Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
03:35:32 (2002231): wrapper (7.7.26015): starting
03:35:32 (2002231): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 03:35:32] Arguments: --nthreads 10
[2025-11-26 03:35:32] Threads: 10
[2025-11-26 03:35:32] Checking for CVMFS
[2025-11-26 03:35:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:35:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:35:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:35:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:35:32] 2.13.3.0 4524 7653 69740 153320 2 84 3441858 4096001 10577 130560 0 1071733354 99.999 1242602 708 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-26 03:35:32] CVMFS is ok
[2025-11-26 03:35:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:35:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 03:35:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 03:35:32] Further information can be found at the LHC@home message board.
[2025-11-26 03:35:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:35:32] Checking for apptainer binary...
[2025-11-26 03:35:32] apptainer is not installed, using version from CVMFS
[2025-11-26 03:35:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:35:32] 7950x-linux
[2025-11-26 03:35:32] apptainer works
[2025-11-26 03:35:32] Set ATHENA_PROC_NUMBER=10
[2025-11-26 03:35:32] Set ATHENA_CORE_NUMBER=10
[2025-11-26 03:35:32] Starting ATLAS job with PandaID=6896577485
[2025-11-26 03:35:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc512/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:32:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:32:26] 2025-11-27 01:31:52,559 | INFO     | time since job start (50167s) is within the limit (172800.0s)
[2025-11-26 17:32:26] 2025-11-27 01:31:53,094 | INFO     | monitor loop #3660: job 0:6896577485 is in state 'finished'
[2025-11-26 17:32:26] 2025-11-27 01:31:53,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:32:26] 2025-11-27 01:31:53,992 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:32:26] 2025-11-27 01:31:53,995 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8528125000003
[2025-11-26 17:32:26] 2025-11-27 01:31:53,998 | INFO     | using path: /var/lib/multiboinc/boinc512/slots/3/PanDA_Pilot-6896577485/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:32:26] 2025-11-27 01:31:53,999 | INFO     | extracted standard info from prmon json
[2025-11-26 17:32:26] 2025-11-27 01:31:53,999 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:32:26] 2025-11-27 01:31:53,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:32:26] 2025-11-27 01:31:54,011 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:32:26] 2025-11-27 01:31:54,013 | INFO     | sum of square deviations: 172224085485.3248
[2025-11-26 17:32:26] 2025-11-27 01:31:54,028 | INFO     | sum of deviations: 1558853862324.943
[2025-11-26 17:32:26] 2025-11-27 01:31:54,028 | INFO     | mean x: 1764182013.5145986
[2025-11-26 17:32:26] 2025-11-27 01:31:54,028 | INFO     | mean y: 3157754.00486618
[2025-11-26 17:32:26] 2025-11-27 01:31:54,028 | INFO     | intersect: -15965003365.049314
[2025-11-26 17:32:26] 2025-11-27 01:31:54,028 | INFO     | chi2: 4.7377249799305625
[2025-11-26 17:32:26] 2025-11-27 01:31:54,029 | INFO     | sum of square deviations: 169100393367.8238
[2025-11-26 17:32:26] 2025-11-27 01:31:54,040 | INFO     | sum of deviations: 1777954670939.8657
[2025-11-26 17:32:26] 2025-11-27 01:31:54,040 | INFO     | mean x: 1764181861.0146878
[2025-11-26 17:32:26] 2025-11-27 01:31:54,043 | INFO     | mean y: 3168435.7613219093
[2025-11-26 17:32:26] 2025-11-27 01:31:54,043 | INFO     | intersect: -18545785340.802063
[2025-11-26 17:32:26] 2025-11-27 01:31:54,043 | INFO     | chi2: 2.6870426837419132
