Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:00 (20835): wrapper (7.7.26015): starting
18:51:00 (20835): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 18:51:00] Arguments: --nthreads 8
[2025-11-25 18:51:00] Threads: 8
[2025-11-25 18:51:00] Checking for CVMFS
[2025-11-25 18:51:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:51:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:51:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:51:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:51:00] 2.11.2.0 2860 64956 79308 153302 1 82 18130157 20275201 1 130560 0 15782206 99.801 4419055 29684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 18:51:00] CVMFS is ok
[2025-11-25 18:51:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:51:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:51:00] Further information can be found at the LHC@home message board.
[2025-11-25 18:51:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:51:00] Checking for apptainer binary...
[2025-11-25 18:51:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:51:00] Running /usr/bin/apptainer --version
[2025-11-25 18:51:00] apptainer version 1.3.2-1.el7
[2025-11-25 18:51:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:51:02] c-204-9.aglt2.org
[2025-11-25 18:51:02] apptainer works
[2025-11-25 18:51:02] Set ATHENA_PROC_NUMBER=8
[2025-11-25 18:51:02] Set ATHENA_CORE_NUMBER=8
[2025-11-25 18:51:02] Starting ATLAS job with PandaID=6895358192
[2025-11-25 18:51:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:45:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:45:47] 2025-11-26 13:44:39,154 | INFO     | time since job start (49999s) is within the limit (172800.0s)
[2025-11-26 08:45:47] 2025-11-26 13:44:41,156 | INFO     | time since job start (50001s) is within the limit (172800.0s)
[2025-11-26 08:45:47] 2025-11-26 13:44:41,429 | INFO     | monitor loop #3697: job 0:6895358192 is in state 'finished'
[2025-11-26 08:45:47] 2025-11-26 13:44:41,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,217 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 08:45:47] 2025-11-26 13:44:42,220 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-26 08:45:47] 2025-11-26 13:44:42,222 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895358192/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,223 | INFO     | extracted standard info from prmon json
[2025-11-26 08:45:47] 2025-11-26 13:44:42,223 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:45:47] 2025-11-26 13:44:42,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:45:47] 2025-11-26 13:44:42,237 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:45:47] 2025-11-26 13:44:42,238 | INFO     | sum of square deviations: 170345520502.10983
[2025-11-26 08:45:47] 2025-11-26 13:44:42,252 | INFO     | sum of deviations: 1150826412485.6482
[2025-11-26 08:45:47] 2025-11-26 13:44:42,252 | INFO     | mean x: 1764139662.032967
[2025-11-26 08:45:47] 2025-11-26 13:44:42,252 | INFO     | mean y: 2877248.2722832724
[2025-11-26 08:45:47] 2025-11-26 13:44:42,252 | INFO     | intersect: -11915361120.407907
[2025-11-26 08:45:47] 2025-11-26 13:44:42,253 | INFO     | chi2: 5.503799247277387
[2025-11-26 08:45:47] 2025-11-26 13:44:42,254 | INFO     | sum of square deviations: 167244661294.60425
[2025-11-26 08:45:47] 2025-11-26 13:44:42,268 | INFO     | sum of deviations: 1392995869054.1055
[2025-11-26 08:45:47] 2025-11-26 13:44:42,268 | INFO     | mean x: 1764139509.5331695
[2025-11-26 08:45:47] 2025-11-26 13:44:42,268 | INFO     | mean y: 2889152.792383292
[2025-11-26 08:45:47] 2025-11-26 13:44:42,268 | INFO     | intersect: -14690787943.937307
[2025-11-26 08:45:47] 2025-11-26 13:44:42,269 | INFO     | chi2: 2.9171952724675285
