Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:22:18 (1339065): wrapper (7.7.26015): starting
19:22:18 (1339065): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:22:18] Arguments: --nthreads 9
[2025-11-25 19:22:18] Threads: 9
[2025-11-25 19:22:18] Checking for CVMFS
[2025-11-25 19:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:22:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:22:19] 2.13.3.0 11561 27627 149404 153303 2 81 23897644 32935936 23795 16776704 0 159468206 99.793 81639132 32136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:22:19] CVMFS is ok
[2025-11-25 19:22:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:22:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:22:19] Further information can be found at the LHC@home message board.
[2025-11-25 19:22:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:22:19] Checking for apptainer binary...
[2025-11-25 19:22:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:22:19] Running /usr/bin/apptainer --version
[2025-11-25 19:22:19] apptainer version 1.4.4-1.el9
[2025-11-25 19:22:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:22:20] c-8-14.aglt2.org
[2025-11-25 19:22:20] apptainer works
[2025-11-25 19:22:20] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:22:20] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:22:20] Starting ATLAS job with PandaID=6896558440
[2025-11-25 19:22:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:37:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:37:21] 2025-11-26 17:19:25,263 | INFO     | sum of square deviations: 309168002268.42847
[2025-11-26 12:37:21] 2025-11-26 17:19:25,289 | INFO     | sum of deviations: 2021443881931.619
[2025-11-26 12:37:21] 2025-11-26 17:19:25,290 | INFO     | mean x: 1764147052.2182183
[2025-11-26 12:37:21] 2025-11-26 17:19:25,290 | INFO     | mean y: 3093198.932932933
[2025-11-26 12:37:21] 2025-11-26 17:19:25,290 | INFO     | intersect: -11531490714.566648
[2025-11-26 12:37:21] 2025-11-26 17:19:25,292 | INFO     | chi2: 8.94926940918134
[2025-11-26 12:37:21] 2025-11-26 17:19:25,293 | INFO     | sum of square deviations: 304549921756.20184
[2025-11-26 12:37:21] 2025-11-26 17:19:25,319 | INFO     | sum of deviations: 2386346067737.997
[2025-11-26 12:37:21] 2025-11-26 17:19:25,319 | INFO     | mean x: 1764146899.7293763
[2025-11-26 12:37:21] 2025-11-26 17:19:25,319 | INFO     | mean y: 3105246.9144869214
[2025-11-26 12:37:21] 2025-11-26 17:19:25,320 | INFO     | intersect: -13820129357.136583
[2025-11-26 12:37:21] 2025-11-26 17:19:25,321 | INFO     | chi2: 5.6948713002653
[2025-11-26 12:37:21] 2025-11-26 17:19:25,321 | INFO     | current chi2=5.6948713002653 (change=36.36495852474002 %)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,322 | INFO     | sum of square deviations: 299978074668.726
[2025-11-26 12:37:21] 2025-11-26 17:19:25,348 | INFO     | sum of deviations: 2659574575949.004
[2025-11-26 12:37:21] 2025-11-26 17:19:25,349 | INFO     | mean x: 1764146747.240647
[2025-11-26 12:37:21] 2025-11-26 17:19:25,349 | INFO     | mean y: 3114352.298281092
[2025-11-26 12:37:21] 2025-11-26 17:19:25,349 | INFO     | intersect: -15637628199.922342
[2025-11-26 12:37:21] 2025-11-26 17:19:25,350 | INFO     | chi2: 3.6170857564866403
[2025-11-26 12:37:21] 2025-11-26 17:19:25,351 | INFO     | current chi2=3.6170857564866403 (change=36.485206323834994 %)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,352 | INFO     | sum of square deviations: 295451806158.9746
[2025-11-26 12:37:21] 2025-11-26 17:19:25,377 | INFO     | sum of deviations: 2735330659583.0073
[2025-11-26 12:37:21] 2025-11-26 17:19:25,377 | INFO     | mean x: 1764146594.7449186
[2025-11-26 12:37:21] 2025-11-26 17:19:25,378 | INFO     | mean y: 3116899.5020325202
[2025-11-26 12:37:21] 2025-11-26 17:19:25,378 | INFO     | intersect: -16329578206.813381
[2025-11-26 12:37:21] 2025-11-26 17:19:25,379 | INFO     | chi2: 3.3059783069945445
[2025-11-26 12:37:21] 2025-11-26 17:19:25,379 | INFO     | current chi2=3.3059783069945445 (change=8.601052627358266 %)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,379 | INFO     | right removable region: 983
[2025-11-26 12:37:21] 2025-11-26 17:19:25,381 | INFO     | sum of square deviations: 304548569996.202
[2025-11-26 12:37:21] 2025-11-26 17:19:25,460 | INFO     | sum of deviations: 1656338325323.5059
[2025-11-26 12:37:21] 2025-11-26 17:19:25,460 | INFO     | mean x: 1764147204.7293763
[2025-11-26 12:37:21] 2025-11-26 17:19:25,460 | INFO     | mean y: 3105246.3661971833
[2025-11-26 12:37:21] 2025-11-26 17:19:25,461 | INFO     | intersect: -9591504331.810575
[2025-11-26 12:37:21] 2025-11-26 17:19:25,462 | INFO     | chi2: 5.963536782787003
[2025-11-26 12:37:21] 2025-11-26 17:19:25,462 | INFO     | current chi2=5.963536782787003 (change=33.36286449630379 %)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,476 | INFO     | sum of square deviations: 299975674336.1071
[2025-11-26 12:37:21] 2025-11-26 17:19:25,491 | INFO     | monitor loop #3608: job 0:6896558440 is in state 'finished'
[2025-11-26 12:37:21] 2025-11-26 17:19:25,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,568 | INFO     | sum of deviations: 1569389414373.0
[2025-11-26 12:37:21] 2025-11-26 17:19:25,568 | INFO     | mean x: 1764147357.2355914
[2025-11-26 12:37:21] 2025-11-26 17:19:25,568 | INFO     | mean y: 3108145.403437816
[2025-11-26 12:37:21] 2025-11-26 17:19:25,568 | INFO     | intersect: -9226420862.130453
[2025-11-26 12:37:21] 2025-11-26 17:19:25,582 | INFO     | chi2: 5.87965627456522
[2025-11-26 12:37:21] 2025-11-26 17:19:25,582 | INFO     | current chi2=5.87965627456522 (change=1.4065563989458927 %)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,582 | INFO     | left removable region: 20
[2025-11-26 12:37:21] 2025-11-26 17:19:25,584 | INFO     | sum of square deviations: 276935829939.6254
[2025-11-26 12:37:21] 2025-11-26 17:19:25,688 | INFO     | sum of deviations: 2170665605864.714
[2025-11-26 12:37:21] 2025-11-26 17:19:25,689 | INFO     | mean x: 1764147174.2741432
[2025-11-26 12:37:21] 2025-11-26 17:19:25,689 | INFO     | mean y: 3136289.743509865
[2025-11-26 12:37:21] 2025-11-26 17:19:25,689 | INFO     | intersect: -13824520448.336014
[2025-11-26 12:37:21] 2025-11-26 17:19:25,703 | INFO     | chi2: 0.15810687034697565
[2025-11-26 12:37:21] 2025-11-26 17:19:25,703 | INFO     | current memory leak: 7.84 B/s (using 963 data points, chi2=0.16)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,704 | INFO     | could have reported an average CPU frequency of 2600 MHz (37 samples)
[2025-11-26 12:37:21] 2025-11-26 17:19:25,704 | INFO     | ..............................
[2025-11-26 12:37:21] 2025-11-26 17:19:25,704 | INFO     | . Timing measurements:
[2025-11-26 12:37:21] 2025-11-26 17:19:25,704 | INFO     | . get job = 0 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . initial setup = 3 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . payload setup = 13 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . stage-in = 0 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . payload execution = 60938 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . stage-out = 6 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | . log creation = 1 s
[2025-11-26 12:37:21] 2025-11-26 17:19:25,705 | INFO     | ..............................
