Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
08:14:46 (4165061): wrapper (7.7.26015): starting
08:14:46 (4165061): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 08:14:46] Arguments: --nthreads 10
[2025-11-27 08:14:46] Threads: 10
[2025-11-27 08:14:46] Checking for CVMFS
[2025-11-27 08:14:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:14:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:14:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:14:46] 2.13.3.0 4524 9372 58560 153372 1 90 3885602 4096001 12810 130560 0 1298774338 99.999 1309093 711 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-27 08:14:46] CVMFS is ok
[2025-11-27 08:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:14:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 08:14:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 08:14:46] Further information can be found at the LHC@home message board.
[2025-11-27 08:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:14:46] Checking for apptainer binary...
[2025-11-27 08:14:46] apptainer is not installed, using version from CVMFS
[2025-11-27 08:14:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:14:46] 7950x-linux
[2025-11-27 08:14:46] apptainer works
[2025-11-27 08:14:46] Set ATHENA_PROC_NUMBER=10
[2025-11-27 08:14:46] Set ATHENA_CORE_NUMBER=10
[2025-11-27 08:14:46] Starting ATLAS job with PandaID=6895883553
[2025-11-27 08:14:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc514/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:15:49]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:15:49] 2025-11-28 09:14:43,270 | INFO     | using path: /var/lib/multiboinc/boinc514/slots/2/PanDA_Pilot-6895883553/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,271 | INFO     | extracted standard info from prmon json
[2025-11-28 01:15:49] 2025-11-28 09:14:43,271 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:15:49] 2025-11-28 09:14:43,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:15:49] 2025-11-28 09:14:43,279 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:15:49] 2025-11-28 09:14:43,280 | INFO     | sum of square deviations: 312882831151.8566
[2025-11-28 01:15:49] 2025-11-28 09:14:43,291 | INFO     | sum of deviations: 2309913863967.143
[2025-11-28 01:15:49] 2025-11-28 09:14:43,291 | INFO     | mean x: 1764290692.011964
[2025-11-28 01:15:49] 2025-11-28 09:14:43,291 | INFO     | mean y: 3160224.8215353936
[2025-11-28 01:15:49] 2025-11-28 09:14:43,291 | INFO     | intersect: -13022033629.834743
[2025-11-28 01:15:49] 2025-11-28 09:14:43,291 | INFO     | chi2: 5.535519287657671
[2025-11-28 01:15:49] 2025-11-28 09:14:43,292 | INFO     | sum of square deviations: 308226924259.35565
[2025-11-28 01:15:49] 2025-11-28 09:14:43,306 | INFO     | sum of deviations: 2623398791452.1704
[2025-11-28 01:15:49] 2025-11-28 09:14:43,306 | INFO     | mean x: 1764290539.5120242
[2025-11-28 01:15:49] 2025-11-28 09:14:43,306 | INFO     | mean y: 3170483.5691382764
[2025-11-28 01:15:49] 2025-11-28 09:14:43,306 | INFO     | intersect: -15013161007.41953
[2025-11-28 01:15:49] 2025-11-28 09:14:43,307 | INFO     | chi2: 3.0320980918771707
[2025-11-28 01:15:49] 2025-11-28 09:14:43,307 | INFO     | current chi2=3.0320980918771707 (change=45.224685629084156 %)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,307 | INFO     | sum of square deviations: 303617436841.8553
[2025-11-28 01:15:49] 2025-11-28 09:14:43,312 | INFO     | monitor loop #4440: job 0:6895883553 is in state 'finished'
[2025-11-28 01:15:49] 2025-11-28 09:14:43,318 | INFO     | sum of deviations: 2672772104027.5083
[2025-11-28 01:15:49] 2025-11-28 09:14:43,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | mean x: 1764290387.0120845
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | mean y: 3172111.207452165
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | intersect: -15528037752.295792
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | chi2: 2.8148166393775673
