Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:28:37 (3316603): wrapper (7.7.26015): starting
19:28:37 (3316603): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:28:37] Arguments: --nthreads 8
[2025-11-25 19:28:37] Threads: 8
[2025-11-25 19:28:37] Checking for CVMFS
[2025-11-25 19:28:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:28:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:28:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:28:39] 2.13.2.0 5795 32190 167280 153303 2 162 35061820 39288832 8853 16776704 0 23091475 99.579 21886251 36540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:28:39] CVMFS is ok
[2025-11-25 19:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:28:39] Further information can be found at the LHC@home message board.
[2025-11-25 19:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:28:39] Checking for apptainer binary...
[2025-11-25 19:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:28:39] Running /usr/bin/apptainer --version
[2025-11-25 19:28:39] apptainer version 1.4.4-1.el9
[2025-11-25 19:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:28:39] c-210-14.aglt2.org
[2025-11-25 19:28:39] apptainer works
[2025-11-25 19:28:39] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:28:39] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:28:39] Starting ATLAS job with PandaID=6892526586
[2025-11-25 19:28:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:49:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:49:53] 2025-11-27 01:48:57,578 | INFO     | time since job start (91195s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:48:59,585 | INFO     | time since job start (91197s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:48:59,696 | INFO     | monitor loop #5839: job 0:6892526586 is in state 'finished'
[2025-11-26 20:49:53] 2025-11-27 01:48:59,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:49:53] 2025-11-27 01:49:01,592 | INFO     | time since job start (91199s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:49:02,203 | INFO     | monitor loop #5840: job 0:6892526586 is in state 'finished'
[2025-11-26 20:49:53] 2025-11-27 01:49:02,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:49:53] 2025-11-27 01:49:03,599 | INFO     | time since job start (91201s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:49:04,740 | INFO     | monitor loop #5841: job 0:6892526586 is in state 'finished'
[2025-11-26 20:49:53] 2025-11-27 01:49:04,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:49:53] 2025-11-27 01:49:05,606 | INFO     | time since job start (91203s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:49:07,303 | INFO     | monitor loop #5842: job 0:6892526586 is in state 'finished'
[2025-11-26 20:49:53] 2025-11-27 01:49:07,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:49:53] 2025-11-27 01:49:07,613 | INFO     | time since job start (91205s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:49:09,685 | INFO     | time since job start (91207s) is within the limit (172800.0s)
[2025-11-26 20:49:53] 2025-11-27 01:49:09,861 | INFO     | monitor loop #5843: job 0:6892526586 is in state 'finished'
[2025-11-26 20:49:53] 2025-11-27 01:49:09,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:49:53] 2025-11-27 01:49:10,269 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 20:49:53] 2025-11-27 01:49:10,283 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2550.1743250000004
[2025-11-26 20:49:53] 2025-11-27 01:49:10,318 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6892526586/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:49:53] 2025-11-27 01:49:10,319 | INFO     | extracted standard info from prmon json
[2025-11-26 20:49:53] 2025-11-27 01:49:10,319 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:49:53] 2025-11-27 01:49:10,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:49:53] 2025-11-27 01:49:10,426 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:49:53] 2025-11-27 01:49:10,428 | INFO     | sum of square deviations: 1034020513330.0592
[2025-11-26 20:49:53] 2025-11-27 01:49:10,595 | INFO     | sum of deviations: 1542851298651.313
[2025-11-26 20:49:53] 2025-11-27 01:49:10,596 | INFO     | mean x: 1764162522.856091
[2025-11-26 20:49:53] 2025-11-27 01:49:10,596 | INFO     | mean y: 2923030.2851405623
[2025-11-26 20:49:53] 2025-11-27 01:49:10,596 | INFO     | intersect: -2629365598.742943
[2025-11-26 20:49:53] 2025-11-27 01:49:10,598 | INFO     | chi2: 26.690725922932586
[2025-11-26 20:49:53] 2025-11-27 01:49:10,604 | INFO     | sum of square deviations: 1023674446198.4373
[2025-11-26 20:49:53] 2025-11-27 01:49:10,763 | INFO     | sum of deviations: 2041858775006.446
[2025-11-26 20:49:53] 2025-11-27 01:49:10,763 | INFO     | mean x: 1764162370.363331
[2025-11-26 20:49:53] 2025-11-27 01:49:10,764 | INFO     | mean y: 2930383.9677636
[2025-11-26 20:49:53] 2025-11-27 01:49:10,764 | INFO     | intersect: -3515932893.160741
[2025-11-26 20:49:53] 2025-11-27 01:49:10,772 | INFO     | chi2: 23.377789241338647
[2025-11-26 20:49:53] 2025-11-27 01:49:10,772 | INFO     | current chi2=23.377789241338647 (change=12.412313891948044 %)
