Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:36:17 (2466458): wrapper (7.7.26015): starting
10:36:17 (2466458): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:36:17] Arguments: --nthreads 8
[2025-11-26 10:36:17] Threads: 8
[2025-11-26 10:36:17] Checking for CVMFS
[2025-11-26 10:36:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:36:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:36:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:36:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:36:18] 2.13.3.0 11600 30191 336784 153326 2 204 21313895 32935937 22234 16776704 0 120845992 99.586 124538408 38725 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:36:18] CVMFS is ok
[2025-11-26 10:36:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:36:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:36:18] Further information can be found at the LHC@home message board.
[2025-11-26 10:36:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:36:18] Checking for apptainer binary...
[2025-11-26 10:36:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:36:18] Running /usr/bin/apptainer --version
[2025-11-26 10:36:19] apptainer version 1.4.4-1.el9
[2025-11-26 10:36:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:36:19] c6-2-29-4.aglt2.org
[2025-11-26 10:36:19] apptainer works
[2025-11-26 10:36:19] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:36:19] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:36:19] Starting ATLAS job with PandaID=6896577558
[2025-11-26 10:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:09:45]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:09:45] 2025-11-27 14:08:14,458 | INFO     | time since job start (81073s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:15,543 | INFO     | monitor loop #4799: job 0:6896577558 is in state 'finished'
[2025-11-27 09:09:45] 2025-11-27 14:08:15,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:09:45] 2025-11-27 14:08:16,465 | INFO     | time since job start (81075s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:18,048 | INFO     | monitor loop #4800: job 0:6896577558 is in state 'finished'
[2025-11-27 09:09:45] 2025-11-27 14:08:18,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:09:45] 2025-11-27 14:08:18,474 | INFO     | time since job start (81077s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:20,481 | INFO     | time since job start (81079s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:20,569 | INFO     | monitor loop #4801: job 0:6896577558 is in state 'finished'
[2025-11-27 09:09:45] 2025-11-27 14:08:20,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:09:45] 2025-11-27 14:08:22,508 | INFO     | time since job start (81081s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:23,076 | INFO     | monitor loop #4802: job 0:6896577558 is in state 'finished'
[2025-11-27 09:09:45] 2025-11-27 14:08:23,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:09:45] 2025-11-27 14:08:24,515 | INFO     | time since job start (81083s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:25,581 | INFO     | monitor loop #4803: job 0:6896577558 is in state 'finished'
[2025-11-27 09:09:45] 2025-11-27 14:08:25,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:09:45] 2025-11-27 14:08:25,938 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 09:09:45] 2025-11-27 14:08:25,946 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2702.9220357142854
[2025-11-27 09:09:45] 2025-11-27 14:08:25,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896577558/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:09:45] 2025-11-27 14:08:25,956 | INFO     | extracted standard info from prmon json
[2025-11-27 09:09:45] 2025-11-27 14:08:25,956 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:09:45] 2025-11-27 14:08:25,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:09:45] 2025-11-27 14:08:25,976 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:09:45] 2025-11-27 14:08:25,979 | INFO     | sum of square deviations: 723080425202.9087
[2025-11-27 09:09:45] 2025-11-27 14:08:26,106 | INFO     | sum of deviations: 2445617068086.508
[2025-11-27 09:09:45] 2025-11-27 14:08:26,107 | INFO     | mean x: 1764211922.8544495
[2025-11-27 09:09:45] 2025-11-27 14:08:26,108 | INFO     | mean y: 2941643.9819004526
[2025-11-27 09:09:45] 2025-11-27 14:08:26,108 | INFO     | intersect: -5964011187.0863905
[2025-11-27 09:09:45] 2025-11-27 14:08:26,109 | INFO     | chi2: 21.799534272811833
[2025-11-27 09:09:45] 2025-11-27 14:08:26,115 | INFO     | sum of square deviations: 714934320238.6685
[2025-11-27 09:09:45] 2025-11-27 14:08:26,182 | INFO     | sum of deviations: 2911713542254.18
[2025-11-27 09:09:45] 2025-11-27 14:08:26,183 | INFO     | mean x: 1764211770.366389
[2025-11-27 09:09:45] 2025-11-27 14:08:26,183 | INFO     | mean y: 2950366.675246026
[2025-11-27 09:09:45] 2025-11-27 14:08:26,183 | INFO     | intersect: -7182156233.697749
[2025-11-27 09:09:45] 2025-11-27 14:08:26,190 | INFO     | chi2: 18.266711827086766
[2025-11-27 09:09:45] 2025-11-27 14:08:26,190 | INFO     | current chi2=18.266711827086766 (change=16.2059537672379 %)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,190 | INFO     | right removable region: 1320
