Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:44 (1927): wrapper (7.7.26015): starting
19:48:44 (1927): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:48:44] Arguments: --nthreads 8
[2025-11-25 19:48:44] Threads: 8
[2025-11-25 19:48:44] Checking for CVMFS
[2025-11-25 19:48:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:48:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:48:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:48:44] 2.11.2.0 13817 544659 301396 153303 1 90 13250946 18432000 2396 130560 8 259518884 99.606 266384012 24621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 19:48:44] CVMFS is ok
[2025-11-25 19:48:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:48:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:48:44] Further information can be found at the LHC@home message board.
[2025-11-25 19:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:48:44] Checking for apptainer binary...
[2025-11-25 19:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:48:44] Running /usr/bin/apptainer --version
[2025-11-25 19:48:44] apptainer version 1.3.2-1.el7
[2025-11-25 19:48:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:48:45] c-9-29.aglt2.org
[2025-11-25 19:48:45] apptainer works
[2025-11-25 19:48:45] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:48:45] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:48:45] Starting ATLAS job with PandaID=6896577489
[2025-11-25 19:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:12:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:12:49] 2025-11-26 18:12:15,595 | INFO     | extracted standard info from prmon json
[2025-11-26 13:12:49] 2025-11-26 18:12:15,595 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:12:49] 2025-11-26 18:12:15,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:12:49] 2025-11-26 18:12:15,622 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:12:49] 2025-11-26 18:12:15,624 | INFO     | sum of square deviations: 334904382665.6684
[2025-11-26 13:12:49] 2025-11-26 18:12:15,638 | INFO     | monitor loop #4389: job 0:6896577489 is in state 'finished'
[2025-11-26 13:12:49] 2025-11-26 18:12:15,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,655 | INFO     | sum of deviations: 1829435513009.7986
[2025-11-26 13:12:49] 2025-11-26 18:12:15,656 | INFO     | mean x: 1764149421.153996
[2025-11-26 13:12:49] 2025-11-26 18:12:15,657 | INFO     | mean y: 2858148.805068226
[2025-11-26 13:12:49] 2025-11-26 18:12:15,657 | INFO     | intersect: -9633915116.526241
[2025-11-26 13:12:49] 2025-11-26 18:12:15,658 | INFO     | chi2: 4.884526225485665
[2025-11-26 13:12:49] 2025-11-26 18:12:15,659 | INFO     | sum of square deviations: 330032151776.01965
[2025-11-26 13:12:49] 2025-11-26 18:12:15,681 | INFO     | sum of deviations: 2112152734266.2546
[2025-11-26 13:12:49] 2025-11-26 18:12:15,681 | INFO     | mean x: 1764149268.657199
[2025-11-26 13:12:49] 2025-11-26 18:12:15,681 | INFO     | mean y: 2866992.0607247795
[2025-11-26 13:12:49] 2025-11-26 18:12:15,681 | INFO     | intersect: -11287404823.56806
[2025-11-26 13:12:49] 2025-11-26 18:12:15,682 | INFO     | chi2: 2.5231839201331114
[2025-11-26 13:12:49] 2025-11-26 18:12:15,682 | INFO     | current chi2=2.5231839201331114 (change=48.3433233100876 %)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,683 | INFO     | sum of square deviations: 325207410148.84985
[2025-11-26 13:12:49] 2025-11-26 18:12:15,706 | INFO     | sum of deviations: 2214238531558.4087
[2025-11-26 13:12:49] 2025-11-26 18:12:15,706 | INFO     | mean x: 1764149116.160433
[2025-11-26 13:12:49] 2025-11-26 18:12:15,706 | INFO     | mean y: 2870214.5127952755
[2025-11-26 13:12:49] 2025-11-26 18:12:15,706 | INFO     | intersect: -12008685569.622702
[2025-11-26 13:12:49] 2025-11-26 18:12:15,707 | INFO     | chi2: 2.0708396145927095
[2025-11-26 13:12:49] 2025-11-26 18:12:15,707 | INFO     | current chi2=2.0708396145927095 (change=17.927520143539056 %)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,707 | INFO     | right removable region: 1015
[2025-11-26 13:12:49] 2025-11-26 18:12:15,708 | INFO     | sum of square deviations: 330031742466.0196
[2025-11-26 13:12:49] 2025-11-26 18:12:15,728 | INFO     | sum of deviations: 1590382397250.9905
[2025-11-26 13:12:49] 2025-11-26 18:12:15,728 | INFO     | mean x: 1764149573.657199
[2025-11-26 13:12:49] 2025-11-26 18:12:15,728 | INFO     | mean y: 2865619.1714005875
[2025-11-26 13:12:49] 2025-11-26 18:12:15,728 | INFO     | intersect: -8498354315.3054285
[2025-11-26 13:12:49] 2025-11-26 18:12:15,730 | INFO     | chi2: 3.0890137570318226
[2025-11-26 13:12:49] 2025-11-26 18:12:15,730 | INFO     | current chi2=3.0890137570318226 (change=36.75919394363198 %)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,731 | INFO     | sum of square deviations: 325206591528.84955
[2025-11-26 13:12:49] 2025-11-26 18:12:15,749 | INFO     | sum of deviations: 1516334350195.6956
[2025-11-26 13:12:49] 2025-11-26 18:12:15,749 | INFO     | mean x: 1764149726.160433
[2025-11-26 13:12:49] 2025-11-26 18:12:15,749 | INFO     | mean y: 2867959.057086614
[2025-11-26 13:12:49] 2025-11-26 18:12:15,749 | INFO     | intersect: -8222798120.125345
