Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:41 (132298): wrapper (7.7.26015): starting
00:04:41 (132298): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:41] Arguments: --nthreads 9
[2025-11-26 00:04:41] Threads: 9
[2025-11-26 00:04:41] Checking for CVMFS
[2025-11-26 00:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:44] 2.13.3.0 4389 26513 198296 153309 0 164 30933889 32935937 25607 16776704 0 150993116 99.779 86515958 33595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:44] CVMFS is ok
[2025-11-26 00:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:44] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:44] Checking for apptainer binary...
[2025-11-26 00:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:44] Running /usr/bin/apptainer --version
[2025-11-26 00:04:44] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:45] c-8-24.aglt2.org
[2025-11-26 00:04:45] apptainer works
[2025-11-26 00:04:45] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:45] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:45] Starting ATLAS job with PandaID=6895350656
[2025-11-26 00:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:14:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:14:15] 2025-11-26 23:13:02,926 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:14:15] 2025-11-26 23:13:02,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:14:15] 2025-11-26 23:13:02,946 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:14:15] 2025-11-26 23:13:02,948 | INFO     | sum of square deviations: 376687773087.7377
[2025-11-26 18:14:15] 2025-11-26 23:13:02,978 | INFO     | sum of deviations: 3817852753048.219
[2025-11-26 18:14:15] 2025-11-26 23:13:02,978 | INFO     | mean x: 1764166212.0552952
[2025-11-26 18:14:15] 2025-11-26 23:13:02,979 | INFO     | mean y: 3045822.809746954
[2025-11-26 18:14:15] 2025-11-26 23:13:02,979 | INFO     | intersect: -17877350916.165833
[2025-11-26 18:14:15] 2025-11-26 23:13:02,980 | INFO     | chi2: 13.634821000802923
[2025-11-26 18:14:15] 2025-11-26 23:13:02,982 | INFO     | sum of square deviations: 371417496759.64264
[2025-11-26 18:14:15] 2025-11-26 23:13:03,013 | INFO     | sum of deviations: 4193119145304.554
[2025-11-26 18:14:15] 2025-11-26 23:13:03,014 | INFO     | mean x: 1764166059.5602636
[2025-11-26 18:14:15] 2025-11-26 23:13:03,014 | INFO     | mean y: 3056682.3116760827
[2025-11-26 18:14:15] 2025-11-26 23:13:03,014 | INFO     | intersect: -19913502296.130116
[2025-11-26 18:14:15] 2025-11-26 23:13:03,015 | INFO     | chi2: 10.584311126304424
[2025-11-26 18:14:15] 2025-11-26 23:13:03,015 | INFO     | current chi2=10.584311126304424 (change=22.372936720759746 %)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,016 | INFO     | right removable region: 1061
[2025-11-26 18:14:15] 2025-11-26 23:13:03,017 | INFO     | sum of square deviations: 371416809899.643
[2025-11-26 18:14:15] 2025-11-26 23:13:03,048 | INFO     | sum of deviations: 3363504526725.621
[2025-11-26 18:14:15] 2025-11-26 23:13:03,048 | INFO     | mean x: 1764166364.5602636
[2025-11-26 18:14:15] 2025-11-26 23:13:03,048 | INFO     | mean y: 3058966.498116761
[2025-11-26 18:14:15] 2025-11-26 23:13:03,048 | INFO     | intersect: -15973012646.143322
[2025-11-26 18:14:15] 2025-11-26 23:13:03,050 | INFO     | chi2: 9.373378299313314
[2025-11-26 18:14:15] 2025-11-26 23:13:03,050 | INFO     | current chi2=9.373378299313314 (change=31.254115482987725 %)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,051 | INFO     | sum of square deviations: 366195242986.4977
