Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:01 (2518866): wrapper (7.7.26015): starting
01:43:01 (2518866): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 01:43:01] Arguments: --nthreads 3
[2025-11-26 01:43:01] Threads: 3
[2025-11-26 01:43:01] Checking for CVMFS
[2025-11-26 01:43:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:43:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:43:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:43:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:43:02] 2.9.2.0 2184780 72 59588 153303 3 88 35483678 36864000 0 130560 0 1001596 100.000 1303 10593 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 01:43:02] CVMFS is ok
[2025-11-26 01:43:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:43:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:43:02] Further information can be found at the LHC@home message board.
[2025-11-26 01:43:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:43:02] Checking for apptainer binary...
[2025-11-26 01:43:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:43:02] Running /usr/bin/apptainer --version
[2025-11-26 01:43:02] apptainer version 1.4.1-1.1
[2025-11-26 01:43:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:43:02] thA335
[2025-11-26 01:43:02] apptainer works
[2025-11-26 01:43:02] Set ATHENA_PROC_NUMBER=3
[2025-11-26 01:43:02] Set ATHENA_CORE_NUMBER=3
[2025-11-26 01:43:02] Starting ATLAS job with PandaID=6896557274
[2025-11-26 01:43:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:47:20]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:47:20] 
[2025-11-26 01:47:20] 2025-11-26 00:46:27,844 | INFO     | ***************************************
[2025-11-26 01:47:20] 2025-11-26 00:46:28,348 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 01:47:20] 2025-11-26 00:46:28,361 | INFO     | sufficient remaining disk space (826532691968 B)
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | INFO     | update_server=False
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | INFO     | aborting loop
[2025-11-26 01:47:20] 2025-11-26 00:46:28,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:47:20] 2025-11-26 00:46:28,371 | INFO     | all data control threads have been joined
[2025-11-26 01:47:20] 2025-11-26 00:46:28,618 | INFO     | all job control threads have been joined
[2025-11-26 01:47:20] 2025-11-26 00:46:29,367 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,368 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,368 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,377 | INFO     | [data] control thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,419 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,420 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:47:20] 2025-11-26 00:46:29,624 | INFO     | [job] control thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,688 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:29,807 | INFO     | all payload control threads have been joined
[2025-11-26 01:47:20] 2025-11-26 00:46:30,391 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:30,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:30,780 | INFO     | [job] validate thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:30,813 | INFO     | [payload] control thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:30,813 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:30,861 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:31,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:47:20] 2025-11-26 00:46:31,486 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:35,467 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:47:20] 2025-11-26 00:46:59,284 | INFO     | PID=2522595 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 01:47:20] 2025-11-26 00:46:59,284 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:47:20] 2025-11-26 00:46:59,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:47:20] 2025-11-26 00:46:59,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:47:20] 2025-11-26 00:47:14,098 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:47:20] 2025-11-26 00:47:15,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680960792384)>', '<ExcThread(monitor, started 139680112699136)>']
[2025-11-26 01:47:20] 2025-11-26 00:47:15,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:47:20] 2025-11-26 00:47:15,370 | INFO     | [monitor] control thread has ended
[2025-11-26 01:47:20] 2025-11-26 00:47:20,151 | INFO     | all workflow threads have been joined
[2025-11-26 01:47:20] 2025-11-26 00:47:20,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:47:20] 2025-11-26 00:47:20,152 | INFO     | traces error code: 0