[2025-11-26 17:32:26] 2025-11-27 01:31:54,043 | INFO     | current chi2=2.6870426837419132 (change=43.2841143138432 %)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,044 | INFO     | sum of square deviations: 166014701962.82266
[2025-11-26 17:32:26] 2025-11-27 01:31:54,053 | INFO     | sum of deviations: 1782118543905.2458
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | mean x: 1764181708.5147784
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | mean y: 3168636.3128078817
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | intersect: -18934798305.11319
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | chi2: 2.6186157865257593
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | current chi2=2.6186157865257593 (change=2.5465504374074253 %)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,054 | INFO     | right removable region: 811
[2025-11-26 17:32:26] 2025-11-27 01:31:54,055 | INFO     | sum of square deviations: 169100386047.82376
[2025-11-26 17:32:26] 2025-11-27 01:31:54,066 | INFO     | sum of deviations: 1298812757335.812
[2025-11-26 17:32:26] 2025-11-27 01:31:54,066 | INFO     | mean x: 1764182166.0146878
[2025-11-26 17:32:26] 2025-11-27 01:31:54,066 | INFO     | mean y: 3170433.099143207
[2025-11-26 17:32:26] 2025-11-27 01:31:54,066 | INFO     | intersect: -13547019232.560051
[2025-11-26 17:32:26] 2025-11-27 01:31:54,067 | INFO     | chi2: 2.360480139642875
[2025-11-26 17:32:26] 2025-11-27 01:31:54,067 | INFO     | current chi2=2.360480139642875 (change=50.17692775241102 %)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,067 | INFO     | sum of square deviations: 166014687322.82266
[2025-11-26 17:32:26] 2025-11-27 01:31:54,077 | INFO     | sum of deviations: 1230089078949.125
[2025-11-26 17:32:26] 2025-11-27 01:31:54,077 | INFO     | mean x: 1764182318.5147784
[2025-11-26 17:32:26] 2025-11-27 01:31:54,077 | INFO     | mean y: 3173828.6145320195
[2025-11-26 17:32:26] 2025-11-27 01:31:54,077 | INFO     | intersect: -13068569631.410305
[2025-11-26 17:32:26] 2025-11-27 01:31:54,078 | INFO     | chi2: 2.291615535987007
[2025-11-26 17:32:26] 2025-11-27 01:31:54,078 | INFO     | current chi2=2.291615535987007 (change=2.9173981385959364 %)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,078 | INFO     | left removable region: 20
[2025-11-26 17:32:26] 2025-11-27 01:31:54,079 | INFO     | sum of square deviations: 153464488091.81815
[2025-11-26 17:32:26] 2025-11-27 01:31:54,087 | INFO     | sum of deviations: 1364253802925.9758
[2025-11-26 17:32:26] 2025-11-27 01:31:54,087 | INFO     | mean x: 1764182288.0151706
[2025-11-26 17:32:26] 2025-11-27 01:31:54,087 | INFO     | mean y: 3189332.585335019
[2025-11-26 17:32:26] 2025-11-27 01:31:54,087 | INFO     | intersect: -15679868196.915277
[2025-11-26 17:32:26] 2025-11-27 01:31:54,088 | INFO     | chi2: 0.1355085850555795
[2025-11-26 17:32:26] 2025-11-27 01:31:54,088 | INFO     | current memory leak: 8.89 B/s (using 791 data points, chi2=0.14)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | could have reported an average CPU frequency of 3999 MHz (31 samples)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | ..............................
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . Timing measurements:
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . get job = 0 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . initial setup = 3 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . payload setup = 6 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . stage-in = 0 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . payload execution = 50133 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . stage-out = 3 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | . log creation = 0 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,089 | INFO     | ..............................
