Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
04:41:26 (3872966): wrapper (7.7.26015): starting
04:41:26 (3872966): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 04:41:26] Arguments: --nthreads 10
[2025-11-27 04:41:26] Threads: 10
[2025-11-27 04:41:26] Checking for CVMFS
[2025-11-27 04:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:41:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:41:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:41:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:41:27] 2.13.3.0 4524 9159 66320 153364 2 81 3836629 4096000 12871 130560 0 1266483434 99.999 1301169 711 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-27 04:41:27] CVMFS is ok
[2025-11-27 04:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:41:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 04:41:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 04:41:27] Further information can be found at the LHC@home message board.
[2025-11-27 04:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:41:27] Checking for apptainer binary...
[2025-11-27 04:41:27] apptainer is not installed, using version from CVMFS
[2025-11-27 04:41:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:41:27] 7950x-linux
[2025-11-27 04:41:27] apptainer works
[2025-11-27 04:41:27] Set ATHENA_PROC_NUMBER=10
[2025-11-27 04:41:27] Set ATHENA_CORE_NUMBER=10
[2025-11-27 04:41:27] Starting ATLAS job with PandaID=6896577809
[2025-11-27 04:41:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc514/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:19:29]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:19:29] 2025-11-28 05:18:50,764 | INFO     | PID=3876839 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:19:29] 2025-11-28 05:18:50,764 | INFO     | .. there are 14 such processes running
[2025-11-27 21:19:29] 2025-11-28 05:18:51,766 | INFO     | time since job start (59828s) is within the limit (172800.0s)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,820 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 21:19:29] 2025-11-28 05:18:51,822 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.85959375
[2025-11-27 21:19:29] 2025-11-28 05:18:51,826 | INFO     | using path: /var/lib/multiboinc/boinc514/slots/1/PanDA_Pilot-6896577809/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,826 | INFO     | extracted standard info from prmon json
[2025-11-27 21:19:29] 2025-11-28 05:18:51,826 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:19:29] 2025-11-28 05:18:51,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:19:29] 2025-11-28 05:18:51,834 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:19:29] 2025-11-28 05:18:51,835 | INFO     | sum of square deviations: 292741972530.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,849 | INFO     | sum of deviations: 2054045038584.9998
[2025-11-27 21:19:29] 2025-11-28 05:18:51,849 | INFO     | mean x: 1764277223.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,849 | INFO     | mean y: 3153311.71049949
[2025-11-27 21:19:29] 2025-11-28 05:18:51,849 | INFO     | intersect: -12376024314.484856
[2025-11-27 21:19:29] 2025-11-28 05:18:51,850 | INFO     | chi2: 6.035299971344646
[2025-11-27 21:19:29] 2025-11-28 05:18:51,851 | INFO     | sum of square deviations: 288288568100.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,863 | INFO     | sum of deviations: 2411685452276.5
[2025-11-27 21:19:29] 2025-11-28 05:18:51,863 | INFO     | mean x: 1764277070.5
[2025-11-27 21:19:29] 2025-11-28 05:18:51,864 | INFO     | mean y: 3165553.105532787
[2025-11-27 21:19:29] 2025-11-28 05:18:51,864 | INFO     | intersect: -14755939786.215242
[2025-11-27 21:19:29] 2025-11-28 05:18:51,864 | INFO     | chi2: 2.8139001924792533
[2025-11-27 21:19:29] 2025-11-28 05:18:51,864 | INFO     | current chi2=2.8139001924792533 (change=53.37596795785571 %)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,865 | INFO     | sum of square deviations: 283880559870.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,899 | INFO     | sum of deviations: 2486762207953.001
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | mean x: 1764276918.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | mean y: 3168145.184346035
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | intersect: -15451701910.219692
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | chi2: 2.514320286872878
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | current chi2=2.514320286872878 (change=10.646429692391587 %)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,900 | INFO     | right removable region: 970
[2025-11-27 21:19:29] 2025-11-28 05:18:51,901 | INFO     | sum of square deviations: 288288568100.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,918 | INFO     | sum of deviations: 1750457530520.4998
[2025-11-27 21:19:29] 2025-11-28 05:18:51,918 | INFO     | mean x: 1764277375.5
[2025-11-27 21:19:29] 2025-11-28 05:18:51,919 | INFO     | mean y: 3163695.9723360655
[2025-11-27 21:19:29] 2025-11-28 05:18:51,919 | INFO     | intersect: -10709340924.743904