[2025-11-26 18:14:15] 2025-11-26 23:13:03,081 | INFO     | sum of deviations: 2956691262183.8706
[2025-11-26 18:14:15] 2025-11-26 23:13:03,081 | INFO     | mean x: 1764166517.065279
[2025-11-26 18:14:15] 2025-11-26 23:13:03,082 | INFO     | mean y: 3070849.3642384107
[2025-11-26 18:14:15] 2025-11-26 23:13:03,082 | INFO     | intersect: -14240958328.908266
[2025-11-26 18:14:15] 2025-11-26 23:13:03,083 | INFO     | chi2: 6.10357479744244
[2025-11-26 18:14:15] 2025-11-26 23:13:03,083 | INFO     | current chi2=6.10357479744244 (change=34.8839382926689 %)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,085 | INFO     | sum of square deviations: 361022839785.79456
[2025-11-26 18:14:15] 2025-11-26 23:13:03,113 | INFO     | sum of deviations: 2652604546924.204
[2025-11-26 18:14:15] 2025-11-26 23:13:03,114 | INFO     | mean x: 1764166669.5703423
[2025-11-26 18:14:15] 2025-11-26 23:13:03,114 | INFO     | mean y: 3079812.0579847908
[2025-11-26 18:14:15] 2025-11-26 23:13:03,114 | INFO     | intersect: -12959082171.962154
[2025-11-26 18:14:15] 2025-11-26 23:13:03,115 | INFO     | chi2: 4.403795041555333
[2025-11-26 18:14:15] 2025-11-26 23:13:03,115 | INFO     | current chi2=4.403795041555333 (change=27.848921530368724 %)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,117 | INFO     | sum of square deviations: 355899624183.6281
[2025-11-26 18:14:15] 2025-11-26 23:13:03,153 | INFO     | sum of deviations: 2528205316374.6313
[2025-11-26 18:14:15] 2025-11-26 23:13:03,153 | INFO     | mean x: 1764166822.0716333
[2025-11-26 18:14:15] 2025-11-26 23:13:03,153 | INFO     | mean y: 3083511.4049665714
[2025-11-26 18:14:15] 2025-11-26 23:13:03,153 | INFO     | intersect: -12529034073.051916
[2025-11-26 18:14:15] 2025-11-26 23:13:03,155 | INFO     | chi2: 4.148684396852028
[2025-11-26 18:14:15] 2025-11-26 23:13:03,155 | INFO     | current chi2=4.148684396852028 (change=5.792972704133958 %)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,155 | INFO     | left removable region: 40
[2025-11-26 18:14:15] 2025-11-26 23:13:03,156 | INFO     | sum of square deviations: 330039440212.57385
[2025-11-26 18:14:15] 2025-11-26 23:13:03,188 | INFO     | sum of deviations: 2667071564736.929
[2025-11-26 18:14:15] 2025-11-26 23:13:03,189 | INFO     | mean x: 1764167249.079334
[2025-11-26 18:14:15] 2025-11-26 23:13:03,189 | INFO     | mean y: 3104579.778648384
[2025-11-26 18:14:15] 2025-11-26 23:13:03,189 | INFO     | intersect: -14253253091.986687
[2025-11-26 18:14:15] 2025-11-26 23:13:03,190 | INFO     | chi2: 0.7014909154078719
[2025-11-26 18:14:15] 2025-11-26 23:13:03,190 | INFO     | current memory leak: 8.08 B/s (using 1021 data points, chi2=0.70)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,191 | INFO     | could have reported an average CPU frequency of 2600 MHz (39 samples)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | ..............................
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . Timing measurements:
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . get job = 0 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . initial setup = 5 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . payload setup = 42 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . stage-in = 0 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . payload execution = 65104 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,192 | INFO     | . stage-out = 4 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,193 | INFO     | . log creation = 1 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,193 | INFO     | ..............................
