Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:01:01 (924128): wrapper (7.7.26015): starting
23:01:01 (924128): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:01:01] Arguments: --nthreads 8
[2025-11-25 23:01:01] Threads: 8
[2025-11-25 23:01:01] Checking for CVMFS
[2025-11-25 23:01:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:01:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:01:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:01:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:01:03] 2.13.3.0 9955 29497 294332 153307 3 115 28976847 32935937 23290 16776704 0 169536183 99.792 91953568 33012 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:01:03] CVMFS is ok
[2025-11-25 23:01:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:01:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:01:03] Further information can be found at the LHC@home message board.
[2025-11-25 23:01:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:01:03] Checking for apptainer binary...
[2025-11-25 23:01:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:01:03] Running /usr/bin/apptainer --version
[2025-11-25 23:01:03] apptainer version 1.4.4-1.el9
[2025-11-25 23:01:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:01:04] c-5-1.aglt2.org
[2025-11-25 23:01:04] apptainer works
[2025-11-25 23:01:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:01:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:01:04] Starting ATLAS job with PandaID=6895882686
[2025-11-25 23:01:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:25:46]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:25:46] 2025-11-27 06:24:49,200 | INFO     | sum of square deviations: 1168145887468.5776
[2025-11-27 01:25:46] 2025-11-27 06:24:49,299 | INFO     | sum of deviations: 5318693288577.499
[2025-11-27 01:25:46] 2025-11-27 06:24:49,300 | INFO     | mean x: 1764177221.312982
[2025-11-27 01:25:46] 2025-11-27 06:24:49,300 | INFO     | mean y: 2948586.6683804626
[2025-11-27 01:25:46] 2025-11-27 06:24:49,300 | INFO     | intersect: -8029539176.647105
[2025-11-27 01:25:46] 2025-11-27 06:24:49,302 | INFO     | chi2: 10.793944502613368
[2025-11-27 01:25:46] 2025-11-27 06:24:49,304 | INFO     | sum of square deviations: 1156921588552.0906
[2025-11-27 01:25:46] 2025-11-27 06:24:49,374 | INFO     | sum of deviations: 5855669033607.415
[2025-11-27 01:25:46] 2025-11-27 06:24:49,375 | INFO     | mean x: 1764177068.8188267
[2025-11-27 01:25:46] 2025-11-27 06:24:49,375 | INFO     | mean y: 2955881.1295938105
[2025-11-27 01:25:46] 2025-11-27 06:24:49,375 | INFO     | intersect: -8926289742.691326
[2025-11-27 01:25:46] 2025-11-27 06:24:49,377 | INFO     | chi2: 7.607943087670389
[2025-11-27 01:25:46] 2025-11-27 06:24:49,377 | INFO     | current chi2=7.607943087670389 (change=29.51656286700013 %)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,380 | INFO     | sum of square deviations: 1145769430522.997
[2025-11-27 01:25:46] 2025-11-27 06:24:49,435 | INFO     | sum of deviations: 6311357045378.426
[2025-11-27 01:25:46] 2025-11-27 06:24:49,435 | INFO     | mean x: 1764176916.324709
[2025-11-27 01:25:46] 2025-11-27 06:24:49,435 | INFO     | mean y: 2962108.15847348
[2025-11-27 01:25:46] 2025-11-27 06:24:49,435 | INFO     | intersect: -9714831117.532282
[2025-11-27 01:25:46] 2025-11-27 06:24:49,438 | INFO     | chi2: 4.992436732206014
[2025-11-27 01:25:46] 2025-11-27 06:24:49,438 | INFO     | current chi2=4.992436732206014 (change=34.37862672373465 %)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,440 | INFO     | sum of square deviations: 1134689180818.7917
[2025-11-27 01:25:46] 2025-11-27 06:24:49,512 | INFO     | sum of deviations: 6474891266199.829
[2025-11-27 01:25:46] 2025-11-27 06:24:49,512 | INFO     | mean x: 1764176763.8306293
[2025-11-27 01:25:46] 2025-11-27 06:24:49,512 | INFO     | mean y: 2964358.359506814
[2025-11-27 01:25:46] 2025-11-27 06:24:49,512 | INFO     | intersect: -10063979887.920244
[2025-11-27 01:25:46] 2025-11-27 06:24:49,515 | INFO     | chi2: 4.549513628000806
[2025-11-27 01:25:46] 2025-11-27 06:24:49,516 | INFO     | current chi2=4.549513628000806 (change=8.871882168239168 %)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,516 | INFO     | right removable region: 1540
[2025-11-27 01:25:46] 2025-11-27 06:24:49,518 | INFO     | sum of square deviations: 1156919867742.09
[2025-11-27 01:25:46] 2025-11-27 06:24:49,579 | INFO     | sum of deviations: 4733379736924.689
[2025-11-27 01:25:46] 2025-11-27 06:24:49,580 | INFO     | mean x: 1764177373.8188267
[2025-11-27 01:25:46] 2025-11-27 06:24:49,580 | INFO     | mean y: 2956536.571889104
[2025-11-27 01:25:46] 2025-11-27 06:24:49,580 | INFO     | intersect: -7214934405.064713
[2025-11-27 01:25:46] 2025-11-27 06:24:49,583 | INFO     | chi2: 7.358882083340046
[2025-11-27 01:25:46] 2025-11-27 06:24:49,583 | INFO     | current chi2=7.358882083340046 (change=31.82397703121082 %)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,586 | INFO     | sum of square deviations: 1145766272377.9385
[2025-11-27 01:25:46] 2025-11-27 06:24:49,650 | INFO     | time since job start (94981s) is within the limit (172800.0s)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,770 | INFO     | sum of deviations: 4520082919736.905
