Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:30 (4154862): wrapper (7.7.26015): starting
19:12:30 (4154862): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:12:30] Arguments: --nthreads 8
[2025-11-25 19:12:30] Threads: 8
[2025-11-25 19:12:30] Checking for CVMFS
[2025-11-25 19:12:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:12:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:12:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:12:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:12:32] 2.13.3.0 10223 29292 238064 153302 1 844 39659481 40960000 45274 16776704 0 379774604 99.770 229996205 51108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:12:32] CVMFS is ok
[2025-11-25 19:12:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:12:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:12:32] Further information can be found at the LHC@home message board.
[2025-11-25 19:12:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:12:32] Checking for apptainer binary...
[2025-11-25 19:12:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:12:32] Running /usr/bin/apptainer --version
[2025-11-25 19:12:32] apptainer version 1.4.4-1.el9
[2025-11-25 19:12:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:12:33] c8-7-6.aglt2.org
[2025-11-25 19:12:33] apptainer works
[2025-11-25 19:12:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:12:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:12:33] Starting ATLAS job with PandaID=6891575221
[2025-11-25 19:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:26:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:26:33] 2025-11-26 14:25:24,324 | INFO     | time since job start (51088s) is within the limit (172800.0s)
[2025-11-26 09:26:33] 2025-11-26 14:25:24,324 | INFO     | 51093s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 09:26:33] 2025-11-26 14:25:26,331 | INFO     | time since job start (51090s) is within the limit (172800.0s)
[2025-11-26 09:26:33] 2025-11-26 14:25:28,338 | INFO     | time since job start (51092s) is within the limit (172800.0s)
[2025-11-26 09:26:33] 2025-11-26 14:25:30,344 | INFO     | time since job start (51094s) is within the limit (172800.0s)
[2025-11-26 09:26:33] 2025-11-26 14:25:32,351 | INFO     | time since job start (51096s) is within the limit (172800.0s)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,287 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 09:26:33] 2025-11-26 14:25:35,398 | INFO     | sufficient remaining disk space (158010966016 B)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,399 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,405 | INFO     | size of work directory /tmp/boinchome/slots/8/PanDA_Pilot-6891575221: 8291250 B (within 2537553920 B limit)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,405 | INFO     | pfn file=/tmp/boinchome/slots/8/PanDA_Pilot-6891575221/HITS.47493068._003605.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,405 | INFO     | total size of present files: 0 B (workdir size: 8291250 B)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,405 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/8/PanDA_Pilot-6891575221/HITS.47493068._003605.pool.root.1 since it does not exist
[2025-11-26 09:26:33] 2025-11-26 14:25:35,427 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.993398437502
[2025-11-26 09:26:33] 2025-11-26 14:25:35,556 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6891575221/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,556 | INFO     | extracted standard info from prmon json
[2025-11-26 09:26:33] 2025-11-26 14:25:35,556 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:26:33] 2025-11-26 14:25:35,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:26:33] 2025-11-26 14:25:35,648 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:26:33] 2025-11-26 14:25:35,649 | INFO     | sum of square deviations: 180524196929.16156
[2025-11-26 09:26:33] 2025-11-26 14:25:35,836 | INFO     | sum of deviations: 1145401955410.77
[2025-11-26 09:26:33] 2025-11-26 14:25:35,935 | INFO     | mean x: 1764141643.8622754
[2025-11-26 09:26:33] 2025-11-26 14:25:35,935 | INFO     | mean y: 2832511.919760479
[2025-11-26 09:26:33] 2025-11-26 14:25:35,935 | INFO     | intersect: -11190410958.341084
[2025-11-26 09:26:33] 2025-11-26 14:25:35,936 | INFO     | chi2: 20.63473826592513
[2025-11-26 09:26:33] 2025-11-26 14:25:35,936 | INFO     | sum of square deviations: 177301085164.21683
[2025-11-26 09:26:33] 2025-11-26 14:25:35,954 | INFO     | sum of deviations: 1416696867768.4316
[2025-11-26 09:26:33] 2025-11-26 14:25:35,954 | INFO     | mean x: 1764141491.373494
[2025-11-26 09:26:33] 2025-11-26 14:25:35,954 | INFO     | mean y: 2845343.646987952
[2025-11-26 09:26:33] 2025-11-26 14:25:35,954 | INFO     | intersect: -14093254084.13904
[2025-11-26 09:26:33] 2025-11-26 14:25:35,955 | INFO     | chi2: 17.481040119859962
[2025-11-26 09:26:33] 2025-11-26 14:25:35,955 | INFO     | current chi2=17.481040119859962 (change=15.283441473415635 %)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,955 | INFO     | right removable region: 829
[2025-11-26 09:26:33] 2025-11-26 14:25:35,955 | INFO     | sum of square deviations: 177300136614.21677
[2025-11-26 09:26:33] 2025-11-26 14:25:35,968 | INFO     | sum of deviations: 803299126665.9749