[2025-11-27 21:19:29] 2025-11-28 05:18:51,919 | INFO     | chi2: 3.744837411158273
[2025-11-27 21:19:29] 2025-11-28 05:18:51,919 | INFO     | current chi2=3.744837411158273 (change=37.95109722899266 %)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,920 | INFO     | sum of square deviations: 283880559870.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,948 | INFO     | sum of deviations: 1672998752538.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,948 | INFO     | mean x: 1764277528.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,948 | INFO     | mean y: 3166375.1462409887
[2025-11-27 21:19:29] 2025-11-28 05:18:51,948 | INFO     | intersect: -10394284245.729296
[2025-11-27 21:19:29] 2025-11-28 05:18:51,949 | INFO     | chi2: 3.6865921581082004
[2025-11-27 21:19:29] 2025-11-28 05:18:51,949 | INFO     | current chi2=3.6865921581082004 (change=1.5553479805698052 %)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,949 | INFO     | left removable region: 20
[2025-11-27 21:19:29] 2025-11-28 05:18:51,949 | INFO     | sum of square deviations: 265857403337.5
[2025-11-27 21:19:29] 2025-11-28 05:18:51,966 | INFO     | sum of deviations: 2007233458147.0
[2025-11-27 21:19:29] 2025-11-28 05:18:51,966 | INFO     | mean x: 1764277497.5
[2025-11-27 21:19:29] 2025-11-28 05:18:51,966 | INFO     | mean y: 3185048.383157895
[2025-11-27 21:19:29] 2025-11-28 05:18:51,970 | INFO     | intersect: -13317176837.278675
[2025-11-27 21:19:29] 2025-11-28 05:18:51,971 | INFO     | chi2: 0.12344941530519979
[2025-11-27 21:19:29] 2025-11-28 05:18:51,971 | INFO     | current memory leak: 7.55 B/s (using 950 data points, chi2=0.12)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | ..............................
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . Timing measurements:
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . get job = 0 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . initial setup = 3 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . payload setup = 6 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . stage-in = 0 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . payload execution = 59787 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . stage-out = 3 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | . log creation = 0 s
[2025-11-27 21:19:29] 2025-11-28 05:18:51,972 | INFO     | ..............................
[2025-11-27 21:19:29] 2025-11-28 05:18:52,396 | INFO     | 
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | job summary report
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | --------------------------------------------------
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | PanDA job id: 6896577809
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | task id: 47556161
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | errors: (none)
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | pilot state: finished 
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | transexitcode: 0
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | exeerrorcode: 0
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | exeerrordiag: 
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | exitcode: 0
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | exitmsg: OK
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | cpuconsumptiontime: 133418 s
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | nevents: 1000
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | neventsw: 0
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | pid: 3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | pgrp: 3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | corecount: 10
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | event service: False
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | sizes: {0: 2284105, 1: 2284304, 6: 2284566, 11: 2284594, 59797: 2336993, 59801: 2346015, 59804: 2346199, 59811: 2346445}
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | --------------------------------------------------
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | 
[2025-11-27 21:19:29] 2025-11-28 05:18:52,397 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc514/slots/1
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | job 6896577809 has completed (purged errors)
[2025-11-27 21:19:29] 2025-11-28 05:18:52,430 | INFO     | overall cleanup function is called
[2025-11-27 21:19:29] 2025-11-28 05:18:53,449 | INFO     | --- collectZombieJob: --- 10, [3883527]
[2025-11-27 21:19:29] 2025-11-28 05:18:53,450 | INFO     | zombie collector waiting for pid 3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:53,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:19:29] 2025-11-28 05:18:53,450 | INFO     | collected zombie processes
[2025-11-27 21:19:29] 2025-11-28 05:18:53,450 | INFO     | will attempt to kill all subprocesses of pid=3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:53,776 | INFO     | process IDs to be killed: [3883527] (in reverse order)