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | 
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | job summary report
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | --------------------------------------------------
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | PanDA job id: 6896558440
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | task id: 47556161
[2025-11-26 12:37:21] 2025-11-26 17:19:26,361 | INFO     | errors: (none)
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | pilot state: finished 
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | transexitcode: 0
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | exeerrorcode: 0
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | exeerrordiag: 
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | exitcode: 0
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | exitmsg: OK
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | cpuconsumptiontime: 294770 s
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | nevents: 1000
[2025-11-26 12:37:21] 2025-11-26 17:19:26,362 | INFO     | neventsw: 0
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | pid: 1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | pgrp: 1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | corecount: 9
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | event service: False
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | sizes: {0: 2284085, 1: 2284284, 9: 2284546, 12: 2284574, 60955: 2337235, 60956: 2337234, 60963: 2346412, 60966: 2346468, 60979: 2346714}
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | --------------------------------------------------
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | 
[2025-11-26 12:37:21] 2025-11-26 17:19:26,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 12:37:21] 2025-11-26 17:19:26,406 | INFO     | time since job start (61000s) is within the limit (172800.0s)
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | job 6896558440 has completed (purged errors)
[2025-11-26 12:37:21] 2025-11-26 17:19:26,418 | INFO     | overall cleanup function is called
[2025-11-26 12:37:21] 2025-11-26 17:19:27,449 | INFO     | --- collectZombieJob: --- 10, [1351389]
[2025-11-26 12:37:21] 2025-11-26 17:19:27,449 | INFO     | zombie collector waiting for pid 1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:27,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:37:21] 2025-11-26 17:19:27,449 | INFO     | collected zombie processes
[2025-11-26 12:37:21] 2025-11-26 17:19:27,449 | INFO     | will attempt to kill all subprocesses of pid=1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:28,437 | INFO     | process IDs to be killed: [1351389] (in reverse order)
[2025-11-26 12:37:21] 2025-11-26 17:19:28,649 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:37:21] 2025-11-26 17:19:28,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:37:21] 2025-11-26 17:19:28,736 | INFO     | did not find any defunct processes belonging to 1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:28,775 | INFO     | did not find any defunct processes belonging to 1351389
[2025-11-26 12:37:21] 2025-11-26 17:19:28,781 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:37:21] 2025-11-26 17:19:28,781 | INFO     | ready for new job
[2025-11-26 12:37:21] 2025-11-26 17:19:28,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:37:21] 2025-11-26 17:19:28,789 | INFO     | ***************************************
[2025-11-26 12:37:21] 2025-11-26 17:19:28,790 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:37:21] 2025-11-26 17:19:28,790 | INFO     | ***************************************
[2025-11-26 12:37:21] 2025-11-26 17:19:28,790 | INFO     | 
[2025-11-26 12:37:21] 2025-11-26 17:19:28,792 | INFO     | architecture information:
[2025-11-26 12:37:21] 2025-11-26 17:19:28,796 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:37:21] 2025-11-26 17:19:28,839 | INFO     | cat /etc/os-release:
[2025-11-26 12:37:21] NAME="CentOS Linux"
[2025-11-26 12:37:21] VERSION="7 (Core)"
[2025-11-26 12:37:21] ID="centos"
[2025-11-26 12:37:21] ID_LIKE="rhel fedora"
[2025-11-26 12:37:21] VERSION_ID="7"
[2025-11-26 12:37:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:37:21] ANSI_COLOR="0;31"
[2025-11-26 12:37:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:37:21] HOME_URL="https://www.centos.org/"
[2025-11-26 12:37:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:37:21] 
[2025-11-26 12:37:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:37:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:37:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:37:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:37:21] 
[2025-11-26 12:37:21] 2025-11-26 17:19:28,840 | INFO     | ***************************************
[2025-11-26 12:37:21] 2025-11-26 17:19:29,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 12:37:21] 2025-11-26 17:19:29,526 | INFO     | sufficient remaining disk space (69761761280 B)
[2025-11-26 12:37:21] 2025-11-26 17:19:29,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:37:21] 2025-11-26 17:19:29,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:37:21] 2025-11-26 17:19:29,527 | INFO     | update_server=False
[2025-11-26 12:37:21] 2025-11-26 17:19:29,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:37:21] 2025-11-26 17:19:29,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:37:21] 2025-11-26 17:19:29,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:37:21] 2025-11-26 17:19:29,528 | INFO     | aborting loop
[2025-11-26 12:37:21] 2025-11-26 17:19:29,662 | INFO     | all data control threads have been joined
[2025-11-26 12:37:21] 2025-11-26 17:19:29,909 | INFO     | all payload control threads have been joined
[2025-11-26 12:37:21] 2025-11-26 17:19:30,528 | INFO     | all job control threads have been joined