[2025-11-26 08:45:47] 2025-11-26 13:44:42,269 | INFO     | current chi2=2.9171952724675285 (change=46.99669916357136 %)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,270 | INFO     | sum of square deviations: 164181663262.09875
[2025-11-26 08:45:47] 2025-11-26 13:44:42,284 | INFO     | sum of deviations: 1461059154381.1448
[2025-11-26 08:45:47] 2025-11-26 13:44:42,284 | INFO     | mean x: 1764139357.0333745
[2025-11-26 08:45:47] 2025-11-26 13:44:42,284 | INFO     | mean y: 2892536.6242274414
[2025-11-26 08:45:47] 2025-11-26 13:44:42,284 | INFO     | intersect: -15696253799.12066
[2025-11-26 08:45:47] 2025-11-26 13:44:42,285 | INFO     | chi2: 2.585206757898163
[2025-11-26 08:45:47] 2025-11-26 13:44:42,285 | INFO     | current chi2=2.585206757898163 (change=11.380400815216978 %)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,285 | INFO     | right removable region: 808
[2025-11-26 08:45:47] 2025-11-26 13:44:42,286 | INFO     | sum of square deviations: 167244644824.60422
[2025-11-26 08:45:47] 2025-11-26 13:44:42,300 | INFO     | sum of deviations: 920899295340.951
[2025-11-26 08:45:47] 2025-11-26 13:44:42,300 | INFO     | mean x: 1764139814.5331695
[2025-11-26 08:45:47] 2025-11-26 13:44:42,301 | INFO     | mean y: 2888538.6314496314
[2025-11-26 08:45:47] 2025-11-26 13:44:42,301 | INFO     | intersect: -9710995656.526405
[2025-11-26 08:45:47] 2025-11-26 13:44:42,301 | INFO     | chi2: 3.126778487965307
[2025-11-26 08:45:47] 2025-11-26 13:44:42,302 | INFO     | current chi2=3.126778487965307 (change=43.18872568776816 %)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,302 | INFO     | sum of square deviations: 164181630322.09882
[2025-11-26 08:45:47] 2025-11-26 13:44:42,316 | INFO     | sum of deviations: 870573887460.7604
[2025-11-26 08:45:47] 2025-11-26 13:44:42,316 | INFO     | mean x: 1764139967.0333745
[2025-11-26 08:45:47] 2025-11-26 13:44:42,316 | INFO     | mean y: 2891043.1569839306
[2025-11-26 08:45:47] 2025-11-26 13:44:42,317 | INFO     | intersect: -9351469649.401094
[2025-11-26 08:45:47] 2025-11-26 13:44:42,317 | INFO     | chi2: 3.083550186226875
[2025-11-26 08:45:47] 2025-11-26 13:44:42,318 | INFO     | current chi2=3.083550186226875 (change=1.382518841830784 %)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,318 | INFO     | left removable region: 20
[2025-11-26 08:45:47] 2025-11-26 13:44:42,319 | INFO     | sum of square deviations: 151725201206.0749
[2025-11-26 08:45:47] 2025-11-26 13:44:42,331 | INFO     | sum of deviations: 1114933206684.7957
[2025-11-26 08:45:47] 2025-11-26 13:44:42,332 | INFO     | mean x: 1764139936.5342638
[2025-11-26 08:45:47] 2025-11-26 13:44:42,332 | INFO     | mean y: 2909794.8223350253
[2025-11-26 08:45:47] 2025-11-26 13:44:42,332 | INFO     | intersect: -12960646561.312565
[2025-11-26 08:45:47] 2025-11-26 13:44:42,333 | INFO     | chi2: 0.13746598030315488
[2025-11-26 08:45:47] 2025-11-26 13:44:42,333 | INFO     | current memory leak: 7.35 B/s (using 788 data points, chi2=0.14)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,333 | INFO     | could have reported an average CPU frequency of 2177 MHz (31 samples)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,333 | INFO     | ..............................
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . Timing measurements:
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . get job = 0 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . initial setup = 2 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . payload setup = 9 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . stage-in = 0 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . payload execution = 49953 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . stage-out = 3 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,334 | INFO     | . log creation = 0 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,335 | INFO     | ..............................
