Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:18 (1463163): wrapper (7.7.26015): starting
19:03:18 (1463163): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:03:18] Arguments: --nthreads 8
[2025-11-25 19:03:18] Threads: 8
[2025-11-25 19:03:18] Checking for CVMFS
[2025-11-25 19:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:03:19] 2.13.3.0 12388 29258 225744 153302 3 367 29590196 32935937 35711 16776704 0 116591090 99.496 138165785 36479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:03:19] CVMFS is ok
[2025-11-25 19:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:03:19] Further information can be found at the LHC@home message board.
[2025-11-25 19:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:03:19] Checking for apptainer binary...
[2025-11-25 19:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:03:19] Running /usr/bin/apptainer --version
[2025-11-25 19:03:19] apptainer version 1.4.4-1.el9
[2025-11-25 19:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:03:19] c7-4-31.aglt2.org
[2025-11-25 19:03:19] apptainer works
[2025-11-25 19:03:19] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:03:19] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:03:19] Starting ATLAS job with PandaID=6896451285
[2025-11-25 19:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:37:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | this job has now completed (state=finished)
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | log transfer has been attempted: DONE
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | job 6896451285 has finished - writing final server update
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 13:37:53] 2025-11-26 18:37:08,031 | INFO     | executing command: lscpu
[2025-11-26 13:37:53] 2025-11-26 18:37:08,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 13:37:53] 2025-11-26 18:37:09,641 | INFO     | time since job start (66805s) is within the limit (172800.0s)
[2025-11-26 13:37:53] 2025-11-26 18:37:10,023 | INFO     | monitor loop #3664: job 0:6896451285 is in state 'finished'
[2025-11-26 13:37:53] 2025-11-26 18:37:10,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:37:53] 2025-11-26 18:37:11,647 | INFO     | time since job start (66807s) is within the limit (172800.0s)
[2025-11-26 13:37:53] 2025-11-26 18:37:12,528 | INFO     | monitor loop #3665: job 0:6896451285 is in state 'finished'
[2025-11-26 13:37:53] 2025-11-26 18:37:12,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:37:53] 2025-11-26 18:37:13,655 | INFO     | time since job start (66809s) is within the limit (172800.0s)
[2025-11-26 13:37:53] 2025-11-26 18:37:15,035 | INFO     | monitor loop #3666: job 0:6896451285 is in state 'finished'
[2025-11-26 13:37:53] 2025-11-26 18:37:15,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:37:53] 2025-11-26 18:37:15,662 | INFO     | time since job start (66811s) is within the limit (172800.0s)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,347 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 13:37:53] 2025-11-26 18:37:16,353 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3041.3729687500004
[2025-11-26 13:37:53] 2025-11-26 18:37:16,370 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6896451285/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,371 | INFO     | extracted standard info from prmon json
[2025-11-26 13:37:53] 2025-11-26 18:37:16,371 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:37:53] 2025-11-26 18:37:16,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:37:53] 2025-11-26 18:37:16,403 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:37:53] 2025-11-26 18:37:16,405 | INFO     | sum of square deviations: 406000281827.511
[2025-11-26 13:37:53] 2025-11-26 18:37:16,481 | INFO     | sum of deviations: 18141916488687.562
[2025-11-26 13:37:53] 2025-11-26 18:37:16,486 | INFO     | mean x: 1764148822.3519197
[2025-11-26 13:37:53] 2025-11-26 18:37:16,486 | INFO     | mean y: 3554643.284277879
[2025-11-26 13:37:53] 2025-11-26 18:37:16,486 | INFO     | intersect: -78826539918.87262
[2025-11-26 13:37:53] 2025-11-26 18:37:16,487 | INFO     | chi2: 31.06722505820292
[2025-11-26 13:37:53] 2025-11-26 18:37:16,488 | INFO     | sum of square deviations: 400459121277.07605
[2025-11-26 13:37:53] 2025-11-26 18:37:16,549 | INFO     | sum of deviations: 18582701349868.992
[2025-11-26 13:37:53] 2025-11-26 18:37:16,550 | INFO     | mean x: 1764148669.8549128
[2025-11-26 13:37:53] 2025-11-26 18:37:16,550 | INFO     | mean y: 3566770.943067034
[2025-11-26 13:37:53] 2025-11-26 18:37:16,550 | INFO     | intersect: -81859090681.17747
[2025-11-26 13:37:53] 2025-11-26 18:37:16,551 | INFO     | chi2: 28.394186025145437
[2025-11-26 13:37:53] 2025-11-26 18:37:16,551 | INFO     | current chi2=28.394186025145437 (change=8.60404824714687 %)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,551 | INFO     | right removable region: 1088
[2025-11-26 13:37:53] 2025-11-26 18:37:16,552 | INFO     | sum of square deviations: 400458619246.3668