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | 
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | job summary report
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | --------------------------------------------------
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | PanDA job id: 6896577485
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | task id: 47556161
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | errors: (none)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | pilot state: finished 
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | transexitcode: 0
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | exeerrorcode: 0
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | exeerrordiag: 
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | exitcode: 0
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | exitmsg: OK
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | cpuconsumptiontime: 134252 s
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | nevents: 1000
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | neventsw: 0
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | pid: 2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | pgrp: 2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | corecount: 10
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | event service: False
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | sizes: {0: 2284270, 4: 2284532, 11: 2284560, 50144: 2332796, 50148: 2341874, 50153: 2342064}
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | --------------------------------------------------
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | 
[2025-11-26 17:32:26] 2025-11-27 01:31:54,147 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc512/slots/3
[2025-11-26 17:32:26] 2025-11-27 01:31:54,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | job 6896577485 has completed (purged errors)
[2025-11-26 17:32:26] 2025-11-27 01:31:54,176 | INFO     | overall cleanup function is called
[2025-11-26 17:32:26] 2025-11-27 01:31:55,193 | INFO     | --- collectZombieJob: --- 10, [2012785]
[2025-11-26 17:32:26] 2025-11-27 01:31:55,194 | INFO     | zombie collector waiting for pid 2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:55,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:32:26] 2025-11-27 01:31:55,194 | INFO     | collected zombie processes
[2025-11-26 17:32:26] 2025-11-27 01:31:55,194 | INFO     | will attempt to kill all subprocesses of pid=2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:55,457 | INFO     | process IDs to be killed: [2012785] (in reverse order)
[2025-11-26 17:32:26] 2025-11-27 01:31:55,597 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:32:26] 2025-11-27 01:31:55,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:32:26] 2025-11-27 01:31:55,602 | INFO     | did not find any defunct processes belonging to 2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:55,606 | INFO     | did not find any defunct processes belonging to 2012785
[2025-11-26 17:32:26] 2025-11-27 01:31:55,607 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:32:26] 2025-11-27 01:31:55,607 | INFO     | ready for new job
[2025-11-26 17:32:26] 2025-11-27 01:31:55,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:32:26] 2025-11-27 01:31:55,610 | INFO     | ***************************************
[2025-11-26 17:32:26] 2025-11-27 01:31:55,610 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:32:26] 2025-11-27 01:31:55,610 | INFO     | ***************************************
[2025-11-26 17:32:26] 2025-11-27 01:31:55,610 | INFO     | 
[2025-11-26 17:32:26] 2025-11-27 01:31:55,612 | INFO     | architecture information:
[2025-11-26 17:32:26] 2025-11-27 01:31:55,613 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:32:26] 2025-11-27 01:31:55,645 | INFO     | cat /etc/os-release:
[2025-11-26 17:32:26] NAME="CentOS Linux"
[2025-11-26 17:32:26] VERSION="7 (Core)"
[2025-11-26 17:32:26] ID="centos"
[2025-11-26 17:32:26] ID_LIKE="rhel fedora"
[2025-11-26 17:32:26] VERSION_ID="7"
[2025-11-26 17:32:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:32:26] ANSI_COLOR="0;31"
[2025-11-26 17:32:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:32:26] HOME_URL="https://www.centos.org/"
[2025-11-26 17:32:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:32:26] 