[2025-11-26 08:45:47] 2025-11-26 13:44:42,447 | INFO     | 
[2025-11-26 08:45:47] 2025-11-26 13:44:42,447 | INFO     | job summary report
[2025-11-26 08:45:47] 2025-11-26 13:44:42,447 | INFO     | --------------------------------------------------
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | PanDA job id: 6895358192
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | task id: 47556137
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | errors: (none)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | pilot state: finished 
[2025-11-26 08:45:47] 2025-11-26 13:44:42,448 | INFO     | transexitcode: 0
[2025-11-26 08:45:47] 2025-11-26 13:44:42,449 | INFO     | exeerrorcode: 0
[2025-11-26 08:45:47] 2025-11-26 13:44:42,449 | INFO     | exeerrordiag: 
[2025-11-26 08:45:47] 2025-11-26 13:44:42,449 | INFO     | exitcode: 0
[2025-11-26 08:45:47] 2025-11-26 13:44:42,449 | INFO     | exitmsg: OK
[2025-11-26 08:45:47] 2025-11-26 13:44:42,449 | INFO     | cpuconsumptiontime: 370333 s
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | nevents: 1000
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | neventsw: 0
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | pid: 31020
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | pgrp: 31020
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | corecount: 8
[2025-11-26 08:45:47] 2025-11-26 13:44:42,450 | INFO     | event service: False
[2025-11-26 08:45:47] 2025-11-26 13:44:42,451 | INFO     | sizes: {0: 2284200, 1: 2284342, 6: 2284604, 11: 2284632, 49966: 2333146, 49967: 2333145, 49972: 2342323, 49975: 2342379, 49985: 2342625}
[2025-11-26 08:45:47] 2025-11-26 13:44:42,451 | INFO     | --------------------------------------------------
[2025-11-26 08:45:47] 2025-11-26 13:44:42,451 | INFO     | 
[2025-11-26 08:45:47] 2025-11-26 13:44:42,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 08:45:47] 2025-11-26 13:44:42,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:45:47] 2025-11-26 13:44:42,484 | INFO     | job 6895358192 has completed (purged errors)
[2025-11-26 08:45:47] 2025-11-26 13:44:42,484 | INFO     | overall cleanup function is called
[2025-11-26 08:45:47] 2025-11-26 13:44:43,531 | INFO     | --- collectZombieJob: --- 10, [31020]
[2025-11-26 08:45:47] 2025-11-26 13:44:43,531 | INFO     | zombie collector waiting for pid 31020
[2025-11-26 08:45:47] 2025-11-26 13:44:43,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:45:47] 2025-11-26 13:44:43,531 | INFO     | collected zombie processes
[2025-11-26 08:45:47] 2025-11-26 13:44:43,532 | INFO     | will attempt to kill all subprocesses of pid=31020
[2025-11-26 08:45:47] 2025-11-26 13:44:43,623 | INFO     | process IDs to be killed: [31020] (in reverse order)
[2025-11-26 08:45:47] 2025-11-26 13:44:43,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:45:47] 2025-11-26 13:44:43,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:45:47] 2025-11-26 13:44:43,686 | INFO     | did not find any defunct processes belonging to 31020
[2025-11-26 08:45:47] 2025-11-26 13:44:43,689 | INFO     | did not find any defunct processes belonging to 31020
[2025-11-26 08:45:47] 2025-11-26 13:44:43,692 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:45:47] 2025-11-26 13:44:43,692 | INFO     | ready for new job
[2025-11-26 08:45:47] 2025-11-26 13:44:43,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:45:47] 2025-11-26 13:44:43,696 | INFO     | ***************************************
[2025-11-26 08:45:47] 2025-11-26 13:44:43,697 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:45:47] 2025-11-26 13:44:43,697 | INFO     | ***************************************
[2025-11-26 08:45:47] 2025-11-26 13:44:43,697 | INFO     | 
[2025-11-26 08:45:47] 2025-11-26 13:44:43,697 | INFO     | architecture information:
[2025-11-26 08:45:47] 2025-11-26 13:44:43,698 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:45:47] 2025-11-26 13:44:43,717 | INFO     | cat /etc/os-release:
[2025-11-26 08:45:47] NAME="CentOS Linux"
[2025-11-26 08:45:47] VERSION="7 (Core)"
[2025-11-26 08:45:47] ID="centos"
[2025-11-26 08:45:47] ID_LIKE="rhel fedora"
[2025-11-26 08:45:47] VERSION_ID="7"
[2025-11-26 08:45:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:45:47] ANSI_COLOR="0;31"
[2025-11-26 08:45:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:45:47] HOME_URL="https://www.centos.org/"
[2025-11-26 08:45:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:45:47] 