[2025-11-26 13:12:49] 2025-11-26 18:12:15,750 | INFO     | chi2: 3.0220826608797724
[2025-11-26 13:12:49] 2025-11-26 18:12:15,750 | INFO     | current chi2=3.0220826608797724 (change=2.1667464574959694 %)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,750 | INFO     | left removable region: 20
[2025-11-26 13:12:49] 2025-11-26 18:12:15,751 | INFO     | sum of square deviations: 305455497962.21564
[2025-11-26 13:12:49] 2025-11-26 18:12:15,768 | INFO     | sum of deviations: 1794776425677.4573
[2025-11-26 13:12:49] 2025-11-26 18:12:15,768 | INFO     | mean x: 1764149695.6693468
[2025-11-26 13:12:49] 2025-11-26 18:12:15,768 | INFO     | mean y: 2883435.8281407035
[2025-11-26 13:12:49] 2025-11-26 18:12:15,768 | INFO     | intersect: -10362797674.109076
[2025-11-26 13:12:49] 2025-11-26 18:12:15,769 | INFO     | chi2: 0.17059109675640494
[2025-11-26 13:12:49] 2025-11-26 18:12:15,769 | INFO     | current memory leak: 5.88 B/s (using 995 data points, chi2=0.17)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,769 | INFO     | could have reported an average CPU frequency of 3001 MHz (37 samples)
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | ..............................
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . Timing measurements:
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . get job = 0 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . initial setup = 2 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . payload setup = 4 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . stage-in = 0 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . payload execution = 62570 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . stage-out = 4 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | . log creation = 0 s
[2025-11-26 13:12:49] 2025-11-26 18:12:15,770 | INFO     | ..............................
[2025-11-26 13:12:49] 2025-11-26 18:12:16,064 | INFO     | time since job start (62602s) is within the limit (172800.0s)
[2025-11-26 13:12:49] 2025-11-26 18:12:16,159 | INFO     | 
[2025-11-26 13:12:49] 2025-11-26 18:12:16,159 | INFO     | job summary report
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | --------------------------------------------------
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | PanDA job id: 6896577489
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | task id: 47556161
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | errors: (none)
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | pilot state: finished 
[2025-11-26 13:12:49] 2025-11-26 18:12:16,160 | INFO     | transexitcode: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | exeerrorcode: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | exeerrordiag: 
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | exitcode: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | exitmsg: OK
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | cpuconsumptiontime: 483581 s
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | nevents: 1000
[2025-11-26 13:12:49] 2025-11-26 18:12:16,161 | INFO     | neventsw: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | pid: 13091
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | pgrp: 13091
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | corecount: 8
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | event service: False
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | sizes: {0: 2283434, 1: 2284290, 4: 2284552, 12: 2284580, 62578: 2337645, 62583: 2346823, 62587: 2347013}
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | --------------------------------------------------
[2025-11-26 13:12:49] 2025-11-26 18:12:16,162 | INFO     | 
[2025-11-26 13:12:49] 2025-11-26 18:12:16,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 13:12:49] 2025-11-26 18:12:16,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,185 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:12:49] 2025-11-26 18:12:16,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:12:49] 2025-11-26 18:12:16,189 | INFO     | job 6896577489 has completed (purged errors)
[2025-11-26 13:12:49] 2025-11-26 18:12:16,189 | INFO     | overall cleanup function is called
[2025-11-26 13:12:49] 2025-11-26 18:12:17,205 | INFO     | --- collectZombieJob: --- 10, [13091]
[2025-11-26 13:12:49] 2025-11-26 18:12:17,205 | INFO     | zombie collector waiting for pid 13091
[2025-11-26 13:12:49] 2025-11-26 18:12:17,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:12:49] 2025-11-26 18:12:17,206 | INFO     | collected zombie processes
[2025-11-26 13:12:49] 2025-11-26 18:12:17,206 | INFO     | will attempt to kill all subprocesses of pid=13091
[2025-11-26 13:12:49] 2025-11-26 18:12:17,451 | INFO     | process IDs to be killed: [13091] (in reverse order)
[2025-11-26 13:12:49] 2025-11-26 18:12:17,538 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:12:49] 2025-11-26 18:12:17,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:12:49] 2025-11-26 18:12:17,543 | INFO     | did not find any defunct processes belonging to 13091
[2025-11-26 13:12:49] 2025-11-26 18:12:17,546 | INFO     | did not find any defunct processes belonging to 13091