[2025-11-26 13:37:53] 2025-11-26 18:37:16,635 | INFO     | sum of deviations: 17637899088443.137
[2025-11-26 13:37:53] 2025-11-26 18:37:16,635 | INFO     | mean x: 1764148974.8558311
[2025-11-26 13:37:53] 2025-11-26 18:37:16,635 | INFO     | mean y: 3568510.402203857
[2025-11-26 13:37:53] 2025-11-26 18:37:16,635 | INFO     | intersect: -77697047982.87073
[2025-11-26 13:37:53] 2025-11-26 18:37:16,640 | INFO     | chi2: 27.551147681012708
[2025-11-26 13:37:53] 2025-11-26 18:37:16,640 | INFO     | current chi2=27.551147681012708 (change=11.317642211697416 %)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,640 | INFO     | left removable region: 10
[2025-11-26 13:37:53] 2025-11-26 18:37:16,641 | INFO     | sum of square deviations: 388445678090.34875
[2025-11-26 13:37:53] 2025-11-26 18:37:16,764 | INFO     | sum of deviations: 17850763742068.91
[2025-11-26 13:37:53] 2025-11-26 18:37:16,765 | INFO     | mean x: 1764148944.3599257
[2025-11-26 13:37:53] 2025-11-26 18:37:16,765 | INFO     | mean y: 3586684.1781076067
[2025-11-26 13:37:53] 2025-11-26 18:37:16,765 | INFO     | intersect: -81066709081.25633
[2025-11-26 13:37:53] 2025-11-26 18:37:16,766 | INFO     | chi2: 24.647735659665297
[2025-11-26 13:37:53] 2025-11-26 18:37:16,766 | INFO     | current memory leak: 45.95 B/s (using 1078 data points, chi2=24.65)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | could have reported an average CPU frequency of 3112 MHz (40 samples)
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | ..............................
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . Timing measurements:
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . get job = 0 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . initial setup = 3 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . payload setup = 18 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . stage-in = 0 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,768 | INFO     | . payload execution = 66741 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,781 | INFO     | . stage-out = 5 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,781 | INFO     | . log creation = 1 s
[2025-11-26 13:37:53] 2025-11-26 18:37:16,781 | INFO     | ..............................
[2025-11-26 13:37:53] 2025-11-26 18:37:17,032 | INFO     | 
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | job summary report
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | --------------------------------------------------
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | PanDA job id: 6896451285
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | task id: 47556149
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | errors: (none)
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | pilot state: finished 
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | transexitcode: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | exeerrorcode: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:17,035 | INFO     | exeerrordiag: 
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | exitcode: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | exitmsg: OK
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | cpuconsumptiontime: 212694 s
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | nevents: 1000
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | neventsw: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | pid: 1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | pgrp: 1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | corecount: 8
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | event service: False
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | sizes: {0: 2284309, 11: 2284599, 22: 2284599, 66764: 2340252, 66765: 2340251, 66770: 2349301, 66771: 2349485, 66781: 2349731}
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | --------------------------------------------------
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | 
[2025-11-26 13:37:53] 2025-11-26 18:37:17,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | job 6896451285 has completed (purged errors)
[2025-11-26 13:37:53] 2025-11-26 18:37:17,080 | INFO     | overall cleanup function is called
[2025-11-26 13:37:53] 2025-11-26 18:37:18,118 | INFO     | --- collectZombieJob: --- 10, [1484234]
[2025-11-26 13:37:53] 2025-11-26 18:37:18,119 | INFO     | zombie collector waiting for pid 1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:18,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:37:53] 2025-11-26 18:37:18,119 | INFO     | collected zombie processes
[2025-11-26 13:37:53] 2025-11-26 18:37:18,119 | INFO     | will attempt to kill all subprocesses of pid=1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:19,800 | INFO     | process IDs to be killed: [1484234] (in reverse order)
[2025-11-26 13:37:53] 2025-11-26 18:37:20,026 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:37:53] 2025-11-26 18:37:20,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:37:53] 2025-11-26 18:37:20,142 | INFO     | did not find any defunct processes belonging to 1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:20,216 | INFO     | did not find any defunct processes belonging to 1484234