[2025-11-27 01:25:46] 2025-11-27 06:24:49,770 | INFO     | mean x: 1764177526.3227684
[2025-11-27 01:25:46] 2025-11-27 06:24:49,771 | INFO     | mean y: 2959450.2186287194
[2025-11-27 01:25:46] 2025-11-27 06:24:49,771 | INFO     | intersect: -6956774743.706831
[2025-11-27 01:25:46] 2025-11-27 06:24:49,781 | INFO     | chi2: 6.87429301964
[2025-11-27 01:25:46] 2025-11-27 06:24:49,781 | INFO     | current chi2=6.87429301964 (change=6.585090754438365 %)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,781 | INFO     | left removable region: 20
[2025-11-27 01:25:46] 2025-11-27 06:24:49,783 | INFO     | sum of square deviations: 1088927013840.7344
[2025-11-27 01:25:46] 2025-11-27 06:24:49,886 | INFO     | monitor loop #5529: job 0:6895882686 is in state 'finished'
[2025-11-27 01:25:46] 2025-11-27 06:24:49,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,927 | INFO     | sum of deviations: 5466397919336.205
[2025-11-27 01:25:46] 2025-11-27 06:24:49,927 | INFO     | mean x: 1764177343.343421
[2025-11-27 01:25:46] 2025-11-27 06:24:49,928 | INFO     | mean y: 2979222.0953947366
[2025-11-27 01:25:46] 2025-11-27 06:24:49,928 | INFO     | intersect: -8853165621.78946
[2025-11-27 01:25:46] 2025-11-27 06:24:49,930 | INFO     | chi2: 0.407760132680125
[2025-11-27 01:25:46] 2025-11-27 06:24:49,930 | INFO     | current memory leak: 5.02 B/s (using 1520 data points, chi2=0.41)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,931 | INFO     | could have reported an average CPU frequency of 2600 MHz (55 samples)
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | ..............................
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . Timing measurements:
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . get job = 0 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . initial setup = 4 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . payload setup = 23 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . stage-in = 0 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,932 | INFO     | . payload execution = 94887 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,933 | INFO     | . stage-out = 5 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,933 | INFO     | . log creation = 1 s
[2025-11-27 01:25:46] 2025-11-27 06:24:49,933 | INFO     | ..............................
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | 
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | job summary report
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | --------------------------------------------------
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | PanDA job id: 6895882686
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | task id: 47556149
[2025-11-27 01:25:46] 2025-11-27 06:24:50,180 | INFO     | errors: (none)
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | pilot state: finished 
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | transexitcode: 0
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | exeerrorcode: 0
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | exeerrordiag: 
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | exitcode: 0
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | exitmsg: OK
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | cpuconsumptiontime: 305324 s
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | nevents: 1000
[2025-11-27 01:25:46] 2025-11-27 06:24:50,181 | INFO     | neventsw: 0
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | pid: 935761
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | pgrp: 935761
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | corecount: 8
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | event service: False
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 20: 2284633, 23: 2284661, 94914: 2353007, 94920: 2362001, 94921: 2362057, 94938: 2362303}
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | --------------------------------------------------
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | 
[2025-11-27 01:25:46] 2025-11-27 06:24:50,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 01:25:46] 2025-11-27 06:24:50,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:25:46] 2025-11-27 06:24:50,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:25:46] 2025-11-27 06:24:50,263 | INFO     | job 6895882686 has completed (purged errors)
[2025-11-27 01:25:46] 2025-11-27 06:24:50,265 | INFO     | overall cleanup function is called
[2025-11-27 01:25:46] 2025-11-27 06:24:51,294 | INFO     | --- collectZombieJob: --- 10, [935761]
[2025-11-27 01:25:46] 2025-11-27 06:24:51,294 | INFO     | zombie collector waiting for pid 935761
[2025-11-27 01:25:46] 2025-11-27 06:24:51,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:25:46] 2025-11-27 06:24:51,294 | INFO     | collected zombie processes
[2025-11-27 01:25:46] 2025-11-27 06:24:51,294 | INFO     | will attempt to kill all subprocesses of pid=935761
[2025-11-27 01:25:46] 2025-11-27 06:24:52,493 | INFO     | process IDs to be killed: [935761] (in reverse order)