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | current chi2=2.8148166393775673 (change=7.16604298131676 %)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,319 | INFO     | right removable region: 992
[2025-11-28 01:15:49] 2025-11-28 09:14:43,320 | INFO     | sum of square deviations: 308226916939.35565
[2025-11-28 01:15:49] 2025-11-28 09:14:43,334 | INFO     | sum of deviations: 1985974322147.0251
[2025-11-28 01:15:49] 2025-11-28 09:14:43,334 | INFO     | mean x: 1764290844.5120242
[2025-11-28 01:15:49] 2025-11-28 09:14:43,334 | INFO     | mean y: 3170824.248496994
[2025-11-28 01:15:49] 2025-11-28 09:14:43,335 | INFO     | intersect: -11364546014.996134
[2025-11-28 01:15:49] 2025-11-28 09:14:43,335 | INFO     | chi2: 3.077928157421323
[2025-11-28 01:15:49] 2025-11-28 09:14:43,335 | INFO     | current chi2=3.077928157421323 (change=44.396758506757294 %)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,336 | INFO     | sum of square deviations: 303617422201.8553
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | sum of deviations: 1892771985540.4023
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | mean x: 1764290997.0120845
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | mean y: 3173907.216515609
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | intersect: -10995538054.92336
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | chi2: 2.9857611126826398
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | current chi2=2.9857611126826398 (change=2.9944508131697436 %)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,351 | INFO     | left removable region: 20
[2025-11-28 01:15:49] 2025-11-28 09:14:43,352 | INFO     | sum of square deviations: 284759153250.8751
[2025-11-28 01:15:49] 2025-11-28 09:14:43,362 | INFO     | sum of deviations: 2115317358222.3667
[2025-11-28 01:15:49] 2025-11-28 09:14:43,362 | INFO     | mean x: 1764290966.5113168
[2025-11-28 01:15:49] 2025-11-28 09:14:43,363 | INFO     | mean y: 3190547.057613169
[2025-11-28 01:15:49] 2025-11-28 09:14:43,363 | INFO     | intersect: -13102745693.483007
[2025-11-28 01:15:49] 2025-11-28 09:14:43,363 | INFO     | chi2: 0.18798353077024785
[2025-11-28 01:15:49] 2025-11-28 09:14:43,363 | INFO     | current memory leak: 7.43 B/s (using 972 data points, chi2=0.19)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | ..............................
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . Timing measurements:
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . get job = 0 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . initial setup = 3 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . payload setup = 7 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . stage-in = 0 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . payload execution = 61140 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . stage-out = 4 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | . log creation = 0 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,364 | INFO     | ..............................
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | 
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | job summary report
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | --------------------------------------------------
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | PanDA job id: 6895883553
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | task id: 47556149
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | errors: (none)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | pilot state: finished 
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | transexitcode: 0
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | exeerrorcode: 0
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | exeerrordiag: 
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | exitcode: 0
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | exitmsg: OK
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | cpuconsumptiontime: 136664 s
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | nevents: 1000
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | neventsw: 0