[2025-11-26 13:37:53] 2025-11-26 18:37:20,221 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:37:53] 2025-11-26 18:37:20,221 | INFO     | ready for new job
[2025-11-26 13:37:53] 2025-11-26 18:37:20,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:37:53] 2025-11-26 18:37:20,227 | INFO     | ***************************************
[2025-11-26 13:37:53] 2025-11-26 18:37:20,227 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:37:53] 2025-11-26 18:37:20,227 | INFO     | ***************************************
[2025-11-26 13:37:53] 2025-11-26 18:37:20,227 | INFO     | 
[2025-11-26 13:37:53] 2025-11-26 18:37:20,233 | INFO     | architecture information:
[2025-11-26 13:37:53] 2025-11-26 18:37:20,237 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:37:53] 2025-11-26 18:37:20,265 | INFO     | cat /etc/os-release:
[2025-11-26 13:37:53] NAME="CentOS Linux"
[2025-11-26 13:37:53] VERSION="7 (Core)"
[2025-11-26 13:37:53] ID="centos"
[2025-11-26 13:37:53] ID_LIKE="rhel fedora"
[2025-11-26 13:37:53] VERSION_ID="7"
[2025-11-26 13:37:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:37:53] ANSI_COLOR="0;31"
[2025-11-26 13:37:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:37:53] HOME_URL="https://www.centos.org/"
[2025-11-26 13:37:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:37:53] 
[2025-11-26 13:37:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:37:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:37:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:37:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:37:53] 
[2025-11-26 13:37:53] 2025-11-26 18:37:20,265 | INFO     | ***************************************
[2025-11-26 13:37:53] 2025-11-26 18:37:20,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 13:37:53] 2025-11-26 18:37:20,811 | INFO     | sufficient remaining disk space (68505567232 B)
[2025-11-26 13:37:53] 2025-11-26 18:37:20,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:37:53] 2025-11-26 18:37:20,811 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:37:53] 2025-11-26 18:37:20,811 | INFO     | update_server=False
[2025-11-26 13:37:53] 2025-11-26 18:37:20,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:37:53] 2025-11-26 18:37:21,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:37:53] 2025-11-26 18:37:21,106 | INFO     | aborting loop
[2025-11-26 13:37:53] 2025-11-26 18:37:21,183 | INFO     | all payload control threads have been joined
[2025-11-26 13:37:53] 2025-11-26 18:37:21,583 | INFO     | all job control threads have been joined
[2025-11-26 13:37:53] 2025-11-26 18:37:21,818 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:21,860 | INFO     | all data control threads have been joined
[2025-11-26 13:37:53] 2025-11-26 18:37:22,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:37:53] 2025-11-26 18:37:22,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:37:53] 2025-11-26 18:37:22,112 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,140 | INFO     | [job] validate thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,190 | INFO     | [payload] control thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,346 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:37:53] 2025-11-26 18:37:22,590 | INFO     | [job] control thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,641 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,707 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,714 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,822 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,865 | INFO     | [data] control thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:22,917 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:23,070 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:24,042 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:26,579 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:37:53] 2025-11-26 18:37:46,518 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:37:53] 2025-11-26 18:37:47,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348406957888)>', '<ExcThread(monitor, started 140347787179776)>']
[2025-11-26 13:37:53] 2025-11-26 18:37:49,610 | INFO     | PID=1473038 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:37:53] 2025-11-26 18:37:49,610 | INFO     | .. there are 44 such processes running
[2025-11-26 13:37:53] 2025-11-26 18:37:49,611 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:37:53] 2025-11-26 18:37:49,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:37:53] 2025-11-26 18:37:49,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:37:53] 2025-11-26 18:37:49,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:37:53] 2025-11-26 18:37:49,611 | INFO     | [monitor] control thread has ended
[2025-11-26 13:37:53] 2025-11-26 18:37:52,567 | INFO     | all workflow threads have been joined