[2025-11-27 01:25:46] 2025-11-27 06:24:52,703 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:25:46] 2025-11-27 06:24:52,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:25:46] 2025-11-27 06:24:52,892 | INFO     | did not find any defunct processes belonging to 935761
[2025-11-27 01:25:46] 2025-11-27 06:24:52,931 | INFO     | did not find any defunct processes belonging to 935761
[2025-11-27 01:25:46] 2025-11-27 06:24:52,935 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:25:46] 2025-11-27 06:24:52,936 | INFO     | ready for new job
[2025-11-27 01:25:46] 2025-11-27 06:24:52,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:25:46] 2025-11-27 06:24:52,946 | INFO     | ***************************************
[2025-11-27 01:25:46] 2025-11-27 06:24:52,946 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:25:46] 2025-11-27 06:24:52,951 | INFO     | ***************************************
[2025-11-27 01:25:46] 2025-11-27 06:24:52,951 | INFO     | 
[2025-11-27 01:25:46] 2025-11-27 06:24:52,953 | INFO     | architecture information:
[2025-11-27 01:25:46] 2025-11-27 06:24:52,961 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:25:46] 2025-11-27 06:24:53,017 | INFO     | cat /etc/os-release:
[2025-11-27 01:25:46] NAME="CentOS Linux"
[2025-11-27 01:25:46] VERSION="7 (Core)"
[2025-11-27 01:25:46] ID="centos"
[2025-11-27 01:25:46] ID_LIKE="rhel fedora"
[2025-11-27 01:25:46] VERSION_ID="7"
[2025-11-27 01:25:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:25:46] ANSI_COLOR="0;31"
[2025-11-27 01:25:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:25:46] HOME_URL="https://www.centos.org/"
[2025-11-27 01:25:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:25:46] 
[2025-11-27 01:25:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:25:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:25:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:25:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:25:46] 
[2025-11-27 01:25:46] 2025-11-27 06:24:53,017 | INFO     | ***************************************
[2025-11-27 01:25:46] 2025-11-27 06:24:53,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 01:25:46] 2025-11-27 06:24:53,597 | INFO     | sufficient remaining disk space (72417804288 B)
[2025-11-27 01:25:46] 2025-11-27 06:24:53,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:25:46] 2025-11-27 06:24:53,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:25:46] 2025-11-27 06:24:53,598 | INFO     | update_server=False
[2025-11-27 01:25:46] 2025-11-27 06:24:53,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:25:46] 2025-11-27 06:24:53,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:25:46] 2025-11-27 06:24:53,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:25:46] 2025-11-27 06:24:53,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:25:46] 2025-11-27 06:24:53,599 | INFO     | aborting loop
[2025-11-27 01:25:46] 2025-11-27 06:24:53,950 | INFO     | all payload control threads have been joined
[2025-11-27 01:25:46] 2025-11-27 06:24:54,110 | INFO     | all job control threads have been joined
[2025-11-27 01:25:46] 2025-11-27 06:24:54,281 | INFO     | all data control threads have been joined
[2025-11-27 01:25:46] 2025-11-27 06:24:54,603 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:54,604 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:54,744 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:54,955 | INFO     | [payload] control thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:54,959 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:54,960 | INFO     | [job] validate thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,116 | INFO     | [job] control thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,130 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:25:46] 2025-11-27 06:24:55,287 | INFO     | [data] control thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,348 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,608 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,666 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:55,927 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:56,164 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:24:57,610 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:25:46] 2025-11-27 06:25:23,423 | INFO     | PID=928056 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 01:25:46] 2025-11-27 06:25:23,423 | INFO     | .. there are 40 such processes running
[2025-11-27 01:25:46] 2025-11-27 06:25:23,424 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:25:46] 2025-11-27 06:25:23,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:25:46] 2025-11-27 06:25:23,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:25:46] 2025-11-27 06:25:40,350 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:25:46] 2025-11-27 06:25:41,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816402261824)>', '<ExcThread(monitor, started 139815613888256)>']
[2025-11-27 01:25:46] 2025-11-27 06:25:41,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:25:46] 2025-11-27 06:25:41,546 | INFO     | [monitor] control thread has ended
[2025-11-27 01:25:46] 2025-11-27 06:25:46,101 | INFO     | all workflow threads have been joined