[2025-11-27 21:19:29] 2025-11-28 05:18:53,893 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:19:29] 2025-11-28 05:18:53,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:19:29] 2025-11-28 05:18:53,899 | INFO     | did not find any defunct processes belonging to 3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:53,903 | INFO     | did not find any defunct processes belonging to 3883527
[2025-11-27 21:19:29] 2025-11-28 05:18:53,904 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:19:29] 2025-11-28 05:18:53,904 | INFO     | ready for new job
[2025-11-27 21:19:29] 2025-11-28 05:18:53,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:19:29] 2025-11-28 05:18:53,908 | INFO     | ***************************************
[2025-11-27 21:19:29] 2025-11-28 05:18:53,908 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:19:29] 2025-11-28 05:18:53,908 | INFO     | ***************************************
[2025-11-27 21:19:29] 2025-11-28 05:18:53,908 | INFO     | 
[2025-11-27 21:19:29] 2025-11-28 05:18:53,909 | INFO     | architecture information:
[2025-11-27 21:19:29] 2025-11-28 05:18:53,913 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:19:29] 2025-11-28 05:18:53,937 | INFO     | cat /etc/os-release:
[2025-11-27 21:19:29] NAME="CentOS Linux"
[2025-11-27 21:19:29] VERSION="7 (Core)"
[2025-11-27 21:19:29] ID="centos"
[2025-11-27 21:19:29] ID_LIKE="rhel fedora"
[2025-11-27 21:19:29] VERSION_ID="7"
[2025-11-27 21:19:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:19:29] ANSI_COLOR="0;31"
[2025-11-27 21:19:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:19:29] HOME_URL="https://www.centos.org/"
[2025-11-27 21:19:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:19:29] 
[2025-11-27 21:19:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:19:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:19:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:19:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:19:29] 
[2025-11-27 21:19:29] 2025-11-28 05:18:53,938 | INFO     | ***************************************
[2025-11-27 21:19:29] 2025-11-28 05:18:54,440 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc514/slots/1
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | INFO     | sufficient remaining disk space (191460540416 B)
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | INFO     | update_server=False
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:19:29] 2025-11-28 05:18:54,468 | INFO     | aborting loop
[2025-11-27 21:19:29] 2025-11-28 05:18:54,683 | INFO     | all payload control threads have been joined
[2025-11-27 21:19:29] 2025-11-28 05:18:54,735 | INFO     | all job control threads have been joined
[2025-11-27 21:19:29] 2025-11-28 05:18:55,222 | INFO     | all data control threads have been joined
[2025-11-27 21:19:29] 2025-11-28 05:18:55,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:19:29] 2025-11-28 05:18:55,473 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:55,474 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:55,504 | INFO     | [job] validate thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:55,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:19:29] 2025-11-28 05:18:55,688 | INFO     | [payload] control thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:55,741 | INFO     | [job] control thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:55,903 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,227 | INFO     | [data] control thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,339 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,604 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,624 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,686 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:56,925 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:57,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:19:29] 2025-11-28 05:18:57,277 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:58,060 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:18:59,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:19:29] 2025-11-28 05:19:22,860 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:19:29] 2025-11-28 05:19:24,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137311082022720)>', '<ExcThread(monitor, started 137310725183232)>']
[2025-11-27 21:19:29] 2025-11-28 05:19:25,134 | INFO     | PID=3876839 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:19:29] 2025-11-28 05:19:25,134 | INFO     | .. there are 14 such processes running
[2025-11-27 21:19:29] 2025-11-28 05:19:25,134 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:19:29] 2025-11-28 05:19:25,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:19:29] 2025-11-28 05:19:25,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:19:29] 2025-11-28 05:19:25,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:19:29] 2025-11-28 05:19:25,135 | INFO     | [monitor] control thread has ended
[2025-11-27 21:19:29] 2025-11-28 05:19:29,037 | INFO     | all workflow threads have been joined