[2025-11-26 13:12:49] 2025-11-26 18:12:17,547 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:12:49] 2025-11-26 18:12:17,547 | INFO     | ready for new job
[2025-11-26 13:12:49] 2025-11-26 18:12:17,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:12:49] 2025-11-26 18:12:17,551 | INFO     | ***************************************
[2025-11-26 13:12:49] 2025-11-26 18:12:17,551 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:12:49] 2025-11-26 18:12:17,551 | INFO     | ***************************************
[2025-11-26 13:12:49] 2025-11-26 18:12:17,551 | INFO     | 
[2025-11-26 13:12:49] 2025-11-26 18:12:17,552 | INFO     | architecture information:
[2025-11-26 13:12:49] 2025-11-26 18:12:17,553 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:12:49] 2025-11-26 18:12:17,564 | INFO     | cat /etc/os-release:
[2025-11-26 13:12:49] NAME="CentOS Linux"
[2025-11-26 13:12:49] VERSION="7 (Core)"
[2025-11-26 13:12:49] ID="centos"
[2025-11-26 13:12:49] ID_LIKE="rhel fedora"
[2025-11-26 13:12:49] VERSION_ID="7"
[2025-11-26 13:12:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:12:49] ANSI_COLOR="0;31"
[2025-11-26 13:12:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:12:49] HOME_URL="https://www.centos.org/"
[2025-11-26 13:12:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:12:49] 
[2025-11-26 13:12:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:12:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:12:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:12:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:12:49] 
[2025-11-26 13:12:49] 2025-11-26 18:12:17,564 | INFO     | ***************************************
[2025-11-26 13:12:49] 2025-11-26 18:12:18,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 13:12:49] 2025-11-26 18:12:18,082 | INFO     | sufficient remaining disk space (102051610624 B)
[2025-11-26 13:12:49] 2025-11-26 18:12:18,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:12:49] 2025-11-26 18:12:18,083 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:12:49] 2025-11-26 18:12:18,083 | INFO     | update_server=False
[2025-11-26 13:12:49] 2025-11-26 18:12:18,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:12:49] 2025-11-26 18:12:18,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:12:49] 2025-11-26 18:12:18,160 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 13:12:49] 2025-11-26 18:12:18,160 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 13:12:49] 2025-11-26 18:12:18,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:12:49] 2025-11-26 18:12:18,160 | INFO     | will abort loop
[2025-11-26 13:12:49] 2025-11-26 18:12:18,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:12:49] 2025-11-26 18:12:18,359 | INFO     | all data control threads have been joined
[2025-11-26 13:12:49] 2025-11-26 18:12:18,360 | INFO     | all job control threads have been joined
[2025-11-26 13:12:49] 2025-11-26 18:12:18,545 | INFO     | all payload control threads have been joined
[2025-11-26 13:12:49] 2025-11-26 18:12:19,089 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,166 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,225 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,341 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,363 | INFO     | [data] control thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,363 | INFO     | [job] control thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,513 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,549 | INFO     | [payload] control thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,878 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,879 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:19,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:20,088 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:20,152 | INFO     | [job] validate thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:20,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:12:49] 2025-11-26 18:12:21,879 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:22,287 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:28,464 | INFO     | job.realtimelogging is not enabled
[2025-11-26 13:12:49] 2025-11-26 18:12:29,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:12:49] 2025-11-26 18:12:38,998 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:12:49] 2025-11-26 18:12:40,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111437145920)>', '<ExcThread(monitor, started 140111001929472)>']
[2025-11-26 13:12:49] 2025-11-26 18:12:45,248 | INFO     | all workflow threads have been joined
[2025-11-26 13:12:49] 2025-11-26 18:12:45,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:12:49] 2025-11-26 18:12:45,249 | INFO     | traces error code: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:45,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:12:49] 2025-11-26 18:12:49,357 | INFO     | PID=6390 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 13:12:49] 2025-11-26 18:12:49,358 | INFO     | .. there are 4 such processes running