[2025-11-26 09:26:33] 2025-11-26 14:25:35,968 | INFO     | mean x: 1764141796.373494
[2025-11-26 09:26:33] 2025-11-26 14:25:35,968 | INFO     | mean y: 2848692.4807228916
[2025-11-26 09:26:33] 2025-11-26 14:25:35,969 | INFO     | intersect: -7990002251.708224
[2025-11-26 09:26:33] 2025-11-26 14:25:35,969 | INFO     | chi2: 16.05026016970717
[2025-11-26 09:26:33] 2025-11-26 14:25:35,969 | INFO     | current chi2=16.05026016970717 (change=22.217282512317933 %)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,969 | INFO     | left removable region: 10
[2025-11-26 09:26:33] 2025-11-26 14:25:35,970 | INFO     | sum of square deviations: 170343905652.58887
[2025-11-26 09:26:33] 2025-11-26 14:25:35,978 | INFO     | sum of deviations: 818903018985.9822
[2025-11-26 09:26:33] 2025-11-26 14:25:35,991 | INFO     | mean x: 1764141765.8986568
[2025-11-26 09:26:33] 2025-11-26 14:25:35,991 | INFO     | mean y: 2879094.52991453
[2025-11-26 09:26:33] 2025-11-26 14:25:35,991 | INFO     | intersect: -8477970352.235815
[2025-11-26 09:26:33] 2025-11-26 14:25:35,992 | INFO     | chi2: 8.682279229391225
[2025-11-26 09:26:33] 2025-11-26 14:25:35,992 | INFO     | current memory leak: 4.81 B/s (using 819 data points, chi2=8.68)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | could have reported an average CPU frequency of 3792 MHz (31 samples)
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | ..............................
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . Timing measurements:
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . get job = 0 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . initial setup = 5 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . payload setup = 53 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . stage-in = 0 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . payload execution = 50911 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . stage-out = 6 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | . log creation = 1 s
[2025-11-26 09:26:33] 2025-11-26 14:25:35,993 | INFO     | ..............................
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | 
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | job summary report
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | --------------------------------------------------
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | PanDA job id: 6891575221
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | task id: 47493068
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | errors: (none)
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | pilot state: finished 
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | transexitcode: 0
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | exeerrorcode: 0
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | exeerrordiag: 
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | exitcode: 0
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | exitmsg: OK
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | cpuconsumptiontime: 141084 s
[2025-11-26 09:26:33] 2025-11-26 14:25:36,084 | INFO     | nevents: 1000
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | neventsw: 0
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | pid: 10135
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | pgrp: 10135
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | corecount: 8
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | event service: False
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | sizes: {0: 2284077, 1: 2284133, 2: 2284360, 3: 2284388, 14: 2284388, 25: 2284416, 36: 2284572, 44: 2284862, 47: 2284890, 50966: 2333030, 50973: 2342360, 51019: 234
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | --------------------------------------------------
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | 
[2025-11-26 09:26:33] 2025-11-26 14:25:36,085 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 09:26:33] 2025-11-26 14:25:36,157 | INFO     | PID=4178120 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:26:33] 2025-11-26 14:25:36,157 | INFO     | .. there are 66 such processes running
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | job 6891575221 has completed (purged errors)
[2025-11-26 09:26:33] 2025-11-26 14:25:36,397 | INFO     | overall cleanup function is called
[2025-11-26 09:26:33] 2025-11-26 14:25:37,339 | INFO     | number of running child processes to parent process 10135: 1
[2025-11-26 09:26:33] 2025-11-26 14:25:37,339 | INFO     | maximum number of monitored processes: 16
[2025-11-26 09:26:33] 2025-11-26 14:25:37,339 | INFO     | aborting job monitoring since job object (job id=6891575221) has expired
[2025-11-26 09:26:33] 2025-11-26 14:25:37,452 | INFO     | --- collectZombieJob: --- 10, [10135]
[2025-11-26 09:26:33] 2025-11-26 14:25:37,452 | INFO     | zombie collector waiting for pid 10135
[2025-11-26 09:26:33] 2025-11-26 14:25:37,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:26:33] 2025-11-26 14:25:37,452 | INFO     | collected zombie processes
[2025-11-26 09:26:33] 2025-11-26 14:25:37,452 | INFO     | will attempt to kill all subprocesses of pid=10135
[2025-11-26 09:26:33] 2025-11-26 14:25:39,173 | INFO     | process IDs to be killed: [10135] (in reverse order)
