Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:10 (8765): wrapper (7.7.26015): starting
19:02:10 (8765): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:02:10] Arguments: --nthreads 8
[2025-11-25 19:02:10] Threads: 8
[2025-11-25 19:02:10] Checking for CVMFS
[2025-11-25 19:02:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:02:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:02:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:02:11] 2.11.2.0 2856 143973 84064 153302 3 82 16503910 20275200 1 130560 0 52894044 99.954 5744766 33847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:02:11] CVMFS is ok
[2025-11-25 19:02:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:02:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:02:11] Further information can be found at the LHC@home message board.
[2025-11-25 19:02:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:02:11] Checking for apptainer binary...
[2025-11-25 19:02:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:02:11] Running /usr/bin/apptainer --version
[2025-11-25 19:02:11] apptainer version 1.3.2-1.el7
[2025-11-25 19:02:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:02:13] c-115-6.aglt2.org
[2025-11-25 19:02:13] apptainer works
[2025-11-25 19:02:13] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:02:13] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:02:13] Starting ATLAS job with PandaID=6895884158
[2025-11-25 19:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:10:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:10:01] 2025-11-26 11:09:29,302 | WARNING  | standard memory fields were not found in memory monitor json (or json doesn't exist yet): 'totRCHAR'
[2025-11-26 06:10:01] 2025-11-26 11:09:29,309 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:10:01] 2025-11-26 11:09:29,309 | INFO     | sum of square deviations: 23972680244.828598
[2025-11-26 06:10:01] 2025-11-26 11:09:29,313 | INFO     | sum of deviations: 461786742788.1948
[2025-11-26 06:10:01] 2025-11-26 11:09:29,313 | INFO     | mean x: 1764128345.1384976
[2025-11-26 06:10:01] 2025-11-26 11:09:29,313 | INFO     | mean y: 3235323.335680751
[2025-11-26 06:10:01] 2025-11-26 11:09:29,314 | INFO     | intersect: -33979242816.027653
[2025-11-26 06:10:01] 2025-11-26 11:09:29,314 | INFO     | chi2: 2.5348144907626486
[2025-11-26 06:10:01] 2025-11-26 11:09:29,315 | INFO     | sum of square deviations: 23138491182.840958
[2025-11-26 06:10:01] 2025-11-26 11:09:29,318 | INFO     | sum of deviations: 452124325560.6864
[2025-11-26 06:10:01] 2025-11-26 11:09:29,319 | INFO     | mean x: 1764128192.6413302
[2025-11-26 06:10:01] 2025-11-26 11:09:29,319 | INFO     | mean y: 3233556.8456057007
[2025-11-26 06:10:01] 2025-11-26 11:09:29,319 | INFO     | intersect: -34467694689.85192
[2025-11-26 06:10:01] 2025-11-26 11:09:29,320 | INFO     | chi2: 2.5331507469741497
[2025-11-26 06:10:01] 2025-11-26 11:09:29,320 | INFO     | current chi2=2.5331507469741497 (change=0.06563572184717997 %)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,320 | INFO     | right removable region: 420
[2025-11-26 06:10:01] 2025-11-26 11:09:29,320 | INFO     | sum of square deviations: 23138376990.265976
[2025-11-26 06:10:01] 2025-11-26 11:09:29,324 | INFO     | sum of deviations: 327585624017.6437
[2025-11-26 06:10:01] 2025-11-26 11:09:29,324 | INFO     | mean x: 1764128497.6460807
[2025-11-26 06:10:01] 2025-11-26 11:09:29,324 | INFO     | mean y: 3259781.4204275534
[2025-11-26 06:10:01] 2025-11-26 11:09:29,325 | INFO     | intersect: -24972698341.82288
[2025-11-26 06:10:01] 2025-11-26 11:09:29,325 | INFO     | chi2: 0.0921226560180242
