Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:43:53 (11994): wrapper (7.7.26015): starting
19:43:53 (11994): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:43:53] Arguments: --nthreads 8
[2025-11-25 19:43:53] Threads: 8
[2025-11-25 19:43:53] Checking for CVMFS
[2025-11-25 19:43:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:43:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:43:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:43:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:43:53] 2.11.2.0 2781 70905 87096 153303 0 81 17144139 20275200 1 130560 0 20275420 99.872 3994484 33335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:43:53] CVMFS is ok
[2025-11-25 19:43:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:43:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:43:53] Further information can be found at the LHC@home message board.
[2025-11-25 19:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:43:53] Checking for apptainer binary...
[2025-11-25 19:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:43:53] Running /usr/bin/apptainer --version
[2025-11-25 19:43:53] apptainer version 1.3.2-1.el7
[2025-11-25 19:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:43:55] c-115-16.aglt2.org
[2025-11-25 19:43:55] apptainer works
[2025-11-25 19:43:55] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:43:55] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:43:55] Starting ATLAS job with PandaID=6893856231
[2025-11-25 19:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:01:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:01:46] 2025-11-26 12:01:10,316 | INFO     | monitor loop #2992: job 0:6893856231 is in state 'finished'
[2025-11-26 07:01:46] 2025-11-26 12:01:10,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:01:46] 2025-11-26 12:01:10,524 | INFO     | time since job start (40618s) is within the limit (172800.0s)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,487 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:01:46] 2025-11-26 12:01:12,490 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 07:01:46] 2025-11-26 12:01:12,492 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893856231/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,493 | INFO     | extracted standard info from prmon json
[2025-11-26 07:01:46] 2025-11-26 12:01:12,493 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:01:46] 2025-11-26 12:01:12,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:01:46] 2025-11-26 12:01:12,505 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:01:46] 2025-11-26 12:01:12,506 | INFO     | sum of square deviations: 91600893455.629
[2025-11-26 07:01:46] 2025-11-26 12:01:12,514 | INFO     | sum of deviations: 721114219561.6957
[2025-11-26 07:01:46] 2025-11-26 12:01:12,514 | INFO     | mean x: 1764138166.1186187
[2025-11-26 07:01:46] 2025-11-26 12:01:12,515 | INFO     | mean y: 3225496.927927928
[2025-11-26 07:01:46] 2025-11-26 12:01:12,515 | INFO     | intersect: -13884686169.303247
[2025-11-26 07:01:46] 2025-11-26 12:01:12,515 | INFO     | chi2: 5.749697492931793
[2025-11-26 07:01:46] 2025-11-26 12:01:12,516 | INFO     | sum of square deviations: 89553380721.20125
[2025-11-26 07:01:46] 2025-11-26 12:01:12,525 | INFO     | sum of deviations: 967021943696.7672
[2025-11-26 07:01:46] 2025-11-26 12:01:12,525 | INFO     | mean x: 1764138013.623298
[2025-11-26 07:01:46] 2025-11-26 12:01:12,525 | INFO     | mean y: 3243800.015128593
[2025-11-26 07:01:46] 2025-11-26 12:01:12,525 | INFO     | intersect: -19046401865.44973
[2025-11-26 07:01:46] 2025-11-26 12:01:12,526 | INFO     | chi2: 2.653518267404366
[2025-11-26 07:01:46] 2025-11-26 12:01:12,526 | INFO     | current chi2=2.653518267404366 (change=53.84942824093992 %)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,527 | INFO     | sum of square deviations: 87536532473.75
[2025-11-26 07:01:46] 2025-11-26 12:01:12,534 | INFO     | time since job start (40620s) is within the limit (172800.0s)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,535 | INFO     | sum of deviations: 984105813208.7491
[2025-11-26 07:01:46] 2025-11-26 12:01:12,535 | INFO     | mean x: 1764137861.125
[2025-11-26 07:01:46] 2025-11-26 12:01:12,535 | INFO     | mean y: 3245083.576219512
[2025-11-26 07:01:46] 2025-11-26 12:01:12,536 | INFO     | intersect: -19829598134.829464
[2025-11-26 07:01:46] 2025-11-26 12:01:12,536 | INFO     | chi2: 2.5658892593027915
[2025-11-26 07:01:46] 2025-11-26 12:01:12,536 | INFO     | current chi2=2.5658892593027915 (change=3.302370636675199 %)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,536 | INFO     | right removable region: 655
[2025-11-26 07:01:46] 2025-11-26 12:01:12,537 | INFO     | sum of square deviations: 89553129401.20123
[2025-11-26 07:01:46] 2025-11-26 12:01:12,545 | INFO     | sum of deviations: 510370694919.5738
[2025-11-26 07:01:46] 2025-11-26 12:01:12,546 | INFO     | mean x: 1764138318.623298
[2025-11-26 07:01:46] 2025-11-26 12:01:12,546 | INFO     | mean y: 3241162.2874432676
[2025-11-26 07:01:46] 2025-11-26 12:01:12,546 | INFO     | intersect: -10050729096.823835
[2025-11-26 07:01:46] 2025-11-26 12:01:12,546 | INFO     | chi2: 3.323654685332515
