Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:34:11 (2477229): wrapper (7.7.26015): starting
01:34:11 (2477229): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 01:34:11] Arguments: --nthreads 3
[2025-11-26 01:34:11] Threads: 3
[2025-11-26 01:34:11] Checking for CVMFS
[2025-11-26 01:34:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:34:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:34:12] 2.9.2.0 2184780 63 59380 153303 0 88 35478779 36864000 0 130560 0 876381 100.000 1301 10932 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 01:34:12] CVMFS is ok
[2025-11-26 01:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:34:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:34:12] Further information can be found at the LHC@home message board.
[2025-11-26 01:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:34:12] Checking for apptainer binary...
[2025-11-26 01:34:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:34:12] Running /usr/bin/apptainer --version
[2025-11-26 01:34:12] apptainer version 1.4.1-1.1
[2025-11-26 01:34:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:34:12] thA335
[2025-11-26 01:34:12] apptainer works
[2025-11-26 01:34:12] Set ATHENA_PROC_NUMBER=3
[2025-11-26 01:34:12] Set ATHENA_CORE_NUMBER=3
[2025-11-26 01:34:12] Starting ATLAS job with PandaID=6896577467
[2025-11-26 01:34:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:38:32]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:38:32] 2025-11-26 00:37:43,070 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:38:32] 2025-11-26 00:37:43,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:38:32] 2025-11-26 00:37:43,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:38:32] 2025-11-26 00:37:43,250 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 01:38:32] 2025-11-26 00:37:43,250 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 01:38:32] 2025-11-26 00:37:43,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:38:32] 2025-11-26 00:37:43,251 | INFO     | will abort loop
[2025-11-26 01:38:32] 2025-11-26 00:37:43,436 | INFO     | all job control threads have been joined
[2025-11-26 01:38:32] 2025-11-26 00:37:44,074 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,075 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,153 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,171 | INFO     | all payload control threads have been joined
[2025-11-26 01:38:32] 2025-11-26 00:37:44,171 | INFO     | all data control threads have been joined
[2025-11-26 01:38:32] 2025-11-26 00:37:44,257 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,443 | INFO     | [job] control thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,596 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:44,971 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,075 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,130 | INFO     | [job] validate thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,176 | INFO     | [payload] control thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,177 | INFO     | [data] control thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,196 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,259 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:45,523 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:37:47,076 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:38:32] 2025-11-26 00:38:25,468 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:38:32] 2025-11-26 00:38:26,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782109521728)>', '<ExcThread(monitor, started 139781254149888)>']
[2025-11-26 01:38:32] 2025-11-26 00:38:27,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:38:32] 2025-11-26 00:38:27,304 | INFO     | [monitor] control thread has ended
[2025-11-26 01:38:32] 2025-11-26 00:38:32,019 | INFO     | all workflow threads have been joined
[2025-11-26 01:38:32] 2025-11-26 00:38:32,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:38:32] 2025-11-26 00:38:32,021 | INFO     | traces error code: 0
[2025-11-26 01:38:32] 2025-11-26 00:38:32,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:38:32] 2025-11-26 00:38:32,065 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:38:32] 2025-11-26 00:38:32,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:38:32] 2025-11-26 00:38:32,071 [wrapper] pilotpid: 2480962
[2025-11-26 01:38:32] 2025-11-26 00:38:32,074 [wrapper] Pilot exit status: 0
