Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:12:26 (392497): wrapper (7.7.26015): starting
18:12:26 (392497): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 18:12:26] Arguments: --nthreads 12
[2025-11-25 18:12:26] Threads: 12
[2025-11-25 18:12:26] Checking for CVMFS
[2025-11-25 18:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:12:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:12:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:12:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:12:32] 2.13.3.0 392733 0 29644 153302 3 1 5569995 6144001 0 130560 0 0 0.000 1292 582 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 18:12:32] CVMFS is ok
[2025-11-25 18:12:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:12:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 18:12:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 18:12:32] Further information can be found at the LHC@home message board.
[2025-11-25 18:12:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:12:32] Checking for apptainer binary...
[2025-11-25 18:12:32] apptainer is not installed, using version from CVMFS
[2025-11-25 18:12:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:12:33] ace
[2025-11-25 18:12:33] apptainer works
[2025-11-25 18:12:33] Set ATHENA_PROC_NUMBER=12
[2025-11-25 18:12:33] Set ATHENA_CORE_NUMBER=12
[2025-11-25 18:12:33] Starting ATLAS job with PandaID=6896557296
[2025-11-25 18:12:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:52:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:52:48] 2025-11-26 06:52:12,922 | INFO     | monitor loop #1774: job 0:6896557296 is in state 'finished'
[2025-11-26 00:52:48] 2025-11-26 06:52:12,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:52:48] 2025-11-26 06:52:13,252 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | job 6896557296 has state=finished
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | preparing for final server update for job 6896557296 in state='finished'
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | this job has now completed (state=finished)
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | log transfer has been attempted: DONE
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | job 6896557296 has finished - writing final server update
[2025-11-26 00:52:48] 2025-11-26 06:52:13,253 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 00:52:48] 2025-11-26 06:52:13,254 | INFO     | executing command: lscpu
[2025-11-26 00:52:48] 2025-11-26 06:52:13,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 00:52:48] 2025-11-26 06:52:13,453 | INFO     | time since job start (23961s) is within the limit (172800.0s)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,425 | INFO     | monitor loop #1775: job 0:6896557296 is in state 'finished'
[2025-11-26 00:52:48] 2025-11-26 06:52:15,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,458 | INFO     | time since job start (23963s) is within the limit (172800.0s)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,784 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:52:48] 2025-11-26 06:52:15,786 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2504.7705625000003
[2025-11-26 00:52:48] 2025-11-26 06:52:15,788 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6896557296/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,788 | INFO     | extracted standard info from prmon json
[2025-11-26 00:52:48] 2025-11-26 06:52:15,788 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:52:48] 2025-11-26 06:52:15,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:52:48] 2025-11-26 06:52:15,792 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:52:48] 2025-11-26 06:52:15,792 | INFO     | sum of square deviations: 18821341512.69208
[2025-11-26 00:52:48] 2025-11-26 06:52:15,794 | INFO     | sum of deviations: 2963674668998.4727
[2025-11-26 00:52:48] 2025-11-26 06:52:15,794 | INFO     | mean x: 1764127950.9720101
[2025-11-26 00:52:48] 2025-11-26 06:52:15,794 | INFO     | mean y: 4113310.3155216286
[2025-11-26 00:52:48] 2025-11-26 06:52:15,794 | INFO     | intersect: -277781682013.69183
[2025-11-26 00:52:48] 2025-11-26 06:52:15,794 | INFO     | chi2: 35.14437214851017
[2025-11-26 00:52:48] 2025-11-26 06:52:15,795 | INFO     | sum of square deviations: 18112179602.9073
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | sum of deviations: 3103240123159.8765
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | mean x: 1764127798.4845362
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | mean y: 4143192.9793814435
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | intersect: -302251702688.7701
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | chi2: 32.578853266217834
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | current chi2=32.578853266217834 (change=7.2999422822270965 %)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | right removable region: 387
[2025-11-26 00:52:48] 2025-11-26 06:52:15,797 | INFO     | sum of square deviations: 18111994164.83512
[2025-11-26 00:52:48] 2025-11-26 06:52:15,799 | INFO     | sum of deviations: 2804731239929.155
[2025-11-26 00:52:48] 2025-11-26 06:52:15,799 | INFO     | mean x: 1764128103.4793816
[2025-11-26 00:52:48] 2025-11-26 06:52:15,799 | INFO     | mean y: 4147391.644329897
[2025-11-26 00:52:48] 2025-11-26 06:52:15,799 | INFO     | intersect: -273179752627.0556
[2025-11-26 00:52:48] 2025-11-26 06:52:15,800 | INFO     | chi2: 33.08996888560269
[2025-11-26 00:52:48] 2025-11-26 06:52:15,800 | INFO     | current chi2=33.08996888560269 (change=5.845610939430524 %)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,800 | INFO     | left removable region: 10
[2025-11-26 00:52:48] 2025-11-26 06:52:15,800 | INFO     | sum of square deviations: 16614918799.989466
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | sum of deviations: 2859802971545.6665
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | mean x: 1764128072.994695
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | mean y: 4194023.832891247
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | intersect: -303642111207.6172
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | chi2: 30.43810762900901
[2025-11-26 00:52:48] 2025-11-26 06:52:15,802 | INFO     | current memory leak: 172.12 B/s (using 377 data points, chi2=30.44)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | could have reported an average CPU frequency of 2297 MHz (17 samples)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | ..............................