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | 
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | job summary report
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | --------------------------------------------------
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | PanDA job id: 6895350656
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | task id: 47556137
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | errors: (none)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | pilot state: finished 
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | transexitcode: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | exeerrorcode: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | exeerrordiag: 
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | exitcode: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | exitmsg: OK
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | cpuconsumptiontime: 306033 s
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | nevents: 1000
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | neventsw: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | pid: 177949
[2025-11-26 18:14:15] 2025-11-26 23:13:03,305 | INFO     | pgrp: 177949
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | corecount: 9
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | event service: False
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | sizes: {0: 2284031, 1: 2284115, 2: 2284314, 13: 2284314, 24: 2284370, 29: 2284660, 35: 2284816, 65150: 2340536, 65155: 2349586, 65162: 2349776}
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | --------------------------------------------------
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | 
[2025-11-26 18:14:15] 2025-11-26 23:13:03,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 18:14:15] 2025-11-26 23:13:03,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:14:15] 2025-11-26 23:13:03,332 | INFO     | job 6895350656 has completed (purged errors)
[2025-11-26 18:14:15] 2025-11-26 23:13:03,332 | INFO     | overall cleanup function is called
[2025-11-26 18:14:15] 2025-11-26 23:13:04,349 | INFO     | --- collectZombieJob: --- 10, [177949]
[2025-11-26 18:14:15] 2025-11-26 23:13:04,350 | INFO     | zombie collector waiting for pid 177949
[2025-11-26 18:14:15] 2025-11-26 23:13:04,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:14:15] 2025-11-26 23:13:04,350 | INFO     | collected zombie processes
[2025-11-26 18:14:15] 2025-11-26 23:13:04,350 | INFO     | will attempt to kill all subprocesses of pid=177949
[2025-11-26 18:14:15] 2025-11-26 23:13:04,817 | INFO     | process IDs to be killed: [177949] (in reverse order)
[2025-11-26 18:14:15] 2025-11-26 23:13:04,955 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:14:15] 2025-11-26 23:13:04,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:14:15] 2025-11-26 23:13:04,972 | INFO     | did not find any defunct processes belonging to 177949
[2025-11-26 18:14:15] 2025-11-26 23:13:04,988 | INFO     | did not find any defunct processes belonging to 177949
[2025-11-26 18:14:15] 2025-11-26 23:13:04,990 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:14:15] 2025-11-26 23:13:04,990 | INFO     | ready for new job
[2025-11-26 18:14:15] 2025-11-26 23:13:04,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:14:15] 2025-11-26 23:13:04,995 | INFO     | ***************************************
[2025-11-26 18:14:15] 2025-11-26 23:13:04,995 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:14:15] 2025-11-26 23:13:04,995 | INFO     | ***************************************
[2025-11-26 18:14:15] 2025-11-26 23:13:04,995 | INFO     | 
[2025-11-26 18:14:15] 2025-11-26 23:13:04,997 | INFO     | architecture information:
[2025-11-26 18:14:15] 2025-11-26 23:13:04,998 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:14:15] 2025-11-26 23:13:05,017 | INFO     | cat /etc/os-release:
[2025-11-26 18:14:15] NAME="CentOS Linux"
[2025-11-26 18:14:15] VERSION="7 (Core)"
[2025-11-26 18:14:15] ID="centos"
[2025-11-26 18:14:15] ID_LIKE="rhel fedora"
[2025-11-26 18:14:15] VERSION_ID="7"
[2025-11-26 18:14:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:14:15] ANSI_COLOR="0;31"
[2025-11-26 18:14:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:14:15] HOME_URL="https://www.centos.org/"
[2025-11-26 18:14:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:14:15] 
[2025-11-26 18:14:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:14:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:14:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:14:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:14:15] 
[2025-11-26 18:14:15] 2025-11-26 23:13:05,017 | INFO     | ***************************************
[2025-11-26 18:14:15] 2025-11-26 23:13:05,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 18:14:15] 2025-11-26 23:13:05,584 | INFO     | sufficient remaining disk space (72539439104 B)
[2025-11-26 18:14:15] 2025-11-26 23:13:05,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:14:15] 2025-11-26 23:13:05,585 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:14:15] 2025-11-26 23:13:05,585 | INFO     | update_server=False
[2025-11-26 18:14:15] 2025-11-26 23:13:05,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:14:15] 2025-11-26 23:13:05,717 | INFO     | all data control threads have been joined
[2025-11-26 18:14:15] 2025-11-26 23:13:05,871 | INFO     | all payload control threads have been joined
[2025-11-26 18:14:15] 2025-11-26 23:13:06,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:14:15] 2025-11-26 23:13:06,192 | INFO     | aborting loop
[2025-11-26 18:14:15] 2025-11-26 23:13:06,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:14:15] 2025-11-26 23:13:06,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:14:15] 2025-11-26 23:13:06,591 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:06,723 | INFO     | [data] control thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:06,877 | INFO     | [payload] control thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:06,972 | INFO     | [job] validate thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,036 | INFO     | all job control threads have been joined