[2025-11-26 17:32:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:32:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:32:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:32:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:32:26] 
[2025-11-26 17:32:26] 2025-11-27 01:31:55,646 | INFO     | ***************************************
[2025-11-26 17:32:26] 2025-11-27 01:31:56,148 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc512/slots/3
[2025-11-26 17:32:26] 2025-11-27 01:31:56,176 | INFO     | sufficient remaining disk space (191382945792 B)
[2025-11-26 17:32:26] 2025-11-27 01:31:56,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:32:26] 2025-11-27 01:31:56,176 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:32:26] 2025-11-27 01:31:56,176 | INFO     | update_server=False
[2025-11-26 17:32:26] 2025-11-27 01:31:56,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:32:26] 2025-11-27 01:31:56,273 | INFO     | all data control threads have been joined
[2025-11-26 17:32:26] 2025-11-27 01:31:56,286 | INFO     | all payload control threads have been joined
[2025-11-26 17:32:26] 2025-11-27 01:31:56,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:32:26] 2025-11-27 01:31:56,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:32:26] 2025-11-27 01:31:56,610 | INFO     | aborting loop
[2025-11-26 17:32:26] 2025-11-27 01:31:56,766 | INFO     | all job control threads have been joined
[2025-11-26 17:32:26] 2025-11-27 01:31:57,182 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,201 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,278 | INFO     | [data] control thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,291 | INFO     | [payload] control thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,320 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,614 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,661 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,771 | INFO     | [job] control thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:57,808 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,414 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,514 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,552 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,669 | INFO     | [job] validate thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:31:58,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:32:26] 2025-11-27 01:31:59,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:32:26] 2025-11-27 01:32:00,168 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:32:02,974 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:32:26] 2025-11-27 01:32:08,535 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:32:26] 2025-11-27 01:32:10,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123698356062016)>', '<ExcThread(monitor, started 123697868302080)>']
[2025-11-26 17:32:26] 2025-11-27 01:32:15,580 | INFO     | all workflow threads have been joined
[2025-11-26 17:32:26] 2025-11-27 01:32:15,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:32:26] 2025-11-27 01:32:15,581 | INFO     | traces error code: 0
[2025-11-26 17:32:26] 2025-11-27 01:32:15,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:32:26] 2025-11-27 01:32:25,876 | INFO     | PID=2006073 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:32:26] 2025-11-27 01:32:25,876 | INFO     | .. there are 11 such processes running
[2025-11-26 17:32:26] 2025-11-27 01:32:25,877 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:32:26] 2025-11-27 01:32:25,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:32:26] 2025-11-27 01:32:25,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:32:26] 2025-11-27 01:32:25,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:32:26] 2025-11-27 01:32:25,877 | INFO     | [monitor] control thread has ended
[2025-11-26 17:32:26] 2025-11-27 01:32:25,964 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:32:26] 2025-11-27 01:32:25,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:32:26] 2025-11-27 01:32:25,968 [wrapper] pilotpid: 2006073
[2025-11-26 17:32:26] 2025-11-27 01:32:25,969 [wrapper] Pilot exit status: 0
[2025-11-26 17:32:26] 2025-11-27 01:32:25,976 [wrapper] pandaids: 6896577485
[2025-11-26 17:32:26] 2025-11-27 01:32:26,023 [wrapper] cleanup supervisor_pilot 2984087 2006074