[2025-11-26 12:37:21] 2025-11-26 17:19:30,533 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,533 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,672 | INFO     | [data] control thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,697 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,817 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,837 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,899 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:30,915 | INFO     | [payload] control thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:31,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:37:21] 2025-11-26 17:19:31,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:31,534 | INFO     | [job] control thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:31,535 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:32,020 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:32,021 | INFO     | [job] validate thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:32,136 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:32,302 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:32,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:37:21] 2025-11-26 17:19:36,093 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:37:21] 2025-11-26 17:19:36,816 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:37:21] 2025-11-26 17:19:38,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354841950016)>', '<ExcThread(monitor, started 140354355455744)>']
[2025-11-26 12:37:21] 2025-11-26 17:19:43,797 | INFO     | all workflow threads have been joined
[2025-11-26 12:37:21] 2025-11-26 17:19:43,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:37:21] 2025-11-26 17:19:43,797 | INFO     | traces error code: 0
[2025-11-26 12:37:21] 2025-11-26 17:19:43,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:37:21] 2025-11-26 17:20:00,157 | INFO     | PID=1343148 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | INFO     | .. there are 43 such processes running
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:37:21] 2025-11-26 17:20:00,158 | INFO     | [monitor] control thread has ended
[2025-11-26 12:37:21] 2025-11-26 17:20:00,519 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:37:21] 2025-11-26 17:20:00,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:37:21] 2025-11-26 17:20:00,532 [wrapper] pilotpid: 1343148
[2025-11-26 12:37:21] 2025-11-26 17:20:00,534 [wrapper] Pilot exit status: 0
[2025-11-26 12:37:21] 2025-11-26 17:20:00,573 [wrapper] pandaids: 6896558440
[2025-11-26 12:37:21] 2025-11-26 17:20:00,702 [wrapper] cleanup supervisor_pilot  692007 1343149
[2025-11-26 12:37:21] 2025-11-26 17:20:00,707 [wrapper] Test setup, not cleaning
[2025-11-26 12:37:21] 2025-11-26 17:20:00,720 [wrapper] apfmon messages muted
[2025-11-26 12:37:21] 2025-11-26 17:20:00,724 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:37:21] 2025-11-26 17:20:00,727 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:37:21]  *** Error codes and diagnostics ***
[2025-11-26 12:37:21]     "exeErrorCode": 0,
[2025-11-26 12:37:21]     "exeErrorDiag": "",
[2025-11-26 12:37:21]     "pilotErrorCode": 0,
[2025-11-26 12:37:21]     "pilotErrorDiag": "",
[2025-11-26 12:37:21]  *** Listing of results directory ***
[2025-11-26 12:37:21] total 1321052
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 12:37:21] -rwx------. 1 boincer umatlas     36292 Nov 25 00:05 runpilot2-wrapper.sh
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:05 queuedata.json
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:37:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:22 run_atlas
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:22 job.xml
[2025-11-26 12:37:21] -rw-r--r--. 2 boincer umatlas 410999430 Nov 25 19:22 EVNT.47483658._002089.pool.root.1
[2025-11-26 12:37:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:22 start_atlas.sh
[2025-11-26 12:37:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:22 shared
[2025-11-26 12:37:21] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:22 input.tar.gz
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:22 boinc_lockfile
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 19:22 pandaJob.out
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas        57 Nov 25 19:22 setup.sh.local
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas    991877 Nov 25 19:22 agis_schedconf.cvmfs.json
[2025-11-26 12:37:21] drwx------. 5 boincer umatlas      4096 Nov 25 19:22 pilot3
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas       533 Nov 26 12:02 boinc_task_state.xml
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas 918046475 Nov 26 12:17 HITS.47556161._000721.pool.root.1
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas      1064 Nov 26 12:18 memory_monitor_summary.json
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas   2253262 Nov 26 12:19 log.47556161._000721.job.log.tgz.1
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas        95 Nov 26 12:19 pilot_heartbeat.json
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas      8616 Nov 26 12:19 heartbeat.json
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas       823 Nov 26 12:20 pilotlog.txt
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas   7643483 Nov 26 12:20 log.47556161._000721.job.log.1
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas       353 Nov 26 12:20 output.list
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:20 runtime_log
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas   9912320 Nov 26 12:20 result.tar.gz
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 12:20 runtime_log.err
[2025-11-26 12:37:21] -rw-------. 1 boincer umatlas       658 Nov 26 12:20 eYFKDmdQ0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwKJKDmxtKVym.diag
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 12:37 init_data.xml
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:37 boinc_mmap_file
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:37 wrapper_checkpoint.txt
[2025-11-26 12:37:21] -rw-r--r--. 1 boincer umatlas     21223 Nov 26 12:37 stderr.txt
[2025-11-26 12:37:22] HITS file was successfully produced:
[2025-11-26 12:37:22] -rw-------. 1 boincer umatlas 918046475 Nov 26 12:17 shared/HITS.pool.root.1
[2025-11-26 12:37:22]  *** Contents of shared directory: ***
[2025-11-26 12:37:22] total 1308184
[2025-11-26 12:37:22] -rw-r--r--. 2 boincer umatlas 410999430 Nov 25 19:22 ATLAS.root_0
[2025-11-26 12:37:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:22 start_atlas.sh
[2025-11-26 12:37:22] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:22 input.tar.gz
[2025-11-26 12:37:22] -rw-------. 1 boincer umatlas 918046475 Nov 26 12:17 HITS.pool.root.1
[2025-11-26 12:37:22] -rw-------. 1 boincer umatlas   9912320 Nov 26 12:20 result.tar.gz
12:37:23 (1339065): run_atlas exited; CPU time 296668.269796
12:37:23 (1339065): called boinc_finish(0)

</stderr_txt>
]]>

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