[2025-11-27 09:09:45] 2025-11-27 14:08:26,193 | INFO     | sum of square deviations: 714931687838.9344
[2025-11-27 09:09:45] 2025-11-27 14:08:26,275 | INFO     | sum of deviations: 1944382192450.736
[2025-11-27 09:09:45] 2025-11-27 14:08:26,276 | INFO     | mean x: 1764212075.367146
[2025-11-27 09:09:45] 2025-11-27 14:08:26,279 | INFO     | mean y: 2951023.4087812263
[2025-11-27 09:09:45] 2025-11-27 14:08:26,279 | INFO     | intersect: -4795133327.026726
[2025-11-27 09:09:45] 2025-11-27 14:08:26,282 | INFO     | chi2: 18.385450620636703
[2025-11-27 09:09:45] 2025-11-27 14:08:26,282 | INFO     | current chi2=18.385450620636703 (change=15.661268765879743 %)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,282 | INFO     | left removable region: 10
[2025-11-27 09:09:45] 2025-11-27 14:08:26,288 | INFO     | sum of square deviations: 697223753273.0386
[2025-11-27 09:09:45] 2025-11-27 14:08:26,357 | INFO     | sum of deviations: 2244462908689.454
[2025-11-27 09:09:45] 2025-11-27 14:08:26,358 | INFO     | mean x: 1764212044.8931298
[2025-11-27 09:09:45] 2025-11-27 14:08:26,358 | INFO     | mean y: 2966108.217557252
[2025-11-27 09:09:45] 2025-11-27 14:08:26,358 | INFO     | intersect: -5676284604.681132
[2025-11-27 09:09:45] 2025-11-27 14:08:26,359 | INFO     | chi2: 13.412973317678212
[2025-11-27 09:09:45] 2025-11-27 14:08:26,360 | INFO     | current memory leak: 3.22 B/s (using 1310 data points, chi2=13.41)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,365 | INFO     | could have reported an average CPU frequency of 2858 MHz (48 samples)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | ..............................
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . Timing measurements:
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . get job = 0 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . initial setup = 4 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . payload setup = 23 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . stage-in = 0 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . payload execution = 80903 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . stage-out = 60 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | . log creation = 4 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,366 | INFO     | ..............................
[2025-11-27 09:09:45] 2025-11-27 14:08:26,535 | INFO     | time since job start (81085s) is within the limit (172800.0s)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,571 | INFO     | 
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | job summary report
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | --------------------------------------------------
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | PanDA job id: 6896577558
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | task id: 47556161
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | errors: (none)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | pilot state: finished 
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | transexitcode: 0
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | exeerrorcode: 0
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | exeerrordiag: 
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | exitcode: 0
[2025-11-27 09:09:45] 2025-11-27 14:08:26,572 | INFO     | exitmsg: OK
[2025-11-27 09:09:45] 2025-11-27 14:08:26,573 | INFO     | cpuconsumptiontime: 251068 s
[2025-11-27 09:09:45] 2025-11-27 14:08:26,573 | INFO     | nevents: 1000
[2025-11-27 09:09:45] 2025-11-27 14:08:26,573 | INFO     | neventsw: 0
[2025-11-27 09:09:45] 2025-11-27 14:08:26,573 | INFO     | pid: 2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:26,575 | INFO     | pgrp: 2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:26,575 | INFO     | corecount: 8
[2025-11-27 09:09:45] 2025-11-27 14:08:26,575 | INFO     | event service: False
[2025-11-27 09:09:45] 2025-11-27 14:08:26,575 | INFO     | sizes: {0: 2284091, 1: 2284290, 2: 2284290, 12: 2284318, 21: 2284608, 23: 2284636, 80928: 2347430, 80930: 2347429, 80992: 2356725, 80994: 2356781, 81044: 2356805}
[2025-11-27 09:09:45] 2025-11-27 14:08:26,575 | INFO     | --------------------------------------------------
[2025-11-27 09:09:45] 2025-11-27 14:08:26,576 | INFO     | 
[2025-11-27 09:09:45] 2025-11-27 14:08:26,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 09:09:45] 2025-11-27 14:08:26,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:09:45] 2025-11-27 14:08:26,772 | INFO     | job 6896577558 has completed (purged errors)
[2025-11-27 09:09:45] 2025-11-27 14:08:26,772 | INFO     | overall cleanup function is called
[2025-11-27 09:09:45] 2025-11-27 14:08:27,824 | INFO     | --- collectZombieJob: --- 10, [2480354]
[2025-11-27 09:09:45] 2025-11-27 14:08:27,824 | INFO     | zombie collector waiting for pid 2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:27,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:09:45] 2025-11-27 14:08:27,824 | INFO     | collected zombie processes