[2025-11-26 09:26:33] 2025-11-26 14:25:39,436 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:26:33] 2025-11-26 14:25:39,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:26:33] 2025-11-26 14:25:39,518 | INFO     | did not find any defunct processes belonging to 10135
[2025-11-26 09:26:33] 2025-11-26 14:25:39,787 | INFO     | did not find any defunct processes belonging to 10135
[2025-11-26 09:26:33] 2025-11-26 14:25:39,802 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:26:33] 2025-11-26 14:25:39,802 | INFO     | ready for new job
[2025-11-26 09:26:33] 2025-11-26 14:25:39,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:26:33] 2025-11-26 14:25:39,804 | INFO     | ***************************************
[2025-11-26 09:26:33] 2025-11-26 14:25:39,804 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:26:33] 2025-11-26 14:25:39,804 | INFO     | ***************************************
[2025-11-26 09:26:33] 2025-11-26 14:25:39,804 | INFO     | 
[2025-11-26 09:26:33] 2025-11-26 14:25:39,813 | INFO     | architecture information:
[2025-11-26 09:26:33] 2025-11-26 14:25:39,825 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:26:33] 2025-11-26 14:25:39,916 | INFO     | cat /etc/os-release:
[2025-11-26 09:26:33] NAME="CentOS Linux"
[2025-11-26 09:26:33] VERSION="7 (Core)"
[2025-11-26 09:26:33] ID="centos"
[2025-11-26 09:26:33] ID_LIKE="rhel fedora"
[2025-11-26 09:26:33] VERSION_ID="7"
[2025-11-26 09:26:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:26:33] ANSI_COLOR="0;31"
[2025-11-26 09:26:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:26:33] HOME_URL="https://www.centos.org/"
[2025-11-26 09:26:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:26:33] 
[2025-11-26 09:26:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:26:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:26:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:26:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:26:33] 
[2025-11-26 09:26:33] 2025-11-26 14:25:39,916 | INFO     | ***************************************
[2025-11-26 09:26:33] 2025-11-26 14:25:40,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 09:26:33] 2025-11-26 14:25:40,524 | INFO     | sufficient remaining disk space (158023548928 B)
[2025-11-26 09:26:33] 2025-11-26 14:25:40,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:26:33] 2025-11-26 14:25:40,525 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:26:33] 2025-11-26 14:25:40,525 | INFO     | update_server=False
[2025-11-26 09:26:33] 2025-11-26 14:25:40,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:26:33] 2025-11-26 14:25:40,577 | INFO     | all payload control threads have been joined
[2025-11-26 09:26:33] 2025-11-26 14:25:40,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:26:33] 2025-11-26 14:25:40,867 | INFO     | aborting loop
[2025-11-26 09:26:33] 2025-11-26 14:25:40,907 | INFO     | all job control threads have been joined
[2025-11-26 09:26:33] 2025-11-26 14:25:41,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:26:33] 2025-11-26 14:25:41,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:26:33] 2025-11-26 14:25:41,493 | INFO     | all data control threads have been joined
[2025-11-26 09:26:33] 2025-11-26 14:25:41,531 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:41,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:26:33] 2025-11-26 14:25:41,583 | INFO     | [payload] control thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:41,777 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:41,884 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:41,913 | INFO     | [job] control thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,137 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,153 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,306 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,468 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,468 | INFO     | [job] validate thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,500 | INFO     | [data] control thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,594 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,719 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:42,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:43,048 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:25:45,567 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:26:33] 2025-11-26 14:26:10,505 | INFO     | PID=4178120 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:26:33] 2025-11-26 14:26:10,505 | INFO     | .. there are 67 such processes running
[2025-11-26 09:26:33] 2025-11-26 14:26:10,505 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:26:33] 2025-11-26 14:26:10,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:26:33] 2025-11-26 14:26:10,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:26:33] 2025-11-26 14:26:27,113 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:26:33] 2025-11-26 14:26:27,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850731161408)>', '<ExcThread(monitor, started 139850082666240)>']
[2025-11-26 09:26:33] 2025-11-26 14:26:27,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:26:33] 2025-11-26 14:26:27,647 | INFO     | [monitor] control thread has ended