[2025-11-26 13:37:53] 2025-11-26 18:37:52,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:37:53] 2025-11-26 18:37:52,568 | INFO     | traces error code: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:52,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:37:53] 2025-11-26 18:37:52,963 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:37:53] 2025-11-26 18:37:52,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:37:53] 2025-11-26 18:37:52,974 [wrapper] pilotpid: 1473038
[2025-11-26 13:37:53] 2025-11-26 18:37:52,978 [wrapper] Pilot exit status: 0
[2025-11-26 13:37:53] 2025-11-26 18:37:52,994 [wrapper] pandaids: 6896451285
[2025-11-26 13:37:53] 2025-11-26 18:37:53,141 [wrapper] cleanup supervisor_pilot 2463972 1473039
[2025-11-26 13:37:53] 2025-11-26 18:37:53,156 [wrapper] Test setup, not cleaning
[2025-11-26 13:37:53] 2025-11-26 18:37:53,159 [wrapper] apfmon messages muted
[2025-11-26 13:37:53] 2025-11-26 18:37:53,163 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:37:53] 2025-11-26 18:37:53,171 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:37:53]  *** Error codes and diagnostics ***
[2025-11-26 13:37:53]     "exeErrorCode": 0,
[2025-11-26 13:37:53]     "exeErrorDiag": "",
[2025-11-26 13:37:53]     "pilotErrorCode": 0,
[2025-11-26 13:37:53]     "pilotErrorDiag": "",
[2025-11-26 13:37:53]  *** Listing of results directory ***
[2025-11-26 13:37:53] total 1318600
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:30 queuedata.json
[2025-11-26 13:37:53] -rwx------. 1 boincer umatlas     36292 Nov 24 23:34 runpilot2-wrapper.sh
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:37:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:03 run_atlas
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:03 job.xml
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas 409592179 Nov 25 19:03 EVNT.47483658._001513.pool.root.1
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:03 start_atlas.sh
[2025-11-26 13:37:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:03 shared
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 19:03 input.tar.gz
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:03 boinc_lockfile
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 19:03 pandaJob.out
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas        57 Nov 25 19:03 setup.sh.local
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas    991877 Nov 25 19:03 agis_schedconf.cvmfs.json
[2025-11-26 13:37:53] drwx------. 5 boincer umatlas      4096 Nov 25 19:03 pilot3
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:29 boinc_task_state.xml
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas 916466401 Nov 26 13:36 HITS.47556149._004991.pool.root.1
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas        95 Nov 26 13:36 pilot_heartbeat.json
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas      1073 Nov 26 13:36 memory_monitor_summary.json
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 13:37 init_data.xml
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas   2160618 Nov 26 13:37 log.47556149._004991.job.log.tgz.1
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas      8629 Nov 26 13:37 heartbeat.json
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:37 boinc_mmap_file
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:37 wrapper_checkpoint.txt
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas      4824 Nov 26 13:37 pilotlog.txt
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas   7971591 Nov 26 13:37 log.47556149._004991.job.log.1
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas       353 Nov 26 13:37 output.list
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:37 runtime_log
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas  10147840 Nov 26 13:37 result.tar.gz
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas       664 Nov 26 13:37 zePLDmdwzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn7LKDmDi97Un.diag
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 13:37 runtime_log.err
[2025-11-26 13:37:53] -rw-r--r--. 1 boincer umatlas     21768 Nov 26 13:37 stderr.txt
[2025-11-26 13:37:53] HITS file was successfully produced:
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas 916466401 Nov 26 13:36 shared/HITS.pool.root.1
[2025-11-26 13:37:53]  *** Contents of shared directory: ***
[2025-11-26 13:37:53] total 1305500
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas 409592179 Nov 25 19:03 ATLAS.root_0
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:03 start_atlas.sh
[2025-11-26 13:37:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 19:03 input.tar.gz
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas 916466401 Nov 26 13:36 HITS.pool.root.1
[2025-11-26 13:37:53] -rw-------. 1 boincer umatlas  10147840 Nov 26 13:37 result.tar.gz
13:37:55 (1463163): run_atlas exited; CPU time 214235.601594
13:37:55 (1463163): called boinc_finish(0)

</stderr_txt>
]]>

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