:10,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190697051968)>', '<ExcThread(monitor, started 140189938738944)>']
[2025-11-26 20:35:50] 2025-11-27 01:32:10,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:35:50] 2025-11-27 01:32:10,775 | INFO     | [monitor] control thread has ended
[2025-11-26 20:35:50] 2025-11-27 01:32:15,205 | INFO     | all workflow threads have been joined
[2025-11-26 20:35:50] 2025-11-27 01:32:15,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:35:50] 2025-11-27 01:32:15,206 | INFO     | traces error code: 0
[2025-11-26 20:35:50] 2025-11-27 01:32:15,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:35:50] 2025-11-27 01:32:15,344 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:35:50] 2025-11-27 01:32:15,347 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:35:50] 2025-11-27 01:32:15,352 [wrapper] pilotpid: 1317363
[2025-11-26 20:35:50] 2025-11-27 01:32:15,355 [wrapper] Pilot exit status: 0
[2025-11-26 20:35:50] 2025-11-27 01:32:15,363 [wrapper] pandaids: 6896577501 6896577501
[2025-11-26 20:35:50] 2025-11-27 01:32:15,518 [wrapper] cleanup supervisor_pilot 3682377 1317364
[2025-11-26 20:35:50] 2025-11-27 01:32:15,522 [wrapper] Test setup, not cleaning
[2025-11-26 20:35:50] 2025-11-27 01:32:15,525 [wrapper] apfmon messages muted
[2025-11-26 20:35:50] 2025-11-27 01:32:15,528 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:35:50] 2025-11-27 01:32:15,530 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:35:50]  *** Error codes and diagnostics ***
[2025-11-26 20:35:50]     "exeErrorCode": 0,
[2025-11-26 20:35:50]     "exeErrorDiag": "",
[2025-11-26 20:35:50]     "pilotErrorCode": 0,
[2025-11-26 20:35:50]     "pilotErrorDiag": "",
[2025-11-26 20:35:50]  *** Listing of results directory ***
[2025-11-26 20:35:50] total 1720856
[2025-11-26 20:35:50] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 20:35:50] -rwx------. 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:35:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:54 run_atlas
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:54 job.xml
[2025-11-26 20:35:50] -rw-r--r--. 3 boincer umatlas 408937340 Nov 25 20:54 EVNT.47483658._002092.pool.root.1
[2025-11-26 20:35:50] -rw-r--r--. 3 boincer umatlas 408937340 Nov 25 20:54 ATLAS.root_0
[2025-11-26 20:35:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:54 start_atlas.sh
[2025-11-26 20:35:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:54 shared
[2025-11-26 20:35:50] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 20:54 input.tar.gz
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:54 boinc_lockfile
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 22:31 pandaJob.out
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas        57 Nov 25 22:31 setup.sh.local
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas    991877 Nov 25 22:31 agis_schedconf.cvmfs.json
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:25 boinc_task_state.xml
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 20:30 init_data.xml
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas 915747035 Nov 26 20:30 HITS.47556161._000757.pool.root.1
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas        96 Nov 26 20:30 pilot_heartbeat.json
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas      1072 Nov 26 20:30 memory_monitor_summary.json
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:31 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas   2337666 Nov 26 20:31 log.47556161._000757.job.log.tgz.1
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas      7953 Nov 26 20:31 heartbeat.json
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas      4896 Nov 26 20:32 pilotlog.txt
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas   9962489 Nov 26 20:32 log.47556161._000757.job.log.1
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas       353 Nov 26 20:32 output.list
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:32 runtime_log
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas  12318720 Nov 26 20:32 result.tar.gz
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas      9423 Nov 26 20:32 runtime_log.err
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas       790 Nov 26 20:32 8nMODmiW0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdLJKDmKpZmnm.diag
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:35 wrapper_checkpoint.txt
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:35 boinc_mmap_file
[2025-11-26 20:35:50] -rw-r--r--. 1 boincer umatlas     23416 Nov 26 20:35 stderr.txt
[2025-11-26 20:35:50] HITS file was successfully produced:
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas 915747035 Nov 26 20:30 shared/HITS.pool.root.1
[2025-11-26 20:35:50]  *** Contents of shared directory: ***
[2025-11-26 20:35:50] total 1306284
[2025-11-26 20:35:50] -rw-r--r--. 3 boincer umatlas 408937340 Nov 25 20:54 ATLAS.root_0
[2025-11-26 20:35:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:54 start_atlas.sh
[2025-11-26 20:35:50] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 20:54 input.tar.gz
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas 915747035 Nov 26 20:30 HITS.pool.root.1
[2025-11-26 20:35:50] -rw-------. 1 boincer umatlas  12318720 Nov 26 20:32 result.tar.gz
20:35:52 (1289101): run_atlas exited; CPU time 199456.162663
20:35:52 (1289101): called boinc_finish(0)

</stderr_txt>
]]>

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