[2025-11-27 09:09:45] 2025-11-27 14:08:27,825 | INFO     | will attempt to kill all subprocesses of pid=2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:30,035 | INFO     | process IDs to be killed: [2480354] (in reverse order)
[2025-11-27 09:09:45] 2025-11-27 14:08:30,457 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:09:45] 2025-11-27 14:08:30,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:09:45] 2025-11-27 14:08:30,489 | INFO     | did not find any defunct processes belonging to 2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:30,521 | INFO     | did not find any defunct processes belonging to 2480354
[2025-11-27 09:09:45] 2025-11-27 14:08:30,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:09:45] 2025-11-27 14:08:30,526 | INFO     | ready for new job
[2025-11-27 09:09:45] 2025-11-27 14:08:30,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:09:45] 2025-11-27 14:08:30,548 | INFO     | ***************************************
[2025-11-27 09:09:45] 2025-11-27 14:08:30,549 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:09:45] 2025-11-27 14:08:30,549 | INFO     | ***************************************
[2025-11-27 09:09:45] 2025-11-27 14:08:30,549 | INFO     | 
[2025-11-27 09:09:45] 2025-11-27 14:08:30,560 | INFO     | architecture information:
[2025-11-27 09:09:45] 2025-11-27 14:08:30,561 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:09:45] 2025-11-27 14:08:30,635 | INFO     | cat /etc/os-release:
[2025-11-27 09:09:45] NAME="CentOS Linux"
[2025-11-27 09:09:45] VERSION="7 (Core)"
[2025-11-27 09:09:45] ID="centos"
[2025-11-27 09:09:45] ID_LIKE="rhel fedora"
[2025-11-27 09:09:45] VERSION_ID="7"
[2025-11-27 09:09:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:09:45] ANSI_COLOR="0;31"
[2025-11-27 09:09:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:09:45] HOME_URL="https://www.centos.org/"
[2025-11-27 09:09:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:09:45] 
[2025-11-27 09:09:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:09:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:09:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:09:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:09:45] 
[2025-11-27 09:09:45] 2025-11-27 14:08:30,636 | INFO     | ***************************************
[2025-11-27 09:09:45] 2025-11-27 14:08:31,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 09:09:45] 2025-11-27 14:08:31,226 | INFO     | sufficient remaining disk space (68436361216 B)
[2025-11-27 09:09:45] 2025-11-27 14:08:31,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:09:45] 2025-11-27 14:08:31,227 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:09:45] 2025-11-27 14:08:31,227 | INFO     | update_server=False
[2025-11-27 09:09:45] 2025-11-27 14:08:31,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:09:45] 2025-11-27 14:08:31,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:09:45] 2025-11-27 14:08:31,228 | INFO     | all payload control threads have been joined
[2025-11-27 09:09:45] 2025-11-27 14:08:31,497 | INFO     | all data control threads have been joined
[2025-11-27 09:09:45] 2025-11-27 14:08:31,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:09:45] 2025-11-27 14:08:31,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:09:45] 2025-11-27 14:08:31,790 | INFO     | aborting loop
[2025-11-27 09:09:45] 2025-11-27 14:08:31,811 | INFO     | all job control threads have been joined
[2025-11-27 09:09:45] 2025-11-27 14:08:32,233 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,241 | INFO     | [payload] control thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,247 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:09:45] 2025-11-27 14:08:32,393 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,400 | INFO     | [job] validate thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,452 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,510 | INFO     | [data] control thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,550 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,616 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,649 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,809 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:32,817 | INFO     | [job] control thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:33,170 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:33,239 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:08:36,419 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:09:45] 2025-11-27 14:09:10,917 | INFO     | PID=2473172 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:09:45] 2025-11-27 14:09:10,918 | INFO     | .. there are 34 such processes running
[2025-11-27 09:09:45] 2025-11-27 14:09:10,918 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:09:45] 2025-11-27 14:09:10,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:09:45] 2025-11-27 14:09:10,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:09:45] 2025-11-27 14:09:31,156 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:09:45] 2025-11-27 14:09:31,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428398176064)>', '<ExcThread(monitor, started 140427898377984)>']
