Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:54:47 (2374090): wrapper (7.7.26015): starting
20:54:47 (2374090): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:54:47] Arguments: --nthreads 8
[2025-11-25 20:54:47] Threads: 8
[2025-11-25 20:54:47] Checking for CVMFS
[2025-11-25 20:54:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:54:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:54:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:54:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:54:48] 2.13.2.0 6491 35870 233396 153304 0 382 23995722 40960000 29452 16776704 0 151174416 99.580 151714438 40102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 20:54:48] CVMFS is ok
[2025-11-25 20:54:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:54:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:54:48] Further information can be found at the LHC@home message board.
[2025-11-25 20:54:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:54:48] Checking for apptainer binary...
[2025-11-25 20:54:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:54:48] Running /usr/bin/apptainer --version
[2025-11-25 20:54:48] apptainer version 1.4.4-1.el9
[2025-11-25 20:54:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:54:48] c-212-20.aglt2.org
[2025-11-25 20:54:48] apptainer works
[2025-11-25 20:54:48] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:54:48] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:54:48] Starting ATLAS job with PandaID=6896556889
[2025-11-25 20:54:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:20:42]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:20:42] 2025-11-26 12:20:06,743 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:20:42] 2025-11-26 12:20:06,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:20:42] 2025-11-26 12:20:06,792 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:20:42] 2025-11-26 12:20:06,793 | INFO     | sum of square deviations: 71780756433.12054
[2025-11-26 07:20:42] 2025-11-26 12:20:06,800 | INFO     | sum of deviations: 734674405736.2633
[2025-11-26 07:20:42] 2025-11-26 12:20:06,800 | INFO     | mean x: 1764140856.7296417
[2025-11-26 07:20:42] 2025-11-26 12:20:06,800 | INFO     | mean y: 2854393.881107492
[2025-11-26 07:20:42] 2025-11-26 12:20:06,800 | INFO     | intersect: -18053087058.34479
[2025-11-26 07:20:42] 2025-11-26 12:20:06,801 | INFO     | chi2: 7.620102549796579
[2025-11-26 07:20:42] 2025-11-26 12:20:06,802 | INFO     | sum of square deviations: 70041913435.55995
[2025-11-26 07:20:42] 2025-11-26 12:20:06,808 | INFO     | sum of deviations: 941348495831.7676
[2025-11-26 07:20:42] 2025-11-26 12:20:06,809 | INFO     | mean x: 1764140704.2479475
[2025-11-26 07:20:42] 2025-11-26 12:20:06,809 | INFO     | mean y: 2872522.0147783253
[2025-11-26 07:20:42] 2025-11-26 12:20:06,809 | INFO     | intersect: -23706805254.096424
[2025-11-26 07:20:42] 2025-11-26 12:20:06,809 | INFO     | chi2: 4.362171240005993
[2025-11-26 07:20:42] 2025-11-26 12:20:06,809 | INFO     | current chi2=4.362171240005993 (change=42.75442867730904 %)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,810 | INFO     | sum of square deviations: 68331285479.66889
[2025-11-26 07:20:42] 2025-11-26 12:20:06,816 | INFO     | sum of deviations: 1067116404740.9402
[2025-11-26 07:20:42] 2025-11-26 12:20:06,817 | INFO     | mean x: 1764140551.7615893
[2025-11-26 07:20:42] 2025-11-26 12:20:06,817 | INFO     | mean y: 2883711.687086093
[2025-11-26 07:20:42] 2025-11-26 12:20:06,817 | INFO     | intersect: -27547356413.879593
[2025-11-26 07:20:42] 2025-11-26 12:20:06,817 | INFO     | chi2: 2.789310992731948
[2025-11-26 07:20:42] 2025-11-26 12:20:06,818 | INFO     | current chi2=2.789310992731948 (change=36.05682034783862 %)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,818 | INFO     | sum of square deviations: 66648566375.26231
[2025-11-26 07:20:42] 2025-11-26 12:20:06,824 | INFO     | sum of deviations: 1057565924184.5051
[2025-11-26 07:20:42] 2025-11-26 12:20:06,825 | INFO     | mean x: 1764140399.2671118
[2025-11-26 07:20:42] 2025-11-26 12:20:06,825 | INFO     | mean y: 2882838.609348915
[2025-11-26 07:20:42] 2025-11-26 12:20:06,825 | INFO     | intersect: -27990138965.301918
[2025-11-26 07:20:42] 2025-11-26 12:20:06,825 | INFO     | chi2: 2.7502854186608605
[2025-11-26 07:20:42] 2025-11-26 12:20:06,826 | INFO     | current chi2=2.7502854186608605 (change=1.3991116147599103 %)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,826 | INFO     | right removable region: 598
[2025-11-26 07:20:42] 2025-11-26 12:20:06,826 | INFO     | sum of square deviations: 70041078345.55994
[2025-11-26 07:20:42] 2025-11-26 12:20:06,833 | INFO     | sum of deviations: 552789188882.6653
[2025-11-26 07:20:42] 2025-11-26 12:20:06,833 | INFO     | mean x: 1764141009.2479475
[2025-11-26 07:20:42] 2025-11-26 12:20:06,833 | INFO     | mean y: 2870309.5320197046
[2025-11-26 07:20:42] 2025-11-26 12:20:06,833 | INFO     | intersect: -13920360180.517101
[2025-11-26 07:20:42] 2025-11-26 12:20:06,834 | INFO     | chi2: 4.990651153423057