[2025-11-26 18:14:15] 2025-11-26 23:13:07,142 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,178 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,184 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,206 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,269 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,661 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:07,704 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:08,044 | INFO     | [job] control thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:08,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:14:15] 2025-11-26 23:13:08,482 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:09,328 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:10,577 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:14:15] 2025-11-26 23:13:36,301 | INFO     | PID=151013 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:14:15] 2025-11-26 23:13:36,301 | INFO     | .. there are 39 such processes running
[2025-11-26 18:14:15] 2025-11-26 23:13:36,302 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:14:15] 2025-11-26 23:13:36,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:14:15] 2025-11-26 23:13:36,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:14:15] 2025-11-26 23:13:48,703 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:14:15] 2025-11-26 23:13:49,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371870312256)>', '<ExcThread(monitor, started 140371006846720)>']
[2025-11-26 18:14:15] 2025-11-26 23:13:50,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:14:15] 2025-11-26 23:13:50,383 | INFO     | [monitor] control thread has ended
[2025-11-26 18:14:15] 2025-11-26 23:13:54,454 | INFO     | all workflow threads have been joined
[2025-11-26 18:14:15] 2025-11-26 23:13:54,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:14:15] 2025-11-26 23:13:54,454 | INFO     | traces error code: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:54,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:14:15] 2025-11-26 23:13:54,803 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:14:15] 2025-11-26 23:13:54,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:14:15] 2025-11-26 23:13:54,894 [wrapper] pilotpid: 151013
[2025-11-26 18:14:15] 2025-11-26 23:13:54,928 [wrapper] Pilot exit status: 0
[2025-11-26 18:14:15] 2025-11-26 23:13:55,029 [wrapper] pandaids: 6895350656
[2025-11-26 18:14:15] 2025-11-26 23:13:55,120 [wrapper] cleanup supervisor_pilot   53416 151014
[2025-11-26 18:14:15] 2025-11-26 23:13:55,131 [wrapper] Test setup, not cleaning
[2025-11-26 18:14:15] 2025-11-26 23:13:55,133 [wrapper] apfmon messages muted
[2025-11-26 18:14:15] 2025-11-26 23:13:55,136 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:14:15] 2025-11-26 23:13:55,139 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:14:15]  *** Error codes and diagnostics ***
[2025-11-26 18:14:15]     "exeErrorCode": 0,
[2025-11-26 18:14:15]     "exeErrorDiag": "",
[2025-11-26 18:14:15]     "pilotErrorCode": 0,
[2025-11-26 18:14:15]     "pilotErrorDiag": "",
[2025-11-26 18:14:15]  *** Listing of results directory ***
[2025-11-26 18:14:15] total 1334640
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:27 pilot3.tar.gz
[2025-11-26 18:14:15] -rwx------. 1 boincer umatlas     36292 Nov 22 16:49 runpilot2-wrapper.sh
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:49 queuedata.json
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:14:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas 409347455 Nov 26 00:04 EVNT.47483658._000521.pool.root.1
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 18:14:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:04 input.tar.gz
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas      2782 Nov 26 00:04 pandaJob.out
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 18:14:15] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:01 boinc_task_state.xml
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 18:10 init_data.xml
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas 931779491 Nov 26 18:12 HITS.47556137._005161.pool.root.1
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas      1070 Nov 26 18:12 memory_monitor_summary.json
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas   2336973 Nov 26 18:12 log.47556137._005161.job.log.tgz.1
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas      8643 Nov 26 18:13 heartbeat.json
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas        95 Nov 26 18:13 pilot_heartbeat.json
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas      4823 Nov 26 18:13 pilotlog.txt
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas   8472972 Nov 26 18:13 log.47556137._005161.job.log.1
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas       353 Nov 26 18:13 output.list
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:13 runtime_log
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas  10833920 Nov 26 18:13 result.tar.gz
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 18:13 runtime_log.err
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas       662 Nov 26 18:13 R75NDm8eAh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgJIKDmGhJhhm.diag
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:14 boinc_mmap_file
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas     21141 Nov 26 18:14 stderr.txt
[2025-11-26 18:14:15] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:14 wrapper_checkpoint.txt
[2025-11-26 18:14:15] HITS file was successfully produced:
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas 931779491 Nov 26 18:12 shared/HITS.pool.root.1
[2025-11-26 18:14:15]  *** Contents of shared directory: ***
[2025-11-26 18:14:15] total 1320880
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas 409347455 Nov 26 00:04 ATLAS.root_0
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 18:14:15] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:04 input.tar.gz
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas 931779491 Nov 26 18:12 HITS.pool.root.1
[2025-11-26 18:14:15] -rw-------. 1 boincer umatlas  10833920 Nov 26 18:13 result.tar.gz
18:14:17 (132298): run_atlas exited; CPU time 308262.587259
18:14:17 (132298): called boinc_finish(0)

</stderr_txt>
]]>

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