[2025-11-26 01:38:32] 2025-11-26 00:38:32,081 [wrapper] pandaids: 6896577467
[2025-11-26 01:38:32] 2025-11-26 00:38:32,097 [wrapper] cleanup supervisor_pilot 2480968 2480963
[2025-11-26 01:38:32] 2025-11-26 00:38:32,099 [wrapper] Test setup, not cleaning
[2025-11-26 01:38:32] 2025-11-26 00:38:32,102 [wrapper] apfmon messages muted
[2025-11-26 01:38:32] 2025-11-26 00:38:32,104 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:38:32] 2025-11-26 00:38:32,107 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:38:32]  *** Error codes and diagnostics ***
[2025-11-26 01:38:32]     "exeErrorCode": 65,
[2025-11-26 01:38:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:38:32]     "pilotErrorCode": 1305,
[2025-11-26 01:38:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:38:32]  *** Listing of results directory ***
[2025-11-26 01:38:32] total 405464
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc    576529 Nov 25 05:09 pilot3.tar.gz
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      5112 Nov 25 06:05 queuedata.json
[2025-11-26 01:38:32] -rwx------ 1 boinc boinc     36292 Nov 25 06:07 runpilot2-wrapper.sh
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:38:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:34 run_atlas
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:34 job.xml
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc 410999430 Nov 26 01:34 EVNT.47483658._002089.pool.root.1
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc    590102 Nov 26 01:34 input.tar.gz
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:34 start_atlas.sh
[2025-11-26 01:38:32] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:34 shared
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:34 boinc_setup_complete
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      6196 Nov 26 01:34 init_data.xml
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:34 boinc_lockfile
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      2783 Nov 26 01:34 pandaJob.out
[2025-11-26 01:38:32] -rw------- 1 boinc boinc    991877 Nov 26 01:34 agis_schedconf.cvmfs.json
[2025-11-26 01:38:32] -rw------- 1 boinc boinc   1516240 Nov 26 01:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:38:32] drwx------ 5 boinc boinc      4096 Nov 26 01:34 pilot3
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc       523 Nov 26 01:35 boinc_task_state.xml
[2025-11-26 01:38:32] -rw------- 1 boinc boinc       954 Nov 26 01:35 memory_monitor_summary.json
[2025-11-26 01:38:32] -rw------- 1 boinc boinc     55738 Nov 26 01:35 log.47556161._000723.job.log.tgz.1
[2025-11-26 01:38:32] -rw------- 1 boinc boinc        95 Nov 26 01:37 pilot_heartbeat.json
[2025-11-26 01:38:32] -rw------- 1 boinc boinc      8400 Nov 26 01:37 heartbeat.json
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      8192 Nov 26 01:38 boinc_mmap_file
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc        23 Nov 26 01:38 wrapper_checkpoint.txt
[2025-11-26 01:38:32] -rw------- 1 boinc boinc      4742 Nov 26 01:38 pilotlog.txt
[2025-11-26 01:38:32] -rw------- 1 boinc boinc     93869 Nov 26 01:38 log.47556161._000723.job.log.1
[2025-11-26 01:38:32] -rw------- 1 boinc boinc       186 Nov 26 01:38 output.list
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc       620 Nov 26 01:38 runtime_log
[2025-11-26 01:38:32] -rw------- 1 boinc boinc    174080 Nov 26 01:38 result.tar.gz
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      8744 Nov 26 01:38 runtime_log.err
[2025-11-26 01:38:32] -rw------- 1 boinc boinc       649 Nov 26 01:38 X0pLDmgR0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDme8LKDmbbtohn.diag
[2025-11-26 01:38:32] -rw-r--r-- 1 boinc boinc      7184 Nov 26 01:38 stderr.txt
[2025-11-26 01:38:32] No HITS result produced
[2025-11-26 01:38:32]  *** Contents of shared directory: ***
[2025-11-26 01:38:32] total 402136
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc 410999430 Nov 26 01:34 ATLAS.root_0
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc    590102 Nov 26 01:34 input.tar.gz
[2025-11-26 01:38:32] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:34 start_atlas.sh
[2025-11-26 01:38:32] -rw------- 1 boinc boinc    174080 Nov 26 01:38 result.tar.gz
01:38:34 (2477229): run_atlas exited; CPU time 31.694814
01:38:34 (2477229): called boinc_finish(0)

</stderr_txt>
]]>

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