[2025-11-26 06:10:01] 2025-11-26 11:09:29,325 | INFO     | current chi2=0.0921226560180242 (change=96.36570422199586 %)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,326 | INFO     | sum of square deviations: 22323681057.459118
[2025-11-26 06:10:01] 2025-11-26 11:09:29,329 | INFO     | sum of deviations: 302276810722.53827
[2025-11-26 06:10:01] 2025-11-26 11:09:29,329 | INFO     | mean x: 1764128650.1514423
[2025-11-26 06:10:01] 2025-11-26 11:09:29,330 | INFO     | mean y: 3264514.769230769
[2025-11-26 06:10:01] 2025-11-26 11:09:29,330 | INFO     | intersect: -23884157129.514446
[2025-11-26 06:10:01] 2025-11-26 11:09:29,330 | INFO     | chi2: 0.06563189792926115
[2025-11-26 06:10:01] 2025-11-26 11:09:29,330 | INFO     | current chi2=0.06563189792926115 (change=28.755964313035026 %)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,331 | INFO     | sum of square deviations: 21528359700.93913
[2025-11-26 06:10:01] 2025-11-26 11:09:29,334 | INFO     | sum of deviations: 279015097365.20667
[2025-11-26 06:10:01] 2025-11-26 11:09:29,334 | INFO     | mean x: 1764128802.6545012
[2025-11-26 06:10:01] 2025-11-26 11:09:29,335 | INFO     | mean y: 3268975.3746958636
[2025-11-26 06:10:01] 2025-11-26 11:09:29,335 | INFO     | intersect: -22860459449.59858
[2025-11-26 06:10:01] 2025-11-26 11:09:29,335 | INFO     | chi2: 0.04354411582935544
[2025-11-26 06:10:01] 2025-11-26 11:09:29,335 | INFO     | current chi2=0.04354411582935544 (change=33.6540353041629 %)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,336 | INFO     | sum of square deviations: 20752180297.224106
[2025-11-26 06:10:01] 2025-11-26 11:09:29,339 | INFO     | sum of deviations: 260206455376.5345
[2025-11-26 06:10:01] 2025-11-26 11:09:29,339 | INFO     | mean x: 1764128955.1551723
[2025-11-26 06:10:01] 2025-11-26 11:09:29,340 | INFO     | mean y: 3272669.4359605913
[2025-11-26 06:10:01] 2025-11-26 11:09:29,340 | INFO     | intersect: -22116703914.87694
[2025-11-26 06:10:01] 2025-11-26 11:09:29,340 | INFO     | chi2: 0.03304888173375714
[2025-11-26 06:10:01] 2025-11-26 11:09:29,340 | INFO     | current chi2=0.03304888173375714 (change=24.102531181774268 %)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,340 | INFO     | left removable region: 40
[2025-11-26 06:10:01] 2025-11-26 11:09:29,341 | INFO     | sum of square deviations: 17015214973.884256
[2025-11-26 06:10:01] 2025-11-26 11:09:29,344 | INFO     | sum of deviations: 195602226653.2263
[2025-11-26 06:10:01] 2025-11-26 11:09:29,344 | INFO     | mean x: 1764129382.163158
[2025-11-26 06:10:01] 2025-11-26 11:09:29,344 | INFO     | mean y: 3283111.544736842
[2025-11-26 06:10:01] 2025-11-26 11:09:29,344 | INFO     | intersect: -20276662559.733585
[2025-11-26 06:10:01] 2025-11-26 11:09:29,345 | INFO     | chi2: 0.014533057527773693
[2025-11-26 06:10:01] 2025-11-26 11:09:29,345 | INFO     | current memory leak: 11.50 B/s (using 380 data points, chi2=0.01)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,345 | INFO     | could have reported an average CPU frequency of 2388 MHz (25 samples)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | ..............................
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . Timing measurements:
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . get job = 0 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . initial setup = 2 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . payload setup = 8 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . stage-in = 0 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . payload execution = 39917 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,346 | INFO     | . stage-out = 3 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,347 | INFO     | . log creation = 0 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,347 | INFO     | ..............................