[2025-11-26 07:01:46] 2025-11-26 12:01:12,547 | INFO     | current chi2=3.323654685332515 (change=42.19426866511945 %)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,547 | INFO     | sum of square deviations: 87536150308.49878
[2025-11-26 07:01:46] 2025-11-26 12:01:12,555 | INFO     | sum of deviations: 470440172086.3833
[2025-11-26 07:01:46] 2025-11-26 12:01:12,556 | INFO     | mean x: 1764138471.1265244
[2025-11-26 07:01:46] 2025-11-26 12:01:12,556 | INFO     | mean y: 3244179.7423780486
[2025-11-26 07:01:46] 2025-11-26 12:01:12,556 | INFO     | intersect: -9477657173.768427
[2025-11-26 07:01:46] 2025-11-26 12:01:12,556 | INFO     | chi2: 3.2891825618431683
[2025-11-26 07:01:46] 2025-11-26 12:01:12,557 | INFO     | current chi2=3.2891825618431683 (change=1.0371752409019603 %)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,557 | INFO     | left removable region: 20
[2025-11-26 07:01:46] 2025-11-26 12:01:12,557 | INFO     | sum of square deviations: 79395825900.96677
[2025-11-26 07:01:46] 2025-11-26 12:01:12,565 | INFO     | sum of deviations: 685806939424.4911
[2025-11-26 07:01:46] 2025-11-26 12:01:12,565 | INFO     | mean x: 1764138440.6362205
[2025-11-26 07:01:46] 2025-11-26 12:01:12,565 | INFO     | mean y: 3267763.4047244093
[2025-11-26 07:01:46] 2025-11-26 12:01:12,565 | INFO     | intersect: -15235044464.783695
[2025-11-26 07:01:46] 2025-11-26 12:01:12,566 | INFO     | chi2: 0.06761435788278895
[2025-11-26 07:01:46] 2025-11-26 12:01:12,566 | INFO     | current memory leak: 8.64 B/s (using 635 data points, chi2=0.07)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | could have reported an average CPU frequency of 2417 MHz (26 samples)
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | ..............................
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | . Timing measurements:
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | . get job = 0 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | . initial setup = 2 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | . payload setup = 8 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,567 | INFO     | . stage-in = 0 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,568 | INFO     | . payload execution = 40580 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,568 | INFO     | . stage-out = 3 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,568 | INFO     | . log creation = 0 s
[2025-11-26 07:01:46] 2025-11-26 12:01:12,568 | INFO     | ..............................
[2025-11-26 07:01:46] 2025-11-26 12:01:13,029 | INFO     | 
[2025-11-26 07:01:46] 2025-11-26 12:01:13,029 | INFO     | job summary report
[2025-11-26 07:01:46] 2025-11-26 12:01:13,033 | INFO     | --------------------------------------------------
[2025-11-26 07:01:46] 2025-11-26 12:01:13,033 | INFO     | PanDA job id: 6893856231
[2025-11-26 07:01:46] 2025-11-26 12:01:13,033 | INFO     | task id: 47523449
[2025-11-26 07:01:46] 2025-11-26 12:01:13,033 | INFO     | errors: (none)
[2025-11-26 07:01:46] 2025-11-26 12:01:13,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | pilot state: finished 
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | transexitcode: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | exeerrorcode: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | exeerrordiag: 
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | exitcode: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | exitmsg: OK
[2025-11-26 07:01:46] 2025-11-26 12:01:13,034 | INFO     | cpuconsumptiontime: 316185 s
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | nevents: 1000
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | neventsw: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | pid: 23171
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | pgrp: 23171
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | corecount: 8
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | event service: False
[2025-11-26 07:01:46] 2025-11-26 12:01:13,035 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 11: 2284582, 40592: 2328456, 40596: 2337450, 40598: 2337634, 40604: 2337880}
[2025-11-26 07:01:46] 2025-11-26 12:01:13,036 | INFO     | --------------------------------------------------
[2025-11-26 07:01:46] 2025-11-26 12:01:13,036 | INFO     | 
[2025-11-26 07:01:46] 2025-11-26 12:01:13,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 07:01:46] 2025-11-26 12:01:13,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:01:46] 2025-11-26 12:01:13,069 | INFO     | job 6893856231 has completed (purged errors)
[2025-11-26 07:01:46] 2025-11-26 12:01:13,069 | INFO     | overall cleanup function is called
[2025-11-26 07:01:46] 2025-11-26 12:01:14,084 | INFO     | --- collectZombieJob: --- 10, [23171]
[2025-11-26 07:01:46] 2025-11-26 12:01:14,084 | INFO     | zombie collector waiting for pid 23171
[2025-11-26 07:01:46] 2025-11-26 12:01:14,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:01:46] 2025-11-26 12:01:14,084 | INFO     | collected zombie processes
[2025-11-26 07:01:46] 2025-11-26 12:01:14,085 | INFO     | will attempt to kill all subprocesses of pid=23171
[2025-11-26 07:01:46] 2025-11-26 12:01:14,170 | INFO     | process IDs to be killed: [23171] (in reverse order)