[2025-11-26 07:20:42] 2025-11-26 12:20:06,834 | INFO     | current chi2=4.990651153423057 (change=34.50677178148627 %)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,835 | INFO     | sum of square deviations: 68329874858.19034
[2025-11-26 07:20:42] 2025-11-26 12:20:06,841 | INFO     | sum of deviations: 521628286440.3462
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | mean x: 1764141161.7599337
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | mean y: 2873084.6506622517
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | intersect: -13464529470.344845
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | chi2: 4.974682498709976
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | current chi2=4.974682498709976 (change=0.3199713669052637 %)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,842 | INFO     | left removable region: 20
[2025-11-26 07:20:42] 2025-11-26 12:20:06,843 | INFO     | sum of square deviations: 59881064272.0001
[2025-11-26 07:20:42] 2025-11-26 12:20:06,849 | INFO     | sum of deviations: 809893197119.7065
[2025-11-26 07:20:42] 2025-11-26 12:20:06,850 | INFO     | mean x: 1764140978.8235295
[2025-11-26 07:20:42] 2025-11-26 12:20:06,850 | INFO     | mean y: 2904996.389273356
[2025-11-26 07:20:42] 2025-11-26 12:20:06,850 | INFO     | intersect: -23857154855.24159
[2025-11-26 07:20:42] 2025-11-26 12:20:06,850 | INFO     | chi2: 0.03051117272629521
[2025-11-26 07:20:42] 2025-11-26 12:20:06,850 | INFO     | current memory leak: 13.53 B/s (using 578 data points, chi2=0.03)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,851 | INFO     | could have reported an average CPU frequency of 3289 MHz (24 samples)
[2025-11-26 07:20:42] 2025-11-26 12:20:06,851 | INFO     | ..............................
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . Timing measurements:
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . get job = 0 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . initial setup = 3 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . payload setup = 12 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . stage-in = 0 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . payload execution = 37434 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . stage-out = 7 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | . log creation = 2 s
[2025-11-26 07:20:42] 2025-11-26 12:20:06,852 | INFO     | ..............................
[2025-11-26 07:20:42] 2025-11-26 12:20:07,392 | INFO     | 
[2025-11-26 07:20:42] 2025-11-26 12:20:07,392 | INFO     | job summary report
[2025-11-26 07:20:42] 2025-11-26 12:20:07,392 | INFO     | --------------------------------------------------
[2025-11-26 07:20:42] 2025-11-26 12:20:07,392 | INFO     | PanDA job id: 6896556889
[2025-11-26 07:20:42] 2025-11-26 12:20:07,392 | INFO     | task id: 47556173
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | errors: (none)
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | pilot state: finished 
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | transexitcode: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | exeerrorcode: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | exeerrordiag: 
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | exitcode: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | exitmsg: OK
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | cpuconsumptiontime: 186656 s
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | nevents: 1000
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | neventsw: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | pid: 2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | pgrp: 2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | corecount: 8
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | event service: False
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | sizes: {0: 2283484, 1: 2284340, 2: 2284340, 10: 2284630, 12: 2284658, 37452: 2327325, 37460: 2336347, 37461: 2336403, 37470: 2336649}
[2025-11-26 07:20:42] 2025-11-26 12:20:07,393 | INFO     | --------------------------------------------------
[2025-11-26 07:20:42] 2025-11-26 12:20:07,394 | INFO     | 
[2025-11-26 07:20:42] 2025-11-26 12:20:07,394 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 07:20:42] 2025-11-26 12:20:07,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:20:42] 2025-11-26 12:20:07,444 | INFO     | job 6896556889 has completed (purged errors)
[2025-11-26 07:20:42] 2025-11-26 12:20:07,445 | INFO     | overall cleanup function is called
[2025-11-26 07:20:42] 2025-11-26 12:20:08,461 | INFO     | --- collectZombieJob: --- 10, [2384526]
[2025-11-26 07:20:42] 2025-11-26 12:20:08,461 | INFO     | zombie collector waiting for pid 2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:08,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:20:42] 2025-11-26 12:20:08,461 | INFO     | collected zombie processes
[2025-11-26 07:20:42] 2025-11-26 12:20:08,462 | INFO     | will attempt to kill all subprocesses of pid=2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:10,068 | INFO     | process IDs to be killed: [2384526] (in reverse order)