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | pid: 4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | pgrp: 4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | corecount: 10
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | event service: False
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | sizes: {0: 2284323, 6: 2284585, 11: 2284613, 61151: 2337486, 61156: 2346592, 61166: 2346782}
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | --------------------------------------------------
[2025-11-28 01:15:49] 2025-11-28 09:14:43,621 | INFO     | 
[2025-11-28 01:15:49] 2025-11-28 09:14:43,622 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc514/slots/2
[2025-11-28 01:15:49] 2025-11-28 09:14:43,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | job 6895883553 has completed (purged errors)
[2025-11-28 01:15:49] 2025-11-28 09:14:43,643 | INFO     | overall cleanup function is called
[2025-11-28 01:15:49] 2025-11-28 09:14:44,662 | INFO     | --- collectZombieJob: --- 10, [4175607]
[2025-11-28 01:15:49] 2025-11-28 09:14:44,663 | INFO     | zombie collector waiting for pid 4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:44,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:15:49] 2025-11-28 09:14:44,663 | INFO     | collected zombie processes
[2025-11-28 01:15:49] 2025-11-28 09:14:44,663 | INFO     | will attempt to kill all subprocesses of pid=4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:45,023 | INFO     | process IDs to be killed: [4175607] (in reverse order)
[2025-11-28 01:15:49] 2025-11-28 09:14:45,167 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:15:49] 2025-11-28 09:14:45,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:15:49] 2025-11-28 09:14:45,173 | INFO     | did not find any defunct processes belonging to 4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:45,178 | INFO     | did not find any defunct processes belonging to 4175607
[2025-11-28 01:15:49] 2025-11-28 09:14:45,179 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:15:49] 2025-11-28 09:14:45,179 | INFO     | ready for new job
[2025-11-28 01:15:49] 2025-11-28 09:14:45,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:15:49] 2025-11-28 09:14:45,182 | INFO     | ***************************************
[2025-11-28 01:15:49] 2025-11-28 09:14:45,182 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:15:49] 2025-11-28 09:14:45,182 | INFO     | ***************************************
[2025-11-28 01:15:49] 2025-11-28 09:14:45,182 | INFO     | 
[2025-11-28 01:15:49] 2025-11-28 09:14:45,184 | INFO     | architecture information:
[2025-11-28 01:15:49] 2025-11-28 09:14:45,184 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:15:49] 2025-11-28 09:14:45,214 | INFO     | cat /etc/os-release:
[2025-11-28 01:15:49] NAME="CentOS Linux"
[2025-11-28 01:15:49] VERSION="7 (Core)"
[2025-11-28 01:15:49] ID="centos"
[2025-11-28 01:15:49] ID_LIKE="rhel fedora"
[2025-11-28 01:15:49] VERSION_ID="7"
[2025-11-28 01:15:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:15:49] ANSI_COLOR="0;31"
[2025-11-28 01:15:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:15:49] HOME_URL="https://www.centos.org/"
[2025-11-28 01:15:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:15:49] 
[2025-11-28 01:15:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:15:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:15:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:15:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:15:49] 
[2025-11-28 01:15:49] 2025-11-28 09:14:45,215 | INFO     | ***************************************
[2025-11-28 01:15:49] 2025-11-28 09:14:45,717 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc514/slots/2
[2025-11-28 01:15:49] 2025-11-28 09:14:45,746 | INFO     | sufficient remaining disk space (195234365440 B)
[2025-11-28 01:15:49] 2025-11-28 09:14:45,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:15:49] 2025-11-28 09:14:45,746 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:15:49] 2025-11-28 09:14:45,746 | INFO     | update_server=False