[2025-11-26 07:01:46] 2025-11-26 12:01:14,228 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:01:46] 2025-11-26 12:01:14,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:01:46] 2025-11-26 12:01:14,232 | INFO     | did not find any defunct processes belonging to 23171
[2025-11-26 07:01:46] 2025-11-26 12:01:14,236 | INFO     | did not find any defunct processes belonging to 23171
[2025-11-26 07:01:46] 2025-11-26 12:01:14,239 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:01:46] 2025-11-26 12:01:14,239 | INFO     | ready for new job
[2025-11-26 07:01:46] 2025-11-26 12:01:14,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:01:46] 2025-11-26 12:01:14,242 | INFO     | ***************************************
[2025-11-26 07:01:46] 2025-11-26 12:01:14,242 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:01:46] 2025-11-26 12:01:14,242 | INFO     | ***************************************
[2025-11-26 07:01:46] 2025-11-26 12:01:14,242 | INFO     | 
[2025-11-26 07:01:46] 2025-11-26 12:01:14,243 | INFO     | architecture information:
[2025-11-26 07:01:46] 2025-11-26 12:01:14,243 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:01:46] 2025-11-26 12:01:14,260 | INFO     | cat /etc/os-release:
[2025-11-26 07:01:46] NAME="CentOS Linux"
[2025-11-26 07:01:46] VERSION="7 (Core)"
[2025-11-26 07:01:46] ID="centos"
[2025-11-26 07:01:46] ID_LIKE="rhel fedora"
[2025-11-26 07:01:46] VERSION_ID="7"
[2025-11-26 07:01:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:01:46] ANSI_COLOR="0;31"
[2025-11-26 07:01:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:01:46] HOME_URL="https://www.centos.org/"
[2025-11-26 07:01:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:01:46] 
[2025-11-26 07:01:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:01:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:01:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:01:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:01:46] 
[2025-11-26 07:01:46] 2025-11-26 12:01:14,261 | INFO     | ***************************************
[2025-11-26 07:01:46] 2025-11-26 12:01:14,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 07:01:46] 2025-11-26 12:01:14,782 | INFO     | sufficient remaining disk space (17460887552 B)
[2025-11-26 07:01:46] 2025-11-26 12:01:14,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:01:46] 2025-11-26 12:01:14,783 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:01:46] 2025-11-26 12:01:14,783 | INFO     | update_server=False
[2025-11-26 07:01:46] 2025-11-26 12:01:14,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:01:46] 2025-11-26 12:01:14,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:01:46] 2025-11-26 12:01:14,784 | INFO     | aborting loop
[2025-11-26 07:01:46] 2025-11-26 12:01:15,203 | INFO     | all payload control threads have been joined
[2025-11-26 07:01:46] 2025-11-26 12:01:15,582 | INFO     | all data control threads have been joined
[2025-11-26 07:01:46] 2025-11-26 12:01:15,785 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:15,789 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:15,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:01:46] 2025-11-26 12:01:15,944 | INFO     | all job control threads have been joined
[2025-11-26 07:01:46] 2025-11-26 12:01:16,208 | INFO     | [payload] control thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,287 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,305 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,357 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,377 | INFO     | [job] validate thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,442 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,494 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,584 | INFO     | [data] control thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:01:46] 2025-11-26 12:01:16,950 | INFO     | [job] control thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:16,991 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:17,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:17,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:01:46] 2025-11-26 12:01:17,828 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:18,661 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:18,703 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:01:46] 2025-11-26 12:01:20,919 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:01:46] 2025-11-26 12:01:21,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865181329216)>', '<ExcThread(monitor, started 139863856768768)>']
[2025-11-26 07:01:46] 2025-11-26 12:01:26,515 | INFO     | all workflow threads have been joined
[2025-11-26 07:01:46] 2025-11-26 12:01:26,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:01:46] 2025-11-26 12:01:26,516 | INFO     | traces error code: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:26,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:01:46] 2025-11-26 12:01:45,742 | INFO     | PID=16787 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:01:46] 2025-11-26 12:01:45,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:01:46] 2025-11-26 12:01:45,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:01:46] 2025-11-26 12:01:45,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:01:46] 2025-11-26 12:01:45,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:01:46] 2025-11-26 12:01:45,743 | INFO     | [monitor] control thread has ended