[2025-11-26 08:45:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:45:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:45:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:45:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:45:47] 
[2025-11-26 08:45:47] 2025-11-26 13:44:43,718 | INFO     | ***************************************
[2025-11-26 08:45:47] 2025-11-26 13:44:44,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 08:45:47] 2025-11-26 13:44:44,241 | INFO     | sufficient remaining disk space (17450401792 B)
[2025-11-26 08:45:47] 2025-11-26 13:44:44,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:45:47] 2025-11-26 13:44:44,242 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:45:47] 2025-11-26 13:44:44,243 | INFO     | update_server=False
[2025-11-26 08:45:47] 2025-11-26 13:44:44,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:45:47] 2025-11-26 13:44:44,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:45:47] 2025-11-26 13:44:44,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:45:47] 2025-11-26 13:44:44,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:45:47] 2025-11-26 13:44:44,933 | INFO     | aborting loop
[2025-11-26 08:45:47] 2025-11-26 13:44:45,094 | INFO     | all payload control threads have been joined
[2025-11-26 08:45:47] 2025-11-26 13:44:45,165 | INFO     | all data control threads have been joined
[2025-11-26 08:45:47] 2025-11-26 13:44:45,249 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:45,249 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:45,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:45:47] 2025-11-26 13:44:45,387 | INFO     | all job control threads have been joined
[2025-11-26 08:45:47] 2025-11-26 13:44:45,761 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:45,936 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,100 | INFO     | [payload] control thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,171 | INFO     | [data] control thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,302 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,393 | INFO     | [job] control thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,409 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,567 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,601 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,602 | INFO     | [job] validate thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:46,604 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:47,304 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:44:48,250 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:45:47] 2025-11-26 13:45:14,371 | INFO     | PID=24584 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 08:45:47] 2025-11-26 13:45:14,372 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:45:47] 2025-11-26 13:45:14,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:45:47] 2025-11-26 13:45:14,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:45:47] 2025-11-26 13:45:40,834 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:45:47] 2025-11-26 13:45:41,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622541731648)>', '<ExcThread(monitor, started 140622077859584)>']
[2025-11-26 08:45:47] 2025-11-26 13:45:42,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:45:47] 2025-11-26 13:45:42,504 | INFO     | [monitor] control thread has ended
[2025-11-26 08:45:47] 2025-11-26 13:45:46,928 | INFO     | all workflow threads have been joined
[2025-11-26 08:45:47] 2025-11-26 13:45:46,929 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:45:47] 2025-11-26 13:45:46,929 | INFO     | traces error code: 0
[2025-11-26 08:45:47] 2025-11-26 13:45:46,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:45:47] 2025-11-26 13:45:47,043 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:45:47] 2025-11-26 13:45:47,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:45:47] 2025-11-26 13:45:47,053 [wrapper] pilotpid: 24584
[2025-11-26 08:45:47] 2025-11-26 13:45:47,058 [wrapper] Pilot exit status: 0
[2025-11-26 08:45:47] 2025-11-26 13:45:47,074 [wrapper] pandaids: 6895358192
[2025-11-26 08:45:47] 2025-11-26 13:45:47,129 [wrapper] cleanup supervisor_pilot 18861 24585
[2025-11-26 08:45:47] 2025-11-26 13:45:47,133 [wrapper] Test setup, not cleaning
[2025-11-26 08:45:47] 2025-11-26 13:45:47,137 [wrapper] apfmon messages muted