[2025-11-27 21:19:29] 2025-11-28 05:19:29,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:19:29] 2025-11-28 05:19:29,038 | INFO     | traces error code: 0
[2025-11-27 21:19:29] 2025-11-28 05:19:29,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:19:29] 2025-11-28 05:19:29,144 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:19:29] 2025-11-28 05:19:29,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:19:29] 2025-11-28 05:19:29,157 [wrapper] pilotpid: 3876839
[2025-11-27 21:19:29] 2025-11-28 05:19:29,158 [wrapper] Pilot exit status: 0
[2025-11-27 21:19:29] 2025-11-28 05:19:29,195 [wrapper] pandaids: 6896577809
[2025-11-27 21:19:29] 2025-11-28 05:19:29,243 [wrapper] cleanup supervisor_pilot 1028007 3876840
[2025-11-27 21:19:29] 2025-11-28 05:19:29,245 [wrapper] Test setup, not cleaning
[2025-11-27 21:19:29] 2025-11-28 05:19:29,247 [wrapper] apfmon messages muted
[2025-11-27 21:19:29] 2025-11-28 05:19:29,249 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:19:29] 2025-11-28 05:19:29,250 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:19:29]  *** Error codes and diagnostics ***
[2025-11-27 21:19:29]     "exeErrorCode": 0,
[2025-11-27 21:19:29]     "exeErrorDiag": "",
[2025-11-27 21:19:29]     "pilotErrorCode": 0,
[2025-11-27 21:19:29]     "pilotErrorDiag": "",
[2025-11-27 21:19:29]  *** Listing of results directory ***
[2025-11-27 21:19:29] total 1321848
[2025-11-27 21:19:29] -rw-r--r-- 1 root root    576529 Nov 24 21:12 pilot3.tar.gz
[2025-11-27 21:19:29] -rw-r--r-- 1 root root      5112 Nov 24 21:18 queuedata.json
[2025-11-27 21:19:29] -rwx------ 1 4871 1028     36292 Nov 24 21:22 runpilot2-wrapper.sh
[2025-11-27 21:19:29] -rw-r--r-- 1 root root       100 Nov 27 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:19:29] -rwxr-xr-x 1 root root      7986 Nov 27 04:41 run_atlas
[2025-11-27 21:19:29] -rw-r--r-- 1 root root       105 Nov 27 04:41 job.xml
[2025-11-27 21:19:29] -rw-r--r-- 2 root root 411108060 Nov 27 04:41 EVNT.47483658._002100.pool.root.1
[2025-11-27 21:19:29] -rw-r--r-- 1 root root      7071 Nov 27 04:41 init_data.xml
[2025-11-27 21:19:29] -rw-r--r-- 2 root root     15847 Nov 27 04:41 start_atlas.sh
[2025-11-27 21:19:29] drwxrwx--x 2 root root      4096 Nov 27 04:41 shared
[2025-11-27 21:19:29] -rw-r--r-- 2 root root    590102 Nov 27 04:41 input.tar.gz
[2025-11-27 21:19:29] -rw-r--r-- 1 root root         0 Nov 27 04:41 boinc_lockfile
[2025-11-27 21:19:29] -rw-r--r-- 1 root root      2784 Nov 27 04:41 pandaJob.out
[2025-11-27 21:19:29] -rw------- 1 root root    991566 Nov 27 04:41 agis_schedconf.cvmfs.json
[2025-11-27 21:19:29] drwxr-xr-x 5  320  320      4096 Nov 27 04:41 pilot3
[2025-11-27 21:19:29] -rw-r--r-- 1 root root       533 Nov 27 21:08 boinc_task_state.xml
[2025-11-27 21:19:29] -rw------- 1 root root 916837358 Nov 27 21:18 HITS.47556161._000839.pool.root.1
[2025-11-27 21:19:29] -rw------- 1 root root      1050 Nov 27 21:18 memory_monitor_summary.json
[2025-11-27 21:19:29] -rw------- 1 root root   1516240 Nov 27 21:18 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:19:29] -rw------- 1 root root   2351103 Nov 27 21:18 log.47556161._000839.job.log.tgz.1
[2025-11-27 21:19:29] -rw------- 1 root root      8599 Nov 27 21:18 heartbeat.json
[2025-11-27 21:19:29] -rw------- 1 root root        95 Nov 27 21:19 pilot_heartbeat.json
[2025-11-27 21:19:29] -rw-r--r-- 1 root root      8192 Nov 27 21:19 boinc_mmap_file
[2025-11-27 21:19:29] -rw-r--r-- 1 root root        29 Nov 27 21:19 wrapper_checkpoint.txt
[2025-11-27 21:19:29] -rw------- 1 root root      4839 Nov 27 21:19 pilotlog.txt
[2025-11-27 21:19:29] -rw------- 1 root root   8503217 Nov 27 21:19 log.47556161._000839.job.log.1
[2025-11-27 21:19:29] -rw------- 1 root root       353 Nov 27 21:19 output.list
[2025-11-27 21:19:29] -rw-r--r-- 1 root root       620 Nov 27 21:19 runtime_log
[2025-11-27 21:19:29] -rw------- 1 root root  10874880 Nov 27 21:19 result.tar.gz
[2025-11-27 21:19:29] -rw-r--r-- 1 root root      9021 Nov 27 21:19 runtime_log.err
[2025-11-27 21:19:29] -rw------- 1 root root       662 Nov 27 21:19 eGbKDmag0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBAMKDmXsmb5n.diag
[2025-11-27 21:19:29] -rw-r--r-- 1 root root     21478 Nov 27 21:19 stderr.txt
[2025-11-27 21:19:29] HITS file was successfully produced:
[2025-11-27 21:19:29] -rw------- 1 root root 916837358 Nov 27 21:18 shared/HITS.pool.root.1
[2025-11-27 21:19:29]  *** Contents of shared directory: ***
[2025-11-27 21:19:29] total 1308052
[2025-11-27 21:19:29] -rw-r--r-- 2 root root 411108060 Nov 27 04:41 ATLAS.root_0
[2025-11-27 21:19:29] -rw-r--r-- 2 root root     15847 Nov 27 04:41 start_atlas.sh
[2025-11-27 21:19:29] -rw-r--r-- 2 root root    590102 Nov 27 04:41 input.tar.gz
[2025-11-27 21:19:29] -rw------- 1 root root 916837358 Nov 27 21:18 HITS.pool.root.1
[2025-11-27 21:19:29] -rw------- 1 root root  10874880 Nov 27 21:19 result.tar.gz
21:19:30 (3872966): run_atlas exited; CPU time 133566.740677
21:19:30 (3872966): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN