Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:18:56 (852175): wrapper (7.7.26015): starting
19:18:56 (852175): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:18:56] Arguments: --nthreads 8
[2025-11-25 19:18:56] Threads: 8
[2025-11-25 19:18:56] Checking for CVMFS
[2025-11-25 19:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:18:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:18:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:18:57] 2.13.3.0 11771 29275 229720 153303 2 308 23001446 32935937 38731 16776704 0 207177425 99.599 215615283 38486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:18:57] CVMFS is ok
[2025-11-25 19:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:18:57] Further information can be found at the LHC@home message board.
[2025-11-25 19:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:18:57] Checking for apptainer binary...
[2025-11-25 19:18:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:18:57] Running /usr/bin/apptainer --version
[2025-11-25 19:18:57] apptainer version 1.4.4-1.el9
[2025-11-25 19:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:18:57] c7-2-14.aglt2.org
[2025-11-25 19:18:57] apptainer works
[2025-11-25 19:18:57] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:18:57] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:18:57] Starting ATLAS job with PandaID=6896577500
[2025-11-25 19:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:16:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:16:46] 2025-11-26 13:16:05,839 | INFO     | monitor loop #2669: job 0:6896577500 is in state 'finished'
[2025-11-26 08:16:46] 2025-11-26 13:16:05,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:16:46] 2025-11-26 13:16:06,233 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3243.315885416667
[2025-11-26 08:16:46] 2025-11-26 13:16:06,247 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6896577500/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,248 | INFO     | extracted standard info from prmon json
[2025-11-26 08:16:46] 2025-11-26 13:16:06,248 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:16:46] 2025-11-26 13:16:06,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:16:46] 2025-11-26 13:16:06,258 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:16:46] 2025-11-26 13:16:06,259 | INFO     | sum of square deviations: 138286282351.17194
[2025-11-26 08:16:46] 2025-11-26 13:16:06,270 | INFO     | sum of deviations: 715859990783.1871
[2025-11-26 08:16:46] 2025-11-26 13:16:06,270 | INFO     | mean x: 1764139665.7225132
[2025-11-26 08:16:46] 2025-11-26 13:16:06,270 | INFO     | mean y: 2882801.651832461
[2025-11-26 08:16:46] 2025-11-26 13:16:06,270 | INFO     | intersect: -9129454718.546682
[2025-11-26 08:16:46] 2025-11-26 13:16:06,271 | INFO     | chi2: 8.08250705976079
[2025-11-26 08:16:46] 2025-11-26 13:16:06,272 | INFO     | sum of square deviations: 135589381758.651
[2025-11-26 08:16:46] 2025-11-26 13:16:06,281 | INFO     | sum of deviations: 995137999174.1206
[2025-11-26 08:16:46] 2025-11-26 13:16:06,282 | INFO     | mean x: 1764139513.2305665
[2025-11-26 08:16:46] 2025-11-26 13:16:06,282 | INFO     | mean y: 2898592.787878788
[2025-11-26 08:16:46] 2025-11-26 13:16:06,282 | INFO     | intersect: -12944739656.534422
[2025-11-26 08:16:46] 2025-11-26 13:16:06,282 | INFO     | chi2: 4.442064435913544
[2025-11-26 08:16:46] 2025-11-26 13:16:06,282 | INFO     | current chi2=4.442064435913544 (change=45.041007659261965 %)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,283 | INFO     | sum of square deviations: 132927691680.4788
[2025-11-26 08:16:46] 2025-11-26 13:16:06,293 | INFO     | sum of deviations: 1081784001360.9146
[2025-11-26 08:16:46] 2025-11-26 13:16:06,293 | INFO     | mean x: 1764139360.7360742
[2025-11-26 08:16:46] 2025-11-26 13:16:06,293 | INFO     | mean y: 2903534.9442970823
[2025-11-26 08:16:46] 2025-11-26 13:16:06,293 | INFO     | intersect: -14353907393.531475
[2025-11-26 08:16:46] 2025-11-26 13:16:06,294 | INFO     | chi2: 3.4278415942718006
[2025-11-26 08:16:46] 2025-11-26 13:16:06,294 | INFO     | current chi2=3.4278415942718006 (change=22.83224064563036 %)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,294 | INFO     | right removable region: 753
[2025-11-26 08:16:46] 2025-11-26 13:16:06,294 | INFO     | sum of square deviations: 135588812018.65099
[2025-11-26 08:16:46] 2025-11-26 13:16:06,304 | INFO     | sum of deviations: 454249810346.6328
[2025-11-26 08:16:46] 2025-11-26 13:16:06,304 | INFO     | mean x: 1764139818.2305665
[2025-11-26 08:16:46] 2025-11-26 13:16:06,304 | INFO     | mean y: 2897585.1106719365
[2025-11-26 08:16:46] 2025-11-26 13:16:06,304 | INFO     | intersect: -5907325875.99574
[2025-11-26 08:16:46] 2025-11-26 13:16:06,306 | INFO     | chi2: 5.060301066688778
[2025-11-26 08:16:46] 2025-11-26 13:16:06,306 | INFO     | current chi2=5.060301066688778 (change=37.39193756004535 %)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,307 | INFO     | sum of square deviations: 132926644673.5293
[2025-11-26 08:16:46] 2025-11-26 13:16:06,317 | INFO     | sum of deviations: 387749254539.9333
[2025-11-26 08:16:46] 2025-11-26 13:16:06,317 | INFO     | mean x: 1764139970.7387269
[2025-11-26 08:16:46] 2025-11-26 13:16:06,317 | INFO     | mean y: 2901386.6392572946
[2025-11-26 08:16:46] 2025-11-26 13:16:06,317 | INFO     | intersect: -5143124530.422501
[2025-11-26 08:16:46] 2025-11-26 13:16:06,318 | INFO     | chi2: 4.81669373263499
[2025-11-26 08:16:46] 2025-11-26 13:16:06,318 | INFO     | current chi2=4.81669373263499 (change=4.8140877557151605 %)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,318 | INFO     | left removable region: 20
[2025-11-26 08:16:46] 2025-11-26 13:16:06,319 | INFO     | sum of square deviations: 122127102750.75078
[2025-11-26 08:16:46] 2025-11-26 13:16:06,328 | INFO     | sum of deviations: 707395399838.9219
[2025-11-26 08:16:46] 2025-11-26 13:16:06,328 | INFO     | mean x: 1764139940.2592087
[2025-11-26 08:16:46] 2025-11-26 13:16:06,328 | INFO     | mean y: 2925131.900409277
[2025-11-26 08:16:46] 2025-11-26 13:16:06,328 | INFO     | intersect: -10215482169.207884
[2025-11-26 08:16:46] 2025-11-26 13:16:06,329 | INFO     | chi2: 0.09468621725946012
[2025-11-26 08:16:46] 2025-11-26 13:16:06,329 | INFO     | current memory leak: 5.79 B/s (using 733 data points, chi2=0.09)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,330 | INFO     | could have reported an average CPU frequency of 3240 MHz (29 samples)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,330 | INFO     | ..............................
[2025-11-26 08:16:46] 2025-11-26 13:16:06,330 | INFO     | . Timing measurements:
[2025-11-26 08:16:46] 2025-11-26 13:16:06,330 | INFO     | . get job = 0 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,330 | INFO     | . initial setup = 2 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | . payload setup = 9 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | . stage-in = 0 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | . payload execution = 46565 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | . stage-out = 3 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | . log creation = 0 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,331 | INFO     | ..............................
[2025-11-26 08:16:46] 2025-11-26 13:16:06,437 | INFO     | 
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | job summary report
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | --------------------------------------------------
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | PanDA job id: 6896577500
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | task id: 47556161
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | errors: (none)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | pilot state: finished 
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | transexitcode: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | exeerrorcode: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:06,445 | INFO     | exeerrordiag: 
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | exitcode: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | exitmsg: OK
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | cpuconsumptiontime: 193076 s
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | nevents: 1000
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | neventsw: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | pid: 874520
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | pgrp: 874520
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | corecount: 8
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | event service: False
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | sizes: {0: 2284091, 1: 2284290, 8: 2284552, 11: 2284580, 46576: 2331097, 46580: 2340091, 46582: 2340275, 46592: 2340521}
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | --------------------------------------------------
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | 
[2025-11-26 08:16:46] 2025-11-26 13:16:06,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 08:16:46] 2025-11-26 13:16:06,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | job 6896577500 has completed (purged errors)
[2025-11-26 08:16:46] 2025-11-26 13:16:06,522 | INFO     | overall cleanup function is called
[2025-11-26 08:16:46] 2025-11-26 13:16:07,541 | INFO     | --- collectZombieJob: --- 10, [874520]
[2025-11-26 08:16:46] 2025-11-26 13:16:07,541 | INFO     | zombie collector waiting for pid 874520
[2025-11-26 08:16:46] 2025-11-26 13:16:07,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:16:46] 2025-11-26 13:16:07,541 | INFO     | collected zombie processes
[2025-11-26 08:16:46] 2025-11-26 13:16:07,541 | INFO     | will attempt to kill all subprocesses of pid=874520
[2025-11-26 08:16:46] 2025-11-26 13:16:08,523 | INFO     | process IDs to be killed: [874520] (in reverse order)
[2025-11-26 08:16:46] 2025-11-26 13:16:08,744 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:16:46] 2025-11-26 13:16:08,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:16:46] 2025-11-26 13:16:08,783 | INFO     | did not find any defunct processes belonging to 874520
[2025-11-26 08:16:46] 2025-11-26 13:16:08,810 | INFO     | did not find any defunct processes belonging to 874520
[2025-11-26 08:16:46] 2025-11-26 13:16:08,812 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:16:46] 2025-11-26 13:16:08,812 | INFO     | ready for new job
[2025-11-26 08:16:46] 2025-11-26 13:16:08,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:16:46] 2025-11-26 13:16:08,817 | INFO     | ***************************************
[2025-11-26 08:16:46] 2025-11-26 13:16:08,817 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:16:46] 2025-11-26 13:16:08,817 | INFO     | ***************************************
[2025-11-26 08:16:46] 2025-11-26 13:16:08,817 | INFO     | 
[2025-11-26 08:16:46] 2025-11-26 13:16:08,823 | INFO     | architecture information:
[2025-11-26 08:16:46] 2025-11-26 13:16:08,824 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:16:46] 2025-11-26 13:16:08,845 | INFO     | cat /etc/os-release:
[2025-11-26 08:16:46] NAME="CentOS Linux"
[2025-11-26 08:16:46] VERSION="7 (Core)"
[2025-11-26 08:16:46] ID="centos"
[2025-11-26 08:16:46] ID_LIKE="rhel fedora"
[2025-11-26 08:16:46] VERSION_ID="7"
[2025-11-26 08:16:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:16:46] ANSI_COLOR="0;31"
[2025-11-26 08:16:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:16:46] HOME_URL="https://www.centos.org/"
[2025-11-26 08:16:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:16:46] 
[2025-11-26 08:16:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:16:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:16:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:16:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:16:46] 
[2025-11-26 08:16:46] 2025-11-26 13:16:08,845 | INFO     | ***************************************
[2025-11-26 08:16:46] 2025-11-26 13:16:09,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 08:16:46] 2025-11-26 13:16:09,394 | INFO     | sufficient remaining disk space (64032342016 B)
[2025-11-26 08:16:46] 2025-11-26 13:16:09,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:16:46] 2025-11-26 13:16:09,395 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:16:46] 2025-11-26 13:16:09,395 | INFO     | update_server=False
[2025-11-26 08:16:46] 2025-11-26 13:16:09,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:16:46] 2025-11-26 13:16:09,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:46] 2025-11-26 13:16:09,396 | INFO     | aborting loop
[2025-11-26 08:16:46] 2025-11-26 13:16:09,762 | INFO     | all payload control threads have been joined
[2025-11-26 08:16:46] 2025-11-26 13:16:09,771 | INFO     | all data control threads have been joined
[2025-11-26 08:16:46] 2025-11-26 13:16:10,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:16:46] 2025-11-26 13:16:10,263 | INFO     | all job control threads have been joined
[2025-11-26 08:16:46] 2025-11-26 13:16:10,401 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,405 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,436 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,534 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,569 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,767 | INFO     | [payload] control thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,776 | INFO     | [data] control thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,930 | INFO     | [job] validate thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,944 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:10,945 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:11,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:16:46] 2025-11-26 13:16:11,273 | INFO     | [job] control thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:11,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:16:46] 2025-11-26 13:16:11,773 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:12,100 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:12,443 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:15,120 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:20,169 | INFO     | job.realtimelogging is not enabled
[2025-11-26 08:16:46] 2025-11-26 13:16:21,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:16:46] 2025-11-26 13:16:39,215 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:16:46] 2025-11-26 13:16:39,303 | INFO     | PID=863144 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:16:46] 2025-11-26 13:16:39,303 | INFO     | .. there are 61 such processes running
[2025-11-26 08:16:46] 2025-11-26 13:16:39,303 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:16:46] 2025-11-26 13:16:39,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:16:46] 2025-11-26 13:16:39,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:16:46] 2025-11-26 13:16:40,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850764973888)>', '<ExcThread(monitor, started 139850401425152)>']
[2025-11-26 08:16:46] 2025-11-26 13:16:40,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:16:46] 2025-11-26 13:16:40,320 | INFO     | [monitor] control thread has ended
[2025-11-26 08:16:46] 2025-11-26 13:16:45,200 | INFO     | all workflow threads have been joined
[2025-11-26 08:16:46] 2025-11-26 13:16:45,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:16:46] 2025-11-26 13:16:45,200 | INFO     | traces error code: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:45,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:16:46] 2025-11-26 13:16:45,441 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:16:46] 2025-11-26 13:16:45,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:16:46] 2025-11-26 13:16:45,545 [wrapper] pilotpid: 863144
[2025-11-26 08:16:46] 2025-11-26 13:16:45,561 [wrapper] Pilot exit status: 0
[2025-11-26 08:16:46] 2025-11-26 13:16:45,651 [wrapper] pandaids: 6896577500
[2025-11-26 08:16:46] 2025-11-26 13:16:45,877 [wrapper] cleanup supervisor_pilot 1022610 863145
[2025-11-26 08:16:46] 2025-11-26 13:16:45,884 [wrapper] Test setup, not cleaning
[2025-11-26 08:16:46] 2025-11-26 13:16:45,891 [wrapper] apfmon messages muted
[2025-11-26 08:16:46] 2025-11-26 13:16:45,895 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:16:46] 2025-11-26 13:16:45,900 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:16:46]  *** Error codes and diagnostics ***
[2025-11-26 08:16:46]     "exeErrorCode": 0,
[2025-11-26 08:16:46]     "exeErrorDiag": "",
[2025-11-26 08:16:46]     "pilotErrorCode": 0,
[2025-11-26 08:16:46]     "pilotErrorDiag": "",
[2025-11-26 08:16:46]  *** Listing of results directory ***
[2025-11-26 08:16:46] total 1308828
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 08:16:46] -rwx------. 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:16:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:18 run_atlas
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:18 job.xml
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas 408937340 Nov 25 19:18 EVNT.47483658._002092.pool.root.1
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 19:18 input.tar.gz
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:18 start_atlas.sh
[2025-11-26 08:16:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:18 shared
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:18 boinc_lockfile
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 19:18 pandaJob.out
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas        57 Nov 25 19:18 setup.sh.local
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas    991877 Nov 25 19:19 agis_schedconf.cvmfs.json
[2025-11-26 08:16:46] drwx------. 5 boincer umatlas      4096 Nov 25 19:19 pilot3
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas       532 Nov 26 08:06 boinc_task_state.xml
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas      6947 Nov 26 08:12 init_data.xml
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas 911992476 Nov 26 08:15 HITS.47556161._000756.pool.root.1
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas      1067 Nov 26 08:15 memory_monitor_summary.json
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas   1948160 Nov 26 08:15 log.47556161._000756.job.log.tgz.1
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas        95 Nov 26 08:15 pilot_heartbeat.json
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas      8611 Nov 26 08:16 heartbeat.json
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:16 wrapper_checkpoint.txt
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas      4895 Nov 26 08:16 pilotlog.txt
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:16 boinc_mmap_file
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas   5745160 Nov 26 08:16 log.47556161._000756.job.log.1
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas       353 Nov 26 08:16 output.list
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:16 runtime_log
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas   7710720 Nov 26 08:16 result.tar.gz
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 08:16 runtime_log.err
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas       663 Nov 26 08:16 6bBODmiW0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcLJKDm89OyJn.diag
[2025-11-26 08:16:46] -rw-r--r--. 1 boincer umatlas     21297 Nov 26 08:16 stderr.txt
[2025-11-26 08:16:46] HITS file was successfully produced:
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas 911992476 Nov 26 08:15 shared/HITS.pool.root.1
[2025-11-26 08:16:46]  *** Contents of shared directory: ***
[2025-11-26 08:16:46] total 1298112
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas 408937340 Nov 25 19:18 ATLAS.root_0
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 19:18 input.tar.gz
[2025-11-26 08:16:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:18 start_atlas.sh
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas 911992476 Nov 26 08:15 HITS.pool.root.1
[2025-11-26 08:16:46] -rw-------. 1 boincer umatlas   7710720 Nov 26 08:16 result.tar.gz
08:16:47 (852175): run_atlas exited; CPU time 193994.011143
08:16:47 (852175): called boinc_finish(0)

</stderr_txt>
]]>

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