[2025-11-26 07:20:42] 2025-11-26 12:20:10,233 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:20:42] 2025-11-26 12:20:10,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:20:42] 2025-11-26 12:20:10,333 | INFO     | did not find any defunct processes belonging to 2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:10,402 | INFO     | did not find any defunct processes belonging to 2384526
[2025-11-26 07:20:42] 2025-11-26 12:20:10,412 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:20:42] 2025-11-26 12:20:10,412 | INFO     | ready for new job
[2025-11-26 07:20:42] 2025-11-26 12:20:10,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:20:42] 2025-11-26 12:20:10,415 | INFO     | ***************************************
[2025-11-26 07:20:42] 2025-11-26 12:20:10,422 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:20:42] 2025-11-26 12:20:10,422 | INFO     | ***************************************
[2025-11-26 07:20:42] 2025-11-26 12:20:10,422 | INFO     | 
[2025-11-26 07:20:42] 2025-11-26 12:20:10,437 | INFO     | architecture information:
[2025-11-26 07:20:42] 2025-11-26 12:20:10,450 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:20:42] 2025-11-26 12:20:10,502 | INFO     | cat /etc/os-release:
[2025-11-26 07:20:42] NAME="CentOS Linux"
[2025-11-26 07:20:42] VERSION="7 (Core)"
[2025-11-26 07:20:42] ID="centos"
[2025-11-26 07:20:42] ID_LIKE="rhel fedora"
[2025-11-26 07:20:42] VERSION_ID="7"
[2025-11-26 07:20:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:20:42] ANSI_COLOR="0;31"
[2025-11-26 07:20:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:20:42] HOME_URL="https://www.centos.org/"
[2025-11-26 07:20:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:20:42] 
[2025-11-26 07:20:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:20:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:20:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:20:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:20:42] 
[2025-11-26 07:20:42] 2025-11-26 12:20:10,502 | INFO     | ***************************************
[2025-11-26 07:20:42] 2025-11-26 12:20:11,006 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 07:20:42] 2025-11-26 12:20:11,047 | INFO     | sufficient remaining disk space (123931197440 B)
[2025-11-26 07:20:42] 2025-11-26 12:20:11,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:20:42] 2025-11-26 12:20:11,048 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:20:42] 2025-11-26 12:20:11,048 | INFO     | update_server=False
[2025-11-26 07:20:42] 2025-11-26 12:20:11,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:20:42] 2025-11-26 12:20:11,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:20:42] 2025-11-26 12:20:11,131 | INFO     | all data control threads have been joined
[2025-11-26 07:20:42] 2025-11-26 12:20:11,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:20:42] 2025-11-26 12:20:11,709 | INFO     | aborting loop
[2025-11-26 07:20:42] 2025-11-26 12:20:11,848 | INFO     | all job control threads have been joined
[2025-11-26 07:20:42] 2025-11-26 12:20:11,976 | INFO     | all payload control threads have been joined
[2025-11-26 07:20:42] 2025-11-26 12:20:12,054 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,137 | INFO     | [data] control thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,247 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,341 | INFO     | [job] validate thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:20:42] 2025-11-26 12:20:12,414 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,470 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,525 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,598 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,715 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,854 | INFO     | [job] control thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:12,982 | INFO     | [payload] control thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:13,056 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:13,277 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:13,356 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:13,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:20:42] 2025-11-26 12:20:17,512 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:20:42] 2025-11-26 12:20:21,030 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:20:42] 2025-11-26 12:20:21,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062518540096)>', '<ExcThread(monitor, started 140061433657088)>']
[2025-11-26 07:20:42] 2025-11-26 12:20:26,402 | INFO     | all workflow threads have been joined
[2025-11-26 07:20:42] 2025-11-26 12:20:26,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:20:42] 2025-11-26 12:20:26,402 | INFO     | traces error code: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:26,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:20:42] 2025-11-26 12:20:41,353 | INFO     | PID=2377908 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:20:42] 2025-11-26 12:20:41,353 | INFO     | .. there are 30 such processes running