[2025-11-27 09:09:45] 2025-11-27 14:09:32,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:09:45] 2025-11-27 14:09:32,269 | INFO     | [monitor] control thread has ended
[2025-11-27 09:09:45] 2025-11-27 14:09:36,756 | INFO     | all workflow threads have been joined
[2025-11-27 09:09:45] 2025-11-27 14:09:36,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:09:45] 2025-11-27 14:09:36,756 | INFO     | traces error code: 0
[2025-11-27 09:09:45] 2025-11-27 14:09:36,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:09:45] 2025-11-27 14:09:42,241 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:09:45] 2025-11-27 14:09:42,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:09:45] 2025-11-27 14:09:42,311 [wrapper] pilotpid: 2473172
[2025-11-27 09:09:45] 2025-11-27 14:09:42,447 [wrapper] Pilot exit status: 0
[2025-11-27 09:09:45] 2025-11-27 14:09:42,713 [wrapper] pandaids: 6896577558
[2025-11-27 09:09:45] 2025-11-27 14:09:44,251 [wrapper] cleanup supervisor_pilot 3176755 2473173
[2025-11-27 09:09:45] 2025-11-27 14:09:44,265 [wrapper] Test setup, not cleaning
[2025-11-27 09:09:45] 2025-11-27 14:09:44,297 [wrapper] apfmon messages muted
[2025-11-27 09:09:45] 2025-11-27 14:09:44,340 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:09:45] 2025-11-27 14:09:44,368 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:09:45]  *** Error codes and diagnostics ***
[2025-11-27 09:09:45]     "exeErrorCode": 0,
[2025-11-27 09:09:45]     "exeErrorDiag": "",
[2025-11-27 09:09:45]     "pilotErrorCode": 0,
[2025-11-27 09:09:45]     "pilotErrorDiag": "",
[2025-11-27 09:09:45]  *** Listing of results directory ***
[2025-11-27 09:09:45] total 1316580
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-27 09:09:45] -rwx------. 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:09:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:36 run_atlas
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:36 job.xml
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas 409281486 Nov 26 10:36 EVNT.47483658._002095.pool.root.1
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:36 start_atlas.sh
[2025-11-27 09:09:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:36 shared
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 10:36 input.tar.gz
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:36 boinc_lockfile
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 10:36 pandaJob.out
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas        57 Nov 26 10:36 setup.sh.local
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas    991855 Nov 26 10:36 agis_schedconf.cvmfs.json
[2025-11-27 09:09:45] drwx------. 5 boincer umatlas      4096 Nov 26 10:37 pilot3
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas       533 Nov 27 08:37 boinc_task_state.xml
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas 909963602 Nov 27 09:03 HITS.47556161._000789.pool.root.1
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 09:03 init_data.xml
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas      1065 Nov 27 09:06 memory_monitor_summary.json
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas   2381413 Nov 27 09:07 log.47556161._000789.job.log.tgz.1
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas        95 Nov 27 09:08 pilot_heartbeat.json
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas      8644 Nov 27 09:08 heartbeat.json
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas      4824 Nov 27 09:09 pilotlog.txt
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:09 boinc_mmap_file
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:09 wrapper_checkpoint.txt
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas  10124446 Nov 27 09:09 log.47556161._000789.job.log.1
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas       353 Nov 27 09:09 output.list
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:09 runtime_log
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas  12523520 Nov 27 09:09 result.tar.gz
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 09:09 runtime_log.err
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas       662 Nov 27 09:09 4pDMDmhW0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq8LKDms76ypn.diag
[2025-11-27 09:09:45] -rw-r--r--. 1 boincer umatlas     21817 Nov 27 09:09 stderr.txt
[2025-11-27 09:09:45] HITS file was successfully produced:
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas 909963602 Nov 27 09:03 shared/HITS.pool.root.1
[2025-11-27 09:09:45]  *** Contents of shared directory: ***
[2025-11-27 09:09:45] total 1301164
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas 409281486 Nov 26 10:36 ATLAS.root_0
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:36 start_atlas.sh
[2025-11-27 09:09:45] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 10:36 input.tar.gz
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas 909963602 Nov 27 09:03 HITS.pool.root.1
[2025-11-27 09:09:45] -rw-------. 1 boincer umatlas  12523520 Nov 27 09:09 result.tar.gz
09:09:47 (2466458): run_atlas exited; CPU time 253155.941404
09:09:47 (2466458): called boinc_finish(0)

</stderr_txt>
]]>

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