[2025-11-26 20:49:53] 2025-11-27 01:49:10,772 | INFO     | right removable region: 1488
[2025-11-26 20:49:53] 2025-11-27 01:49:10,774 | INFO     | sum of square deviations: 1023672389884.7119
[2025-11-26 20:49:53] 2025-11-27 01:49:10,912 | INFO     | sum of deviations: 1131921905091.9375
[2025-11-26 20:49:53] 2025-11-27 01:49:10,912 | INFO     | mean x: 1764162675.3640027
[2025-11-26 20:49:53] 2025-11-27 01:49:10,913 | INFO     | mean y: 2929081.110812626
[2025-11-26 20:49:53] 2025-11-27 01:49:10,913 | INFO     | intersect: -1947787179.4058998
[2025-11-26 20:49:53] 2025-11-27 01:49:10,923 | INFO     | chi2: 24.53647217692674
[2025-11-26 20:49:53] 2025-11-27 01:49:10,923 | INFO     | current chi2=24.53647217692674 (change=8.071169559891656 %)
[2025-11-26 20:49:53] 2025-11-27 01:49:10,923 | INFO     | left removable region: 10
[2025-11-26 20:49:53] 2025-11-27 01:49:10,925 | INFO     | sum of square deviations: 1001153276377.844
[2025-11-26 20:49:53] 2025-11-27 01:49:11,149 | INFO     | sum of deviations: 1629887766017.9316
[2025-11-26 20:49:53] 2025-11-27 01:49:11,149 | INFO     | mean x: 1764162644.874831
[2025-11-26 20:49:53] 2025-11-27 01:49:11,150 | INFO     | mean y: 2939250.696887686
[2025-11-26 20:49:53] 2025-11-27 01:49:11,150 | INFO     | intersect: -2869135565.4096203
[2025-11-26 20:49:53] 2025-11-27 01:49:11,156 | INFO     | chi2: 20.599018790957423
[2025-11-26 20:49:53] 2025-11-27 01:49:11,156 | INFO     | current memory leak: 1.63 B/s (using 1478 data points, chi2=20.60)
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | could have reported an average CPU frequency of 2592 MHz (53 samples)
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | ..............................
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | . Timing measurements:
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | . get job = 0 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | . initial setup = 3 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | . payload setup = 11 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,158 | INFO     | . stage-in = 0 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,163 | INFO     | . payload execution = 91116 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,163 | INFO     | . stage-out = 9 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,163 | INFO     | . log creation = 3 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,163 | INFO     | ..............................
[2025-11-26 20:49:53] 2025-11-27 01:49:11,568 | INFO     | 
[2025-11-26 20:49:53] 2025-11-27 01:49:11,568 | INFO     | job summary report
[2025-11-26 20:49:53] 2025-11-27 01:49:11,568 | INFO     | --------------------------------------------------
[2025-11-26 20:49:53] 2025-11-27 01:49:11,568 | INFO     | PanDA job id: 6892526586
[2025-11-26 20:49:53] 2025-11-27 01:49:11,568 | INFO     | task id: 47493029
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | errors: (none)
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | pilot state: finished 
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | transexitcode: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | exeerrorcode: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | exeerrordiag: 
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | exitcode: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:11,569 | INFO     | exitmsg: OK
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | cpuconsumptiontime: 303592 s
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | nevents: 1000
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | neventsw: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | pid: 3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | pgrp: 3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | corecount: 8
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | event service: False
[2025-11-26 20:49:53] 2025-11-27 01:49:11,570 | INFO     | sizes: {0: 2284304, 1: 2284332, 10: 2284594, 12: 2284622, 91132: 2353193, 91142: 2362371, 91188: 2362657}
[2025-11-26 20:49:53] 2025-11-27 01:49:11,571 | INFO     | --------------------------------------------------
[2025-11-26 20:49:53] 2025-11-27 01:49:11,571 | INFO     | 
[2025-11-26 20:49:53] 2025-11-27 01:49:11,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 20:49:53] 2025-11-27 01:49:11,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | job 6892526586 has completed (purged errors)
[2025-11-26 20:49:53] 2025-11-27 01:49:11,628 | INFO     | overall cleanup function is called
[2025-11-26 20:49:53] 2025-11-27 01:49:12,693 | INFO     | --- collectZombieJob: --- 10, [3328590]
[2025-11-26 20:49:53] 2025-11-27 01:49:12,693 | INFO     | zombie collector waiting for pid 3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:12,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:49:53] 2025-11-27 01:49:12,693 | INFO     | collected zombie processes
[2025-11-26 20:49:53] 2025-11-27 01:49:12,693 | INFO     | will attempt to kill all subprocesses of pid=3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:13,852 | INFO     | process IDs to be killed: [3328590] (in reverse order)