[2025-11-28 01:15:49] 2025-11-28 09:14:45,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:15:49] 2025-11-28 09:14:45,821 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 01:15:49] 2025-11-28 09:14:45,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 01:15:49] 2025-11-28 09:14:45,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:15:49] 2025-11-28 09:14:45,822 | INFO     | will abort loop
[2025-11-28 01:15:49] 2025-11-28 09:14:46,037 | INFO     | all payload control threads have been joined
[2025-11-28 01:15:49] 2025-11-28 09:14:46,264 | INFO     | all job control threads have been joined
[2025-11-28 01:15:49] 2025-11-28 09:14:46,708 | INFO     | all data control threads have been joined
[2025-11-28 01:15:49] 2025-11-28 09:14:46,751 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:46,826 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:46,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:15:49] 2025-11-28 09:14:47,042 | INFO     | [payload] control thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,269 | INFO     | [job] control thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,353 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,393 | INFO     | [job] validate thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,511 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,681 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,713 | INFO     | [data] control thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,962 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:47,964 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:48,017 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:48,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:15:49] 2025-11-28 09:14:48,913 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:48,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:15:49] 2025-11-28 09:14:49,434 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:52,982 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:15:49] 2025-11-28 09:14:57,075 [wrapper] supervise_pilot (15 min periods counter: 69)
[2025-11-28 01:15:49] 2025-11-28 09:15:15,751 | INFO     | PID=4168901 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:15:49] 2025-11-28 09:15:15,752 | INFO     | .. there are 13 such processes running
[2025-11-28 01:15:49] 2025-11-28 09:15:15,752 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:15:49] 2025-11-28 09:15:15,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:15:49] 2025-11-28 09:15:15,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:15:49] 2025-11-28 09:15:41,904 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:15:49] 2025-11-28 09:15:43,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138686016685888)>', '<ExcThread(monitor, started 138685299291904)>']
[2025-11-28 01:15:49] 2025-11-28 09:15:43,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:15:49] 2025-11-28 09:15:43,901 | INFO     | [monitor] control thread has ended
[2025-11-28 01:15:49] 2025-11-28 09:15:48,794 | INFO     | all workflow threads have been joined
[2025-11-28 01:15:49] 2025-11-28 09:15:48,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:15:49] 2025-11-28 09:15:48,795 | INFO     | traces error code: 0
[2025-11-28 01:15:49] 2025-11-28 09:15:48,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:15:49] 2025-11-28 09:15:48,915 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:15:49] 2025-11-28 09:15:48,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:15:49] 2025-11-28 09:15:48,921 [wrapper] pilotpid: 4168901
[2025-11-28 01:15:49] 2025-11-28 09:15:48,927 [wrapper] Pilot exit status: 0
[2025-11-28 01:15:49] 2025-11-28 09:15:48,934 [wrapper] pandaids: 6895883553
[2025-11-28 01:15:49] 2025-11-28 09:15:48,997 [wrapper] cleanup supervisor_pilot 1355759 4168902
[2025-11-28 01:15:49] 2025-11-28 09:15:49,000 [wrapper] Test setup, not cleaning
[2025-11-28 01:15:49] 2025-11-28 09:15:49,001 [wrapper] apfmon messages muted
[2025-11-28 01:15:49] 2025-11-28 09:15:49,003 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:15:49] 2025-11-28 09:15:49,005 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:15:49]  *** Error codes and diagnostics ***