[2025-11-26 09:26:33] 2025-11-26 14:26:32,165 | INFO     | all workflow threads have been joined
[2025-11-26 09:26:33] 2025-11-26 14:26:32,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:26:33] 2025-11-26 14:26:32,165 | INFO     | traces error code: 0
[2025-11-26 09:26:33] 2025-11-26 14:26:32,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:26:33] 2025-11-26 14:26:32,340 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:26:33] 2025-11-26 14:26:32,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:26:33] 2025-11-26 14:26:32,404 [wrapper] pilotpid: 4178120
[2025-11-26 09:26:33] 2025-11-26 14:26:32,427 [wrapper] Pilot exit status: 0
[2025-11-26 09:26:33] 2025-11-26 14:26:32,562 [wrapper] pandaids: 6891575221
[2025-11-26 09:26:33] 2025-11-26 14:26:32,812 [wrapper] cleanup supervisor_pilot 2441539 4178121
[2025-11-26 09:26:33] 2025-11-26 14:26:32,841 [wrapper] Test setup, not cleaning
[2025-11-26 09:26:33] 2025-11-26 14:26:32,863 [wrapper] apfmon messages muted
[2025-11-26 09:26:33] 2025-11-26 14:26:32,870 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:26:33] 2025-11-26 14:26:32,875 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:26:33]  *** Error codes and diagnostics ***
[2025-11-26 09:26:33]     "exeErrorCode": 0,
[2025-11-26 09:26:33]     "exeErrorDiag": "",
[2025-11-26 09:26:33]     "pilotErrorCode": 0,
[2025-11-26 09:26:33]     "pilotErrorDiag": "",
[2025-11-26 09:26:33]  *** Listing of results directory ***
[2025-11-26 09:26:33] total 1315784
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:24 pilot3.tar.gz
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 11:32 queuedata.json
[2025-11-26 09:26:33] -rwx------. 1 boincer umatlas     36292 Nov 18 11:34 runpilot2-wrapper.sh
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:26:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:12 run_atlas
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:12 job.xml
[2025-11-26 09:26:33] -rw-r--r--. 2 boincer umatlas 408585341 Nov 25 19:12 EVNT.47493065._000361.pool.root.1
[2025-11-26 09:26:33] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 19:12 start_atlas.sh
[2025-11-26 09:26:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:12 shared
[2025-11-26 09:26:33] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 19:12 input.tar.gz
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:12 boinc_lockfile
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas      2773 Nov 25 19:12 pandaJob.out
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas    991877 Nov 25 19:13 agis_schedconf.cvmfs.json
[2025-11-26 09:26:33] drwx------. 5 boincer umatlas      4096 Nov 25 19:13 pilot3
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas       533 Nov 26 09:08 boinc_task_state.xml
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas      7174 Nov 26 09:20 init_data.xml
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas 918760728 Nov 26 09:23 HITS.47493068._003605.pool.root.1
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas      1074 Nov 26 09:24 memory_monitor_summary.json
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas   1516240 Nov 26 09:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas   1975545 Nov 26 09:24 log.47493068._003605.job.log.tgz.1
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas      8637 Nov 26 09:25 heartbeat.json
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas        95 Nov 26 09:26 pilot_heartbeat.json
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas        29 Nov 26 09:26 wrapper_checkpoint.txt
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas      4825 Nov 26 09:26 pilotlog.txt
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas   6073599 Nov 26 09:26 log.47493068._003605.job.log.1
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 09:26 boinc_mmap_file
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas       353 Nov 26 09:26 output.list
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas       620 Nov 26 09:26 runtime_log
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas   8069120 Nov 26 09:26 result.tar.gz
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas      8694 Nov 26 09:26 runtime_log.err
[2025-11-26 09:26:33] -rw-------. 1 boincer umatlas       664 Nov 26 09:26 0FjNDmnpdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5pFKDm6p1rln.diag
[2025-11-26 09:26:33] -rw-r--r--. 1 boincer umatlas     22023 Nov 26 09:26 stderr.txt
[2025-11-26 09:26:54] HITS file was successfully produced:
[2025-11-26 09:26:54] -rw-------. 1 boincer umatlas 918760728 Nov 26 09:23 shared/HITS.pool.root.1
[2025-11-26 09:26:54]  *** Contents of shared directory: ***
[2025-11-26 09:26:54] total 1304724
[2025-11-26 09:26:54] -rw-r--r--. 2 boincer umatlas 408585341 Nov 25 19:12 ATLAS.root_0
[2025-11-26 09:26:54] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 19:12 start_atlas.sh
[2025-11-26 09:26:54] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 19:12 input.tar.gz
[2025-11-26 09:26:54] -rw-------. 1 boincer umatlas 918760728 Nov 26 09:23 HITS.pool.root.1
[2025-11-26 09:26:54] -rw-------. 1 boincer umatlas   8069120 Nov 26 09:26 result.tar.gz
09:26:56 (4154862): run_atlas exited; CPU time 142121.154245
09:26:56 (4154862): called boinc_finish(0)

</stderr_txt>
]]>

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