[2025-11-26 20:49:53] 2025-11-27 01:49:14,181 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:49:53] 2025-11-27 01:49:14,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:49:53] 2025-11-27 01:49:14,199 | INFO     | did not find any defunct processes belonging to 3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:14,226 | INFO     | did not find any defunct processes belonging to 3328590
[2025-11-26 20:49:53] 2025-11-27 01:49:14,228 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:49:53] 2025-11-27 01:49:14,228 | INFO     | ready for new job
[2025-11-26 20:49:53] 2025-11-27 01:49:14,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:49:53] 2025-11-27 01:49:14,239 | INFO     | ***************************************
[2025-11-26 20:49:53] 2025-11-27 01:49:14,245 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:49:53] 2025-11-27 01:49:14,245 | INFO     | ***************************************
[2025-11-26 20:49:53] 2025-11-27 01:49:14,245 | INFO     | 
[2025-11-26 20:49:53] 2025-11-27 01:49:14,247 | INFO     | architecture information:
[2025-11-26 20:49:53] 2025-11-27 01:49:14,251 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:49:53] 2025-11-27 01:49:14,282 | INFO     | cat /etc/os-release:
[2025-11-26 20:49:53] NAME="CentOS Linux"
[2025-11-26 20:49:53] VERSION="7 (Core)"
[2025-11-26 20:49:53] ID="centos"
[2025-11-26 20:49:53] ID_LIKE="rhel fedora"
[2025-11-26 20:49:53] VERSION_ID="7"
[2025-11-26 20:49:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:49:53] ANSI_COLOR="0;31"
[2025-11-26 20:49:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:49:53] HOME_URL="https://www.centos.org/"
[2025-11-26 20:49:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:49:53] 
[2025-11-26 20:49:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:49:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:49:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:49:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:49:53] 
[2025-11-26 20:49:53] 2025-11-27 01:49:14,282 | INFO     | ***************************************
[2025-11-26 20:49:53] 2025-11-27 01:49:14,786 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 20:49:53] 2025-11-27 01:49:14,984 | INFO     | sufficient remaining disk space (48050995200 B)
[2025-11-26 20:49:53] 2025-11-27 01:49:14,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:49:53] 2025-11-27 01:49:14,985 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:49:53] 2025-11-27 01:49:14,985 | INFO     | update_server=False
[2025-11-26 20:49:53] 2025-11-27 01:49:14,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:49:53] 2025-11-27 01:49:15,014 | INFO     | all payload control threads have been joined
[2025-11-26 20:49:53] 2025-11-27 01:49:15,580 | INFO     | all data control threads have been joined
[2025-11-26 20:49:53] 2025-11-27 01:49:15,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:49:53] 2025-11-27 01:49:15,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:49:53] 2025-11-27 01:49:15,973 | INFO     | aborting loop
[2025-11-26 20:49:53] 2025-11-27 01:49:15,993 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,020 | INFO     | [payload] control thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,344 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,391 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,527 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:49:53] 2025-11-27 01:49:16,579 | INFO     | all job control threads have been joined
[2025-11-26 20:49:53] 2025-11-27 01:49:16,586 | INFO     | [data] control thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,621 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:49:53] 2025-11-27 01:49:16,877 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:16,979 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,272 | INFO     | [job] validate thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,414 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,454 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,585 | INFO     | [job] control thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,665 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:17,883 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:20,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:49:53] 2025-11-27 01:49:43,312 | INFO     | PID=3321921 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:49:53] 2025-11-27 01:49:43,312 | INFO     | .. there are 9 such processes running
[2025-11-26 20:49:53] 2025-11-27 01:49:43,313 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:49:53] 2025-11-27 01:49:43,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:49:53] 2025-11-27 01:49:43,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:49:53] 2025-11-27 01:49:44,477 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:49:53] 2025-11-27 01:49:44,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216516527936)>', '<ExcThread(monitor, started 140216027301632)>']
[2025-11-26 20:49:53] 2025-11-27 01:49:45,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:49:53] 2025-11-27 01:49:45,327 | INFO     | [monitor] control thread has ended