[2025-11-26 07:20:42] 2025-11-26 12:20:41,361 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:20:42] 2025-11-26 12:20:41,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:20:42] 2025-11-26 12:20:41,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:20:42] 2025-11-26 12:20:41,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:20:42] 2025-11-26 12:20:41,362 | INFO     | [monitor] control thread has ended
[2025-11-26 07:20:42] 2025-11-26 12:20:42,397 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:20:42] 2025-11-26 12:20:42,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:20:42] 2025-11-26 12:20:42,451 [wrapper] pilotpid: 2377908
[2025-11-26 07:20:42] 2025-11-26 12:20:42,482 [wrapper] Pilot exit status: 0
[2025-11-26 07:20:42] 2025-11-26 12:20:42,592 [wrapper] pandaids: 6896556889
[2025-11-26 07:20:42] 2025-11-26 12:20:42,778 [wrapper] cleanup supervisor_pilot 1097789 2377909
[2025-11-26 07:20:42] 2025-11-26 12:20:42,780 [wrapper] Test setup, not cleaning
[2025-11-26 07:20:42] 2025-11-26 12:20:42,782 [wrapper] apfmon messages muted
[2025-11-26 07:20:42] 2025-11-26 12:20:42,790 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:20:42] 2025-11-26 12:20:42,807 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:20:42]  *** Error codes and diagnostics ***
[2025-11-26 07:20:42]     "exeErrorCode": 0,
[2025-11-26 07:20:42]     "exeErrorDiag": "",
[2025-11-26 07:20:42]     "pilotErrorCode": 0,
[2025-11-26 07:20:42]     "pilotErrorDiag": "",
[2025-11-26 07:20:42]  *** Listing of results directory ***
[2025-11-26 07:20:42] total 1308452
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:51 queuedata.json
[2025-11-26 07:20:42] -rwx------. 1 boincer umatlas     36292 Nov 24 23:52 runpilot2-wrapper.sh
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:20:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:54 run_atlas
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:54 job.xml
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas 411356478 Nov 25 20:54 EVNT.47483658._003062.pool.root.1
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:54 start_atlas.sh
[2025-11-26 07:20:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:54 shared
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 20:54 input.tar.gz
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:54 boinc_lockfile
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 20:54 pandaJob.out
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas        57 Nov 25 20:54 setup.sh.local
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas    991877 Nov 25 20:55 agis_schedconf.cvmfs.json
[2025-11-26 07:20:42] drwx------. 5 boincer umatlas      4096 Nov 25 20:55 pilot3
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas       532 Nov 26 07:07 boinc_task_state.xml
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas 911286689 Nov 26 07:19 HITS.47556173._000443.pool.root.1
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas      1048 Nov 26 07:19 memory_monitor_summary.json
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas   1854208 Nov 26 07:19 log.47556173._000443.job.log.tgz.1
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 07:20 init_data.xml
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas      8593 Nov 26 07:20 heartbeat.json
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas        95 Nov 26 07:20 pilot_heartbeat.json
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas       823 Nov 26 07:20 pilotlog.txt
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:20 boinc_mmap_file
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:20 wrapper_checkpoint.txt
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas   4790988 Nov 26 07:20 log.47556173._000443.job.log.1
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas       353 Nov 26 07:20 output.list
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:20 runtime_log
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas   6666240 Nov 26 07:20 result.tar.gz
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 07:20 runtime_log.err
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas       660 Nov 26 07:20 3j4KDmfD0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm77LKDm9Tvy7n.diag
[2025-11-26 07:20:42] -rw-r--r--. 1 boincer umatlas     21144 Nov 26 07:20 stderr.txt
[2025-11-26 07:20:42] HITS file was successfully produced:
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas 911286689 Nov 26 07:19 shared/HITS.pool.root.1
[2025-11-26 07:20:42]  *** Contents of shared directory: ***
[2025-11-26 07:20:42] total 1298764
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas 411356478 Nov 25 20:54 ATLAS.root_0
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:54 start_atlas.sh
[2025-11-26 07:20:42] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 20:54 input.tar.gz
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas 911286689 Nov 26 07:19 HITS.pool.root.1
[2025-11-26 07:20:42] -rw-------. 1 boincer umatlas   6666240 Nov 26 07:20 result.tar.gz
07:20:44 (2374090): run_atlas exited; CPU time 186842.608782
07:20:44 (2374090): called boinc_finish(0)

</stderr_txt>
]]>

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