[2025-11-26 17:32:26] 2025-11-27 01:32:26,026 [wrapper] Test setup, not cleaning
[2025-11-26 17:32:26] 2025-11-27 01:32:26,027 [wrapper] apfmon messages muted
[2025-11-26 17:32:26] 2025-11-27 01:32:26,029 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:32:26] 2025-11-27 01:32:26,030 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:32:26]  *** Error codes and diagnostics ***
[2025-11-26 17:32:26]     "exeErrorCode": 0,
[2025-11-26 17:32:26]     "exeErrorDiag": "",
[2025-11-26 17:32:26]     "pilotErrorCode": 0,
[2025-11-26 17:32:26]     "pilotErrorDiag": "",
[2025-11-26 17:32:26]  *** Listing of results directory ***
[2025-11-26 17:32:26] total 1325816
[2025-11-26 17:32:26] -rw-r--r-- 1 root root    576529 Nov 24 20:09 pilot3.tar.gz
[2025-11-26 17:32:26] -rw-r--r-- 1 root root      5112 Nov 24 21:05 queuedata.json
[2025-11-26 17:32:26] -rwx------ 1 4871 1028     36292 Nov 24 21:09 runpilot2-wrapper.sh
[2025-11-26 17:32:26] -rw-r--r-- 1 root root       100 Nov 26 03:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:32:26] -rwxr-xr-x 1 root root      7986 Nov 26 03:35 run_atlas
[2025-11-26 17:32:26] -rw-r--r-- 1 root root       105 Nov 26 03:35 job.xml
[2025-11-26 17:32:26] -rw-r--r-- 1 root root      7066 Nov 26 03:35 init_data.xml
[2025-11-26 17:32:26] -rw-r--r-- 2 root root 410625898 Nov 26 03:35 EVNT.47483658._002091.pool.root.1
[2025-11-26 17:32:26] -rw-r--r-- 2 root root     15847 Nov 26 03:35 start_atlas.sh
[2025-11-26 17:32:26] drwxrwx--x 2 root root      4096 Nov 26 03:35 shared
[2025-11-26 17:32:26] -rw-r--r-- 2 root root    590104 Nov 26 03:35 input.tar.gz
[2025-11-26 17:32:26] -rw-r--r-- 1 root root         0 Nov 26 03:35 boinc_lockfile
[2025-11-26 17:32:26] -rw-r--r-- 1 root root      2781 Nov 26 03:35 pandaJob.out
[2025-11-26 17:32:26] -rw------- 1 root root    991830 Nov 26 03:35 agis_schedconf.cvmfs.json
[2025-11-26 17:32:26] drwxr-xr-x 5  320  320      4096 Nov 26 03:35 pilot3
[2025-11-26 17:32:26] -rw-r--r-- 1 root root       533 Nov 26 17:24 boinc_task_state.xml
[2025-11-26 17:32:26] -rw------- 1 root root 924328019 Nov 26 17:31 HITS.47556161._000741.pool.root.1
[2025-11-26 17:32:26] -rw------- 1 root root      1053 Nov 26 17:31 memory_monitor_summary.json
[2025-11-26 17:32:26] -rw------- 1 root root   1516240 Nov 26 17:31 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:32:26] -rw------- 1 root root   2222375 Nov 26 17:31 log.47556161._000741.job.log.tgz.1
[2025-11-26 17:32:26] -rw------- 1 root root      8594 Nov 26 17:31 heartbeat.json
[2025-11-26 17:32:26] -rw-r--r-- 1 root root      8192 Nov 26 17:32 boinc_mmap_file
[2025-11-26 17:32:26] -rw-r--r-- 1 root root        29 Nov 26 17:32 wrapper_checkpoint.txt
[2025-11-26 17:32:26] -rw------- 1 root root       823 Nov 26 17:32 pilotlog.txt
[2025-11-26 17:32:26] -rw------- 1 root root        95 Nov 26 17:32 pilot_heartbeat.json
[2025-11-26 17:32:26] -rw------- 1 root root   7162531 Nov 26 17:32 log.47556161._000741.job.log.1
[2025-11-26 17:32:26] -rw------- 1 root root       353 Nov 26 17:32 output.list
[2025-11-26 17:32:26] -rw-r--r-- 1 root root       620 Nov 26 17:32 runtime_log
[2025-11-26 17:32:26] -rw------- 1 root root   9400320 Nov 26 17:32 result.tar.gz
[2025-11-26 17:32:26] -rw-r--r-- 1 root root      9021 Nov 26 17:32 runtime_log.err
[2025-11-26 17:32:26] -rw------- 1 root root       662 Nov 26 17:32 1yTKDmgT0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmh8LKDmA8Qzun.diag
[2025-11-26 17:32:26] -rw-r--r-- 1 root root     21456 Nov 26 17:32 stderr.txt
[2025-11-26 17:32:26] HITS file was successfully produced:
[2025-11-26 17:32:26] -rw------- 1 root root 924328019 Nov 26 17:31 shared/HITS.pool.root.1
[2025-11-26 17:32:26]  *** Contents of shared directory: ***
[2025-11-26 17:32:26] total 1313456
[2025-11-26 17:32:26] -rw-r--r-- 2 root root 410625898 Nov 26 03:35 ATLAS.root_0
[2025-11-26 17:32:26] -rw-r--r-- 2 root root     15847 Nov 26 03:35 start_atlas.sh
[2025-11-26 17:32:26] -rw-r--r-- 2 root root    590104 Nov 26 03:35 input.tar.gz
[2025-11-26 17:32:26] -rw------- 1 root root 924328019 Nov 26 17:31 HITS.pool.root.1
[2025-11-26 17:32:26] -rw------- 1 root root   9400320 Nov 26 17:32 result.tar.gz
17:32:27 (2002231): run_atlas exited; CPU time 134265.677582
17:32:27 (2002231): called boinc_finish(0)

</stderr_txt>
]]>

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