[2025-11-28 01:15:49]     "exeErrorCode": 0,
[2025-11-28 01:15:49]     "exeErrorDiag": "",
[2025-11-28 01:15:49]     "pilotErrorCode": 0,
[2025-11-28 01:15:49]     "pilotErrorDiag": "",
[2025-11-28 01:15:49]  *** Listing of results directory ***
[2025-11-28 01:15:49] total 1325728
[2025-11-28 01:15:49] -rw-r--r-- 1 root root    576529 Nov 24 08:06 pilot3.tar.gz
[2025-11-28 01:15:49] -rw-r--r-- 1 root root      5112 Nov 24 08:46 queuedata.json
[2025-11-28 01:15:49] -rwx------ 1 4871 1028     36292 Nov 24 08:50 runpilot2-wrapper.sh
[2025-11-28 01:15:49] -rw-r--r-- 1 root root       100 Nov 27 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:15:49] -rwxr-xr-x 1 root root      7986 Nov 27 08:14 run_atlas
[2025-11-28 01:15:49] -rw-r--r-- 1 root root       105 Nov 27 08:14 job.xml
[2025-11-28 01:15:49] -rw-r--r-- 1 root root      7071 Nov 27 08:14 init_data.xml
[2025-11-28 01:15:49] -rw-r--r-- 2 root root 409618145 Nov 27 08:14 EVNT.47483658._001392.pool.root.1
[2025-11-28 01:15:49] drwxrwx--x 2 root root      4096 Nov 27 08:14 shared
[2025-11-28 01:15:49] -rw-r--r-- 2 root root    590108 Nov 27 08:14 input.tar.gz
[2025-11-28 01:15:49] -rw-r--r-- 2 root root     15847 Nov 27 08:14 start_atlas.sh
[2025-11-28 01:15:49] -rw-r--r-- 1 root root         0 Nov 27 08:14 boinc_lockfile
[2025-11-28 01:15:49] -rw-r--r-- 1 root root      2783 Nov 27 08:14 pandaJob.out
[2025-11-28 01:15:49] -rw------- 1 root root    991572 Nov 27 08:14 agis_schedconf.cvmfs.json
[2025-11-28 01:15:49] drwxr-xr-x 5  320  320      4096 Nov 27 08:15 pilot3
[2025-11-28 01:15:49] -rw-r--r-- 1 root root       533 Nov 28 01:05 boinc_task_state.xml
[2025-11-28 01:15:49] -rw------- 1 root root 921843307 Nov 28 01:14 HITS.47556149._003781.pool.root.1
[2025-11-28 01:15:49] -rw------- 1 root root      1050 Nov 28 01:14 memory_monitor_summary.json
[2025-11-28 01:15:49] -rw------- 1 root root   1516240 Nov 28 01:14 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:15:49] -rw------- 1 root root   2380322 Nov 28 01:14 log.47556149._003781.job.log.tgz.1
[2025-11-28 01:15:49] -rw------- 1 root root      8596 Nov 28 01:14 heartbeat.json
[2025-11-28 01:15:49] -rw------- 1 root root        95 Nov 28 01:15 pilot_heartbeat.json
[2025-11-28 01:15:49] -rw-r--r-- 1 root root      8192 Nov 28 01:15 boinc_mmap_file
[2025-11-28 01:15:49] -rw-r--r-- 1 root root        29 Nov 28 01:15 wrapper_checkpoint.txt
[2025-11-28 01:15:49] -rw------- 1 root root      5025 Nov 28 01:15 pilotlog.txt
[2025-11-28 01:15:49] -rw------- 1 root root   8703080 Nov 28 01:15 log.47556149._003781.job.log.1
[2025-11-28 01:15:49] -rw------- 1 root root       353 Nov 28 01:15 output.list
[2025-11-28 01:15:49] -rw-r--r-- 1 root root       620 Nov 28 01:15 runtime_log
[2025-11-28 01:15:49] -rw------- 1 root root  11100160 Nov 28 01:15 result.tar.gz
[2025-11-28 01:15:49] -rw-r--r-- 1 root root      9021 Nov 28 01:15 runtime_log.err
[2025-11-28 01:15:49] -rw------- 1 root root       662 Nov 28 01:15 CczLDmtwoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmomLKDmFKd5Jo.diag
[2025-11-28 01:15:49] -rw-r--r-- 1 root root     21434 Nov 28 01:15 stderr.txt
[2025-11-28 01:15:49] HITS file was successfully produced:
[2025-11-28 01:15:49] -rw------- 1 root root 921843307 Nov 28 01:14 shared/HITS.pool.root.1
[2025-11-28 01:15:49]  *** Contents of shared directory: ***
[2025-11-28 01:15:49] total 1311704
[2025-11-28 01:15:49] -rw-r--r-- 2 root root 409618145 Nov 27 08:14 ATLAS.root_0
[2025-11-28 01:15:49] -rw-r--r-- 2 root root    590108 Nov 27 08:14 input.tar.gz
[2025-11-28 01:15:49] -rw-r--r-- 2 root root     15847 Nov 27 08:14 start_atlas.sh
[2025-11-28 01:15:49] -rw------- 1 root root 921843307 Nov 28 01:14 HITS.pool.root.1
[2025-11-28 01:15:49] -rw------- 1 root root  11100160 Nov 28 01:15 result.tar.gz
01:15:50 (4165061): run_atlas exited; CPU time 136781.262695
01:15:50 (4165061): called boinc_finish(0)

</stderr_txt>
]]>

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