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . Timing measurements:
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . get job = 0 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . initial setup = 3 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . payload setup = 4 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . stage-in = 0 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . payload execution = 23932 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . stage-out = 3 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | . log creation = 0 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,803 | INFO     | ..............................
[2025-11-26 00:52:48] 2025-11-26 06:52:15,848 | INFO     | 
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | job summary report
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | --------------------------------------------------
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | PanDA job id: 6896557296
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | task id: 47556161
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | errors: (none)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | pilot state: finished 
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | transexitcode: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | exeerrorcode: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | exeerrordiag: 
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | exitcode: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | exitmsg: OK
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | cpuconsumptiontime: 281132 s
[2025-11-26 00:52:48] 2025-11-26 06:52:15,849 | INFO     | nevents: 1000
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | neventsw: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | pid: 403557
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | pgrp: 403557
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | corecount: 12
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | event service: False
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | sizes: {0: 2284268, 3: 2284530, 11: 2284558, 23941: 2320812, 23945: 2329848, 23947: 2329904, 23950: 2330342}
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | --------------------------------------------------
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | 
[2025-11-26 00:52:48] 2025-11-26 06:52:15,850 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:52:48] 2025-11-26 06:52:15,866 | INFO     | job 6896557296 has completed (purged errors)
[2025-11-26 00:52:48] 2025-11-26 06:52:15,866 | INFO     | overall cleanup function is called
[2025-11-26 00:52:48] 2025-11-26 06:52:16,881 | INFO     | --- collectZombieJob: --- 10, [403557]
[2025-11-26 00:52:48] 2025-11-26 06:52:16,882 | INFO     | zombie collector waiting for pid 403557
[2025-11-26 00:52:48] 2025-11-26 06:52:16,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:52:48] 2025-11-26 06:52:16,882 | INFO     | collected zombie processes
[2025-11-26 00:52:48] 2025-11-26 06:52:16,882 | INFO     | will attempt to kill all subprocesses of pid=403557
[2025-11-26 00:52:48] 2025-11-26 06:52:16,956 | INFO     | process IDs to be killed: [403557] (in reverse order)
[2025-11-26 00:52:48] 2025-11-26 06:52:16,990 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:52:48] 2025-11-26 06:52:16,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:52:48] 2025-11-26 06:52:16,994 | INFO     | did not find any defunct processes belonging to 403557
[2025-11-26 00:52:48] 2025-11-26 06:52:16,996 | INFO     | did not find any defunct processes belonging to 403557
[2025-11-26 00:52:48] 2025-11-26 06:52:16,996 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:52:48] 2025-11-26 06:52:16,997 | INFO     | ready for new job
[2025-11-26 00:52:48] 2025-11-26 06:52:16,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:52:48] 2025-11-26 06:52:16,999 | INFO     | ***************************************
[2025-11-26 00:52:48] 2025-11-26 06:52:16,999 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:52:48] 2025-11-26 06:52:16,999 | INFO     | ***************************************
[2025-11-26 00:52:48] 2025-11-26 06:52:16,999 | INFO     | 
[2025-11-26 00:52:48] 2025-11-26 06:52:16,999 | INFO     | architecture information:
[2025-11-26 00:52:48] 2025-11-26 06:52:17,000 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:52:48] 2025-11-26 06:52:17,010 | INFO     | cat /etc/os-release:
[2025-11-26 00:52:48] NAME="CentOS Linux"
[2025-11-26 00:52:48] VERSION="7 (Core)"
[2025-11-26 00:52:48] ID="centos"
[2025-11-26 00:52:48] ID_LIKE="rhel fedora"
[2025-11-26 00:52:48] VERSION_ID="7"
[2025-11-26 00:52:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:52:48] ANSI_COLOR="0;31"
[2025-11-26 00:52:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:52:48] HOME_URL="https://www.centos.org/"
[2025-11-26 00:52:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:52:48] 
[2025-11-26 00:52:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:52:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:52:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:52:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:52:48] 
[2025-11-26 00:52:48] 2025-11-26 06:52:17,010 | INFO     | ***************************************
[2025-11-26 00:52:48] 2025-11-26 06:52:17,513 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2025-11-26 00:52:48] 2025-11-26 06:52:17,525 | INFO     | sufficient remaining disk space (14205059072 B)
[2025-11-26 00:52:48] 2025-11-26 06:52:17,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:52:48] 2025-11-26 06:52:17,526 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:52:48] 2025-11-26 06:52:17,526 | INFO     | update_server=False
[2025-11-26 00:52:48] 2025-11-26 06:52:17,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:52:48] 2025-11-26 06:52:17,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:52:48] 2025-11-26 06:52:17,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:52:48] 2025-11-26 06:52:17,638 | INFO     | all data control threads have been joined
[2025-11-26 00:52:48] 2025-11-26 06:52:17,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 00:52:48] 2025-11-26 06:52:17,927 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 00:52:48] 2025-11-26 06:52:17,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:52:48] 2025-11-26 06:52:17,927 | INFO     | will abort loop
[2025-11-26 00:52:48] 2025-11-26 06:52:18,530 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:18,531 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:18,544 | INFO     | all payload control threads have been joined
[2025-11-26 00:52:48] 2025-11-26 06:52:18,642 | INFO     | [data] control thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:18,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:52:48] 2025-11-26 06:52:18,932 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,010 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,099 | INFO     | all job control threads have been joined
[2025-11-26 00:52:48] 2025-11-26 06:52:19,110 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,374 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,375 | INFO     | [job] validate thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,531 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,549 | INFO     | [payload] control thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,610 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,726 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:19,766 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:20,102 | INFO     | [job] control thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:22,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:52:48] 2025-11-26 06:52:32,029 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:52:48] 2025-11-26 06:52:33,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862192441152)>', '<ExcThread(monitor, started 139860828477184)>']
[2025-11-26 00:52:48] 2025-11-26 06:52:38,059 | INFO     | all workflow threads have been joined
[2025-11-26 00:52:48] 2025-11-26 06:52:38,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:52:48] 2025-11-26 06:52:38,061 | INFO     | traces error code: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:38,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:52:48] 2025-11-26 06:52:48,626 | INFO     | PID=396956 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 00:52:48] 2025-11-26 06:52:48,627 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:52:48] 2025-11-26 06:52:48,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:52:48] 2025-11-26 06:52:48,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:52:48] 2025-11-26 06:52:48,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:52:48] 2025-11-26 06:52:48,627 | INFO     | [monitor] control thread has ended
[2025-11-26 00:52:48] 2025-11-26 06:52:48,735 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:52:48] 2025-11-26 06:52:48,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:52:48] 2025-11-26 06:52:48,739 [wrapper] pilotpid: 396956
[2025-11-26 00:52:48] 2025-11-26 06:52:48,741 [wrapper] Pilot exit status: 0
[2025-11-26 00:52:48] 2025-11-26 06:52:48,749 [wrapper] pandaids: 6896557296