[2025-11-26 13:12:49] 2025-11-26 18:12:49,358 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:12:49] 2025-11-26 18:12:49,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:12:49] 2025-11-26 18:12:49,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:12:49] 2025-11-26 18:12:49,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:12:49] 2025-11-26 18:12:49,359 | INFO     | [monitor] control thread has ended
[2025-11-26 13:12:49] 2025-11-26 18:12:49,464 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:12:49] 2025-11-26 18:12:49,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:12:49] 2025-11-26 18:12:49,469 [wrapper] pilotpid: 6390
[2025-11-26 13:12:49] 2025-11-26 18:12:49,471 [wrapper] Pilot exit status: 0
[2025-11-26 13:12:49] 2025-11-26 18:12:49,480 [wrapper] pandaids: 6896577489
[2025-11-26 13:12:49] 2025-11-26 18:12:49,515 [wrapper] cleanup supervisor_pilot 25198 6391
[2025-11-26 13:12:49] 2025-11-26 18:12:49,518 [wrapper] Test setup, not cleaning
[2025-11-26 13:12:49] 2025-11-26 18:12:49,520 [wrapper] apfmon messages muted
[2025-11-26 13:12:49] 2025-11-26 18:12:49,522 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:12:49] 2025-11-26 18:12:49,525 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:12:49]  *** Error codes and diagnostics ***
[2025-11-26 13:12:49]     "exeErrorCode": 0,
[2025-11-26 13:12:49]     "exeErrorDiag": "",
[2025-11-26 13:12:49]     "pilotErrorCode": 0,
[2025-11-26 13:12:49]     "pilotErrorDiag": "",
[2025-11-26 13:12:49]  *** Listing of results directory ***
[2025-11-26 13:12:49] total 1316756
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 13:12:49] -rwx------ 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas       100 Nov 25 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:12:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 19:48 run_atlas
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas       105 Nov 25 19:48 job.xml
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas 410625898 Nov 25 19:48 EVNT.47483658._002091.pool.root.1
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:48 start_atlas.sh
[2025-11-26 13:12:49] drwxrwx--x 2 boincer umatlas      4096 Nov 25 19:48 shared
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 19:48 input.tar.gz
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas         0 Nov 25 19:48 boinc_lockfile
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 19:48 pandaJob.out
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas        57 Nov 25 19:48 setup.sh.local
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas    991877 Nov 25 19:48 agis_schedconf.cvmfs.json
[2025-11-26 13:12:49] drwx------ 5 boincer umatlas      4096 Nov 25 19:48 pilot3
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas      6038 Nov 26 13:01 init_data.xml
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas       533 Nov 26 13:02 boinc_task_state.xml
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas 912224605 Nov 26 13:11 HITS.47556161._000745.pool.root.1
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas      1060 Nov 26 13:12 memory_monitor_summary.json
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas        95 Nov 26 13:12 pilot_heartbeat.json
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas   1516240 Nov 26 13:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas   2216193 Nov 26 13:12 log.47556161._000745.job.log.tgz.1
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas      8629 Nov 26 13:12 heartbeat.json
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas        29 Nov 26 13:12 wrapper_checkpoint.txt
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 13:12 boinc_mmap_file
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas       819 Nov 26 13:12 pilotlog.txt
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas   8576715 Nov 26 13:12 log.47556161._000745.job.log.1
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas       353 Nov 26 13:12 output.list
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas       620 Nov 26 13:12 runtime_log
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas  10813440 Nov 26 13:12 result.tar.gz
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas      9333 Nov 26 13:12 runtime_log.err
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas       665 Nov 26 13:12 R46NDmiW0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZLJKDm5leqIn.diag
[2025-11-26 13:12:49] -rw-r--r-- 1 boincer umatlas     21228 Nov 26 13:12 stderr.txt
[2025-11-26 13:12:49] HITS file was successfully produced:
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas 912224605 Nov 26 13:11 shared/HITS.pool.root.1
[2025-11-26 13:12:49]  *** Contents of shared directory: ***
[2025-11-26 13:12:49] total 1303016
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas 410625898 Nov 25 19:48 ATLAS.root_0
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:48 start_atlas.sh
[2025-11-26 13:12:49] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 19:48 input.tar.gz
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas 912224605 Nov 26 13:11 HITS.pool.root.1
[2025-11-26 13:12:49] -rw------- 1 boincer umatlas  10813440 Nov 26 13:12 result.tar.gz
13:12:50 (1927): run_atlas exited; CPU time 483549.630361
13:12:50 (1927): called boinc_finish(0)

</stderr_txt>
]]>

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