[2025-11-26 01:47:20] 2025-11-26 00:47:20,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:47:20] 2025-11-26 00:47:20,198 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:47:20] 2025-11-26 00:47:20,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:47:20] 2025-11-26 00:47:20,205 [wrapper] pilotpid: 2522595
[2025-11-26 01:47:20] 2025-11-26 00:47:20,208 [wrapper] Pilot exit status: 0
[2025-11-26 01:47:20] 2025-11-26 00:47:20,215 [wrapper] pandaids: 6896557274
[2025-11-26 01:47:20] 2025-11-26 00:47:20,231 [wrapper] cleanup supervisor_pilot 2522601 2522596
[2025-11-26 01:47:20] 2025-11-26 00:47:20,234 [wrapper] Test setup, not cleaning
[2025-11-26 01:47:20] 2025-11-26 00:47:20,236 [wrapper] apfmon messages muted
[2025-11-26 01:47:20] 2025-11-26 00:47:20,239 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:47:20] 2025-11-26 00:47:20,241 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:47:20]  *** Error codes and diagnostics ***
[2025-11-26 01:47:20]     "exeErrorCode": 65,
[2025-11-26 01:47:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:47:20]     "pilotErrorCode": 1305,
[2025-11-26 01:47:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:47:20]  *** Listing of results directory ***
[2025-11-26 01:47:20] total 406452
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc    576529 Nov 25 05:09 pilot3.tar.gz
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      5112 Nov 25 05:51 queuedata.json
[2025-11-26 01:47:20] -rwx------ 1 boinc boinc     36292 Nov 25 05:52 runpilot2-wrapper.sh
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:47:20] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:43 run_atlas
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:43 job.xml
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc 412012881 Nov 26 01:43 EVNT.47483658._002084.pool.root.1
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:43 input.tar.gz
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:43 start_atlas.sh
[2025-11-26 01:47:20] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:43 shared
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:43 boinc_setup_complete
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      6196 Nov 26 01:43 init_data.xml
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:43 boinc_lockfile
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      2783 Nov 26 01:43 pandaJob.out
[2025-11-26 01:47:20] -rw------- 1 boinc boinc    991877 Nov 26 01:43 agis_schedconf.cvmfs.json
[2025-11-26 01:47:20] -rw------- 1 boinc boinc   1516240 Nov 26 01:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:47:20] drwx------ 5 boinc boinc      4096 Nov 26 01:43 pilot3
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc       523 Nov 26 01:44 boinc_task_state.xml
[2025-11-26 01:47:20] -rw------- 1 boinc boinc       971 Nov 26 01:44 memory_monitor_summary.json
[2025-11-26 01:47:20] -rw------- 1 boinc boinc     55715 Nov 26 01:44 log.47556161._000676.job.log.tgz.1
[2025-11-26 01:47:20] -rw------- 1 boinc boinc        95 Nov 26 01:46 pilot_heartbeat.json
[2025-11-26 01:47:20] -rw------- 1 boinc boinc      8406 Nov 26 01:46 heartbeat.json
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc        23 Nov 26 01:47 wrapper_checkpoint.txt
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      8192 Nov 26 01:47 boinc_mmap_file
[2025-11-26 01:47:20] -rw------- 1 boinc boinc      4752 Nov 26 01:47 pilotlog.txt
[2025-11-26 01:47:20] -rw------- 1 boinc boinc     93369 Nov 26 01:47 log.47556161._000676.job.log.1
[2025-11-26 01:47:20] -rw------- 1 boinc boinc       186 Nov 26 01:47 output.list
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc       620 Nov 26 01:47 runtime_log
[2025-11-26 01:47:20] -rw------- 1 boinc boinc    163840 Nov 26 01:47 result.tar.gz
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      8744 Nov 26 01:47 runtime_log.err
[2025-11-26 01:47:20] -rw------- 1 boinc boinc       649 Nov 26 01:47 AtmLDmeD0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjKJKDmXucCbn.diag
[2025-11-26 01:47:20] -rw-r--r-- 1 boinc boinc      8359 Nov 26 01:47 stderr.txt
[2025-11-26 01:47:20] No HITS result produced
[2025-11-26 01:47:20]  *** Contents of shared directory: ***
[2025-11-26 01:47:20] total 403120
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc 412012881 Nov 26 01:43 ATLAS.root_0
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:43 input.tar.gz
[2025-11-26 01:47:20] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:43 start_atlas.sh
[2025-11-26 01:47:20] -rw------- 1 boinc boinc    163840 Nov 26 01:47 result.tar.gz
01:47:22 (2518866): run_atlas exited; CPU time 31.754930
01:47:22 (2518866): called boinc_finish(0)

</stderr_txt>
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