[2025-11-26 20:49:53] 2025-11-27 01:49:49,992 | INFO     | all workflow threads have been joined
[2025-11-26 20:49:53] 2025-11-27 01:49:49,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:49:53] 2025-11-27 01:49:49,992 | INFO     | traces error code: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:49,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:49:53] 2025-11-27 01:49:50,873 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:49:53] 2025-11-27 01:49:50,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:49:53] 2025-11-27 01:49:50,963 [wrapper] pilotpid: 3321921
[2025-11-26 20:49:53] 2025-11-27 01:49:50,995 [wrapper] Pilot exit status: 0
[2025-11-26 20:49:53] 2025-11-27 01:49:51,130 [wrapper] pandaids: 6892526586
[2025-11-26 20:49:53] 2025-11-27 01:49:51,344 [wrapper] cleanup supervisor_pilot 1369856 3321922
[2025-11-26 20:49:53] 2025-11-27 01:49:51,409 [wrapper] Test setup, not cleaning
[2025-11-26 20:49:53] 2025-11-27 01:49:51,471 [wrapper] apfmon messages muted
[2025-11-26 20:49:53] 2025-11-27 01:49:51,549 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:49:53] 2025-11-27 01:49:51,596 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:49:53]  *** Error codes and diagnostics ***
[2025-11-26 20:49:53]     "exeErrorCode": 0,
[2025-11-26 20:49:53]     "exeErrorDiag": "",
[2025-11-26 20:49:53]     "pilotErrorCode": 0,
[2025-11-26 20:49:53]     "pilotErrorDiag": "",
[2025-11-26 20:49:53]  *** Listing of results directory ***
[2025-11-26 20:49:53] total 1334764
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:10 queuedata.json
[2025-11-26 20:49:53] -rwx------. 1 boincer umatlas     36292 Nov 19 02:10 runpilot2-wrapper.sh
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:49:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:28 run_atlas
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:28 job.xml
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas 413225320 Nov 25 19:28 EVNT.47493027._000110.pool.root.1
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 19:28 start_atlas.sh
[2025-11-26 20:49:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:28 shared
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas    590092 Nov 25 19:28 input.tar.gz
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:28 boinc_lockfile
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas      2773 Nov 25 19:28 pandaJob.out
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas    991877 Nov 25 19:28 agis_schedconf.cvmfs.json
[2025-11-26 20:49:53] drwx------. 5 boincer umatlas      4096 Nov 25 19:29 pilot3
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:02 boinc_task_state.xml
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas 920694556 Nov 26 20:46 HITS.47493029._001059.pool.root.1
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 20:47 init_data.xml
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas      1062 Nov 26 20:48 memory_monitor_summary.json
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas   2522487 Nov 26 20:48 log.47493029._001059.job.log.tgz.1
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas        95 Nov 26 20:48 pilot_heartbeat.json
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas      8627 Nov 26 20:49 heartbeat.json
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas      4823 Nov 26 20:49 pilotlog.txt
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas  11961731 Nov 26 20:49 log.47493029._001059.job.log.1
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:49 boinc_mmap_file
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:49 wrapper_checkpoint.txt
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas       353 Nov 26 20:49 output.list
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:49 runtime_log
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas  14499840 Nov 26 20:49 result.tar.gz
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas      8704 Nov 26 20:49 runtime_log.err
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas       661 Nov 26 20:49 9O9NDmsVrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmliGKDmd5wXgm.diag
[2025-11-26 20:49:53] -rw-r--r--. 1 boincer umatlas     21755 Nov 26 20:49 stderr.txt
[2025-11-26 20:49:53] HITS file was successfully produced:
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas 920694556 Nov 26 20:46 shared/HITS.pool.root.1
[2025-11-26 20:49:53]  *** Contents of shared directory: ***
[2025-11-26 20:49:53] total 1317420
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas 413225320 Nov 25 19:28 ATLAS.root_0
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 19:28 start_atlas.sh
[2025-11-26 20:49:53] -rw-r--r--. 2 boincer umatlas    590092 Nov 25 19:28 input.tar.gz
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas 920694556 Nov 26 20:46 HITS.pool.root.1
[2025-11-26 20:49:53] -rw-------. 1 boincer umatlas  14499840 Nov 26 20:49 result.tar.gz
20:50:15 (3316603): run_atlas exited; CPU time 305350.510194
20:50:15 (3316603): called boinc_finish(0)

</stderr_txt>
]]>

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