[2025-11-26 06:10:01] 2025-11-26 11:09:29,432 | INFO     | 
[2025-11-26 06:10:01] 2025-11-26 11:09:29,432 | INFO     | job summary report
[2025-11-26 06:10:01] 2025-11-26 11:09:29,432 | INFO     | --------------------------------------------------
[2025-11-26 06:10:01] 2025-11-26 11:09:29,433 | INFO     | PanDA job id: 6895884158
[2025-11-26 06:10:01] 2025-11-26 11:09:29,433 | INFO     | task id: 47556149
[2025-11-26 06:10:01] 2025-11-26 11:09:29,433 | INFO     | errors: (none)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:10:01] 2025-11-26 11:09:29,433 | INFO     | pilot state: finished 
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | transexitcode: 0
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | exeerrorcode: 0
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | exeerrordiag: 
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | exitcode: 0
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | exitmsg: OK
[2025-11-26 06:10:01] 2025-11-26 11:09:29,434 | INFO     | cpuconsumptiontime: 309994 s
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | nevents: 1000
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | neventsw: 0
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | pid: 18898
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | pgrp: 18898
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | corecount: 8
[2025-11-26 06:10:01] 2025-11-26 11:09:29,435 | INFO     | event service: False
[2025-11-26 06:10:01] 2025-11-26 11:09:29,436 | INFO     | sizes: {0: 2284258, 6: 2284520, 11: 2284548, 39990: 2328051, 39991: 2328050, 39994: 2337100, 39997: 2337284, 40003: 2337594}
[2025-11-26 06:10:01] 2025-11-26 11:09:29,436 | INFO     | --------------------------------------------------
[2025-11-26 06:10:01] 2025-11-26 11:09:29,436 | INFO     | 
[2025-11-26 06:10:01] 2025-11-26 11:09:29,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 06:10:01] 2025-11-26 11:09:29,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:10:01] 2025-11-26 11:09:29,469 | INFO     | job 6895884158 has completed (purged errors)
[2025-11-26 06:10:01] 2025-11-26 11:09:29,469 | INFO     | overall cleanup function is called
[2025-11-26 06:10:01] 2025-11-26 11:09:30,484 | INFO     | --- collectZombieJob: --- 10, [18898]
[2025-11-26 06:10:01] 2025-11-26 11:09:30,485 | INFO     | zombie collector waiting for pid 18898
[2025-11-26 06:10:01] 2025-11-26 11:09:30,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:10:01] 2025-11-26 11:09:30,485 | INFO     | collected zombie processes
[2025-11-26 06:10:01] 2025-11-26 11:09:30,485 | INFO     | will attempt to kill all subprocesses of pid=18898
[2025-11-26 06:10:01] 2025-11-26 11:09:30,576 | INFO     | process IDs to be killed: [18898] (in reverse order)
[2025-11-26 06:10:01] 2025-11-26 11:09:30,632 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:10:01] 2025-11-26 11:09:30,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:10:01] 2025-11-26 11:09:30,637 | INFO     | did not find any defunct processes belonging to 18898
[2025-11-26 06:10:01] 2025-11-26 11:09:30,641 | INFO     | did not find any defunct processes belonging to 18898
[2025-11-26 06:10:01] 2025-11-26 11:09:30,644 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:10:01] 2025-11-26 11:09:30,644 | INFO     | ready for new job
[2025-11-26 06:10:01] 2025-11-26 11:09:30,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:10:01] 2025-11-26 11:09:30,647 | INFO     | ***************************************
[2025-11-26 06:10:01] 2025-11-26 11:09:30,647 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:10:01] 2025-11-26 11:09:30,647 | INFO     | ***************************************
[2025-11-26 06:10:01] 2025-11-26 11:09:30,647 | INFO     | 
[2025-11-26 06:10:01] 2025-11-26 11:09:30,648 | INFO     | architecture information:
[2025-11-26 06:10:01] 2025-11-26 11:09:30,649 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:10:01] 2025-11-26 11:09:30,667 | INFO     | cat /etc/os-release:
[2025-11-26 06:10:01] NAME="CentOS Linux"
[2025-11-26 06:10:01] VERSION="7 (Core)"
[2025-11-26 06:10:01] ID="centos"
[2025-11-26 06:10:01] ID_LIKE="rhel fedora"
[2025-11-26 06:10:01] VERSION_ID="7"
[2025-11-26 06:10:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:10:01] ANSI_COLOR="0;31"
[2025-11-26 06:10:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:10:01] HOME_URL="https://www.centos.org/"
[2025-11-26 06:10:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:10:01] 
[2025-11-26 06:10:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:10:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:10:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:10:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:10:01] 
[2025-11-26 06:10:01] 2025-11-26 11:09:30,668