[2025-11-26 08:45:47] 2025-11-26 13:45:47,141 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:45:47] 2025-11-26 13:45:47,145 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:45:47]  *** Error codes and diagnostics ***
[2025-11-26 08:45:47]     "exeErrorCode": 0,
[2025-11-26 08:45:47]     "exeErrorDiag": "",
[2025-11-26 08:45:47]     "pilotErrorCode": 0,
[2025-11-26 08:45:47]     "pilotErrorDiag": "",
[2025-11-26 08:45:47]  *** Listing of results directory ***
[2025-11-26 08:45:47] total 1334664
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:14 pilot3.tar.gz
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 07:47 queuedata.json
[2025-11-26 08:45:47] -rwx------ 1 boincer umatlas     36292 Nov 23 07:47 runpilot2-wrapper.sh
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas       100 Nov 25 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:45:47] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 18:50 run_atlas
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas       105 Nov 25 18:50 job.xml
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas 410904764 Nov 25 18:51 EVNT.47483658._000732.pool.root.1
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:51 start_atlas.sh
[2025-11-26 08:45:47] drwxrwx--x 2 boincer umatlas      4096 Nov 25 18:51 shared
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 18:51 input.tar.gz
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas         0 Nov 25 18:51 boinc_lockfile
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 18:51 pandaJob.out
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas        57 Nov 25 18:51 setup.sh.local
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas    991877 Nov 25 18:51 agis_schedconf.cvmfs.json
[2025-11-26 08:45:47] drwx------ 5 boincer umatlas      4096 Nov 25 18:51 pilot3
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas       533 Nov 26 08:33 boinc_task_state.xml
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas      5911 Nov 26 08:37 init_data.xml
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas 933947995 Nov 26 08:43 HITS.47556137._007278.pool.root.1
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas        95 Nov 26 08:44 pilot_heartbeat.json
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas      1077 Nov 26 08:44 memory_monitor_summary.json
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas   1516240 Nov 26 08:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas   2055942 Nov 26 08:44 log.47556137._007278.job.log.tgz.1
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas      8658 Nov 26 08:44 heartbeat.json
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 08:45 boinc_mmap_file
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas        29 Nov 26 08:45 wrapper_checkpoint.txt
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas      4746 Nov 26 08:45 pilotlog.txt
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas   6907666 Nov 26 08:45 log.47556137._007278.job.log.1
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas       353 Nov 26 08:45 output.list
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas       620 Nov 26 08:45 runtime_log
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas   8980480 Nov 26 08:45 result.tar.gz
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas       669 Nov 26 08:45 zQJNDm5fOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqtKKDmxjmprn.diag
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 08:45 runtime_log.err
[2025-11-26 08:45:47] -rw-r--r-- 1 boincer umatlas     21332 Nov 26 08:45 stderr.txt
[2025-11-26 08:45:47] HITS file was successfully produced:
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas 933947995 Nov 26 08:43 shared/HITS.pool.root.1
[2025-11-26 08:45:47]  *** Contents of shared directory: ***
[2025-11-26 08:45:47] total 1322708
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas 410904764 Nov 25 18:51 ATLAS.root_0
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:51 start_atlas.sh
[2025-11-26 08:45:47] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 18:51 input.tar.gz
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas 933947995 Nov 26 08:43 HITS.pool.root.1
[2025-11-26 08:45:47] -rw------- 1 boincer umatlas   8980480 Nov 26 08:45 result.tar.gz
08:45:48 (20835): run_atlas exited; CPU time 360308.703763
08:45:48 (20835): called boinc_finish(0)

</stderr_txt>
]]>

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