[2025-11-26 00:52:48] 2025-11-26 06:52:48,772 [wrapper] cleanup supervisor_pilot  510684 396957
[2025-11-26 00:52:48] 2025-11-26 06:52:48,774 [wrapper] Test setup, not cleaning
[2025-11-26 00:52:48] 2025-11-26 06:52:48,777 [wrapper] apfmon messages muted
[2025-11-26 00:52:48] 2025-11-26 06:52:48,778 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:52:48] 2025-11-26 06:52:48,780 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:52:48]  *** Error codes and diagnostics ***
[2025-11-26 00:52:48]     "exeErrorCode": 0,
[2025-11-26 00:52:48]     "exeErrorDiag": "",
[2025-11-26 00:52:48]     "pilotErrorCode": 0,
[2025-11-26 00:52:48]     "pilotErrorDiag": "",
[2025-11-26 00:52:48]  *** Listing of results directory ***
[2025-11-26 00:52:48] total 1308888
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc    576529 Nov 24 22:09 pilot3.tar.gz
[2025-11-26 00:52:48] -rwx------ 1 boinc boinc     36292 Nov 24 22:58 runpilot2-wrapper.sh
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc      5112 Nov 24 22:58 queuedata.json
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc       100 Nov 25 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:52:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 18:12 run_atlas
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc       105 Nov 25 18:12 job.xml
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc 408801381 Nov 25 18:12 EVNT.47483658._002086.pool.root.1
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc     15847 Nov 25 18:12 start_atlas.sh
[2025-11-26 00:52:48] drwxrwx--x 2 boinc boinc      4096 Nov 25 18:12 shared
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc    590101 Nov 25 18:12 input.tar.gz
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc      6991 Nov 25 18:12 init_data.xml
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc         0 Nov 25 18:12 boinc_lockfile
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc      2783 Nov 25 18:12 pandaJob.out
[2025-11-26 00:52:48] -rw------- 1 boinc boinc    991877 Nov 25 18:12 agis_schedconf.cvmfs.json
[2025-11-26 00:52:48] drwx------ 5 boinc boinc      4096 Nov 25 18:12 pilot3
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc       532 Nov 26 00:44 boinc_task_state.xml
[2025-11-26 00:52:48] -rw------- 1 boinc boinc 916579498 Nov 26 00:51 HITS.47556161._000698.pool.root.1
[2025-11-26 00:52:48] -rw------- 1 boinc boinc      1060 Nov 26 00:52 memory_monitor_summary.json
[2025-11-26 00:52:48] -rw------- 1 boinc boinc   1516240 Nov 26 00:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:52:48] -rw------- 1 boinc boinc   2121598 Nov 26 00:52 log.47556161._000698.job.log.tgz.1
[2025-11-26 00:52:48] -rw------- 1 boinc boinc      8641 Nov 26 00:52 heartbeat.json
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc      8192 Nov 26 00:52 boinc_mmap_file
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc        29 Nov 26 00:52 wrapper_checkpoint.txt
[2025-11-26 00:52:48] -rw------- 1 boinc boinc       746 Nov 26 00:52 pilotlog.txt
[2025-11-26 00:52:48] -rw------- 1 boinc boinc        95 Nov 26 00:52 pilot_heartbeat.json
[2025-11-26 00:52:48] -rw------- 1 boinc boinc   3380949 Nov 26 00:52 log.47556161._000698.job.log.1
[2025-11-26 00:52:48] -rw------- 1 boinc boinc       353 Nov 26 00:52 output.list
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc       620 Nov 26 00:52 runtime_log
[2025-11-26 00:52:48] -rw------- 1 boinc boinc   5519360 Nov 26 00:52 result.tar.gz
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc      8869 Nov 26 00:52 runtime_log.err
[2025-11-26 00:52:48] -rw------- 1 boinc boinc       651 Nov 26 00:52 r5VNDmbJ0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmR8LKDmSmQ5dm.diag
[2025-11-26 00:52:48] -rw-r--r-- 1 boinc boinc     21894 Nov 26 00:52 stderr.txt
[2025-11-26 00:52:48] HITS file was successfully produced:
[2025-11-26 00:52:48] -rw------- 1 boinc boinc 916579498 Nov 26 00:51 shared/HITS.pool.root.1
[2025-11-26 00:52:48]  *** Contents of shared directory: ***
[2025-11-26 00:52:48] total 1300320
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc 408801381 Nov 25 18:12 ATLAS.root_0
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc     15847 Nov 25 18:12 start_atlas.sh
[2025-11-26 00:52:48] -rw-r--r-- 2 boinc boinc    590101 Nov 25 18:12 input.tar.gz
[2025-11-26 00:52:48] -rw------- 1 boinc boinc 916579498 Nov 26 00:51 HITS.pool.root.1
[2025-11-26 00:52:48] -rw------- 1 boinc boinc   5519360 Nov 26 00:52 result.tar.gz
00:52:50 (392497): run_atlas exited; CPU time 280912.315271
00:52:50 (392497): called boinc_finish(0)

</stderr_txt>
]]>

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