[2025-11-27 01:25:46] 2025-11-27 06:25:46,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:25:46] 2025-11-27 06:25:46,101 | INFO     | traces error code: 0
[2025-11-27 01:25:46] 2025-11-27 06:25:46,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:25:46] 2025-11-27 06:25:46,365 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:25:46] 2025-11-27 06:25:46,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:25:46] 2025-11-27 06:25:46,401 [wrapper] pilotpid: 928056
[2025-11-27 01:25:46] 2025-11-27 06:25:46,449 [wrapper] Pilot exit status: 0
[2025-11-27 01:25:46] 2025-11-27 06:25:46,480 [wrapper] pandaids: 6895882686
[2025-11-27 01:25:46] 2025-11-27 06:25:46,576 [wrapper] cleanup supervisor_pilot 3210479 928057
[2025-11-27 01:25:46] 2025-11-27 06:25:46,581 [wrapper] Test setup, not cleaning
[2025-11-27 01:25:46] 2025-11-27 06:25:46,584 [wrapper] apfmon messages muted
[2025-11-27 01:25:46] 2025-11-27 06:25:46,587 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:25:46] 2025-11-27 06:25:46,593 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:25:46]  *** Error codes and diagnostics ***
[2025-11-27 01:25:46]     "exeErrorCode": 0,
[2025-11-27 01:25:46]     "exeErrorDiag": "",
[2025-11-27 01:25:46]     "pilotErrorCode": 0,
[2025-11-27 01:25:46]     "pilotErrorDiag": "",
[2025-11-27 01:25:46]  *** Listing of results directory ***
[2025-11-27 01:25:46] total 1322992
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:37 queuedata.json
[2025-11-27 01:25:46] -rwx------. 1 boincer umatlas     36292 Nov 24 11:39 runpilot2-wrapper.sh
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:25:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:01 run_atlas
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:01 job.xml
[2025-11-27 01:25:46] -rw-r--r--. 2 boincer umatlas 411749681 Nov 25 23:01 EVNT.47483658._001387.pool.root.1
[2025-11-27 01:25:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:01 start_atlas.sh
[2025-11-27 01:25:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:01 shared
[2025-11-27 01:25:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 23:01 input.tar.gz
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:01 boinc_lockfile
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:01 pandaJob.out
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas        57 Nov 25 23:01 setup.sh.local
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas    991877 Nov 25 23:01 agis_schedconf.cvmfs.json
[2025-11-27 01:25:46] drwx------. 5 boincer umatlas      4096 Nov 25 23:01 pilot3
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas       533 Nov 27 01:06 boinc_task_state.xml
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas      6660 Nov 27 01:18 init_data.xml
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas 910498295 Nov 27 01:23 HITS.47556149._003732.pool.root.1
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas      1059 Nov 27 01:24 memory_monitor_summary.json
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas   1516240 Nov 27 01:24 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas   2532134 Nov 27 01:24 log.47556149._003732.job.log.tgz.1
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas        95 Nov 27 01:24 pilot_heartbeat.json
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas      8622 Nov 27 01:24 heartbeat.json
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 01:25 boinc_mmap_file
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas        29 Nov 27 01:25 wrapper_checkpoint.txt
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas      4823 Nov 27 01:25 pilotlog.txt
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas  11752168 Nov 27 01:25 log.47556149._003732.job.log.1
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas       353 Nov 27 01:25 output.list
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas       620 Nov 27 01:25 runtime_log
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas  14305280 Nov 27 01:25 result.tar.gz
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas      9328 Nov 27 01:25 runtime_log.err
[2025-11-27 01:25:46] -rw-------. 1 boincer umatlas       658 Nov 27 01:25 K1QODmZmoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4lLKDmvY2jPm.diag
[2025-11-27 01:25:46] -rw-r--r--. 1 boincer umatlas     21199 Nov 27 01:25 stderr.txt
[2025-11-27 01:25:47] HITS file was successfully produced:
[2025-11-27 01:25:47] -rw-------. 1 boincer umatlas 910498295 Nov 27 01:23 shared/HITS.pool.root.1
[2025-11-27 01:25:47]  *** Contents of shared directory: ***
[2025-11-27 01:25:47] total 1305836
[2025-11-27 01:25:47] -rw-r--r--. 2 boincer umatlas 411749681 Nov 25 23:01 ATLAS.root_0
[2025-11-27 01:25:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:01 start_atlas.sh
[2025-11-27 01:25:47] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 23:01 input.tar.gz
[2025-11-27 01:25:47] -rw-------. 1 boincer umatlas 910498295 Nov 27 01:23 HITS.pool.root.1
[2025-11-27 01:25:47] -rw-------. 1 boincer umatlas  14305280 Nov 27 01:25 result.tar.gz
01:25:48 (924128): run_atlas exited; CPU time 309062.937709
01:25:48 (924128): called boinc_finish(0)

</stderr_txt>
]]>

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