[2025-11-26 07:01:46] 2025-11-26 12:01:45,838 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:01:46] 2025-11-26 12:01:45,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:01:46] 2025-11-26 12:01:45,847 [wrapper] pilotpid: 16787
[2025-11-26 07:01:46] 2025-11-26 12:01:45,852 [wrapper] Pilot exit status: 0
[2025-11-26 07:01:46] 2025-11-26 12:01:45,869 [wrapper] pandaids: 6893856231
[2025-11-26 07:01:46] 2025-11-26 12:01:45,912 [wrapper] cleanup supervisor_pilot  5595 16788
[2025-11-26 07:01:46] 2025-11-26 12:01:45,917 [wrapper] Test setup, not cleaning
[2025-11-26 07:01:46] 2025-11-26 12:01:45,922 [wrapper] apfmon messages muted
[2025-11-26 07:01:46] 2025-11-26 12:01:45,927 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:01:46] 2025-11-26 12:01:45,931 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:01:46]  *** Error codes and diagnostics ***
[2025-11-26 07:01:46]     "exeErrorCode": 0,
[2025-11-26 07:01:46]     "exeErrorDiag": "",
[2025-11-26 07:01:46]     "pilotErrorCode": 0,
[2025-11-26 07:01:46]     "pilotErrorDiag": "",
[2025-11-26 07:01:46]  *** Listing of results directory ***
[2025-11-26 07:01:46] total 1322148
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 07:45 queuedata.json
[2025-11-26 07:01:46] -rwx------ 1 boincer umatlas     36292 Nov 20 07:45 runpilot2-wrapper.sh
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas       100 Nov 25 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:01:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 19:43 run_atlas
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas       105 Nov 25 19:43 job.xml
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas 409048826 Nov 25 19:43 EVNT.47493127._000457.pool.root.1
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:43 start_atlas.sh
[2025-11-26 07:01:46] drwxrwx--x 2 boincer umatlas      4096 Nov 25 19:43 shared
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 19:43 input.tar.gz
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas         0 Nov 25 19:43 boinc_lockfile
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 19:43 pandaJob.out
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas        57 Nov 25 19:43 setup.sh.local
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas    991877 Nov 25 19:44 agis_schedconf.cvmfs.json
[2025-11-26 07:01:46] drwx------ 5 boincer umatlas      4096 Nov 25 19:44 pilot3
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas       533 Nov 26 06:53 boinc_task_state.xml
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas      5912 Nov 26 06:58 init_data.xml
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas 925836614 Nov 26 07:00 HITS.47523449._004570.pool.root.1
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas      1064 Nov 26 07:00 memory_monitor_summary.json
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas   1516240 Nov 26 07:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas   1935788 Nov 26 07:01 log.47523449._004570.job.log.tgz.1
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas      8658 Nov 26 07:01 heartbeat.json
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:01 boinc_mmap_file
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:01 wrapper_checkpoint.txt
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas       745 Nov 26 07:01 pilotlog.txt
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas        95 Nov 26 07:01 pilot_heartbeat.json
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas   5603373 Nov 26 07:01 log.47523449._004570.job.log.1
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas       353 Nov 26 07:01 output.list
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:01 runtime_log
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas   7557120 Nov 26 07:01 result.tar.gz
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 07:01 runtime_log.err
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas       668 Nov 26 07:01 oU4KDmfDJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlpHKDmEXLZVo.diag
[2025-11-26 07:01:46] -rw-r--r-- 1 boincer umatlas     21301 Nov 26 07:01 stderr.txt
[2025-11-26 07:01:46] HITS file was successfully produced:
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas 925836614 Nov 26 07:00 shared/HITS.pool.root.1
[2025-11-26 07:01:46]  *** Contents of shared directory: ***
[2025-11-26 07:01:46] total 1311584
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas 409048826 Nov 25 19:43 ATLAS.root_0
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:43 start_atlas.sh
[2025-11-26 07:01:46] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 19:43 input.tar.gz
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas 925836614 Nov 26 07:00 HITS.pool.root.1
[2025-11-26 07:01:46] -rw------- 1 boincer umatlas   7557120 Nov 26 07:01 result.tar.gz
07:01:47 (11994): run_atlas exited; CPU time 314156.303316
07:01:47 (11994): called boinc_finish(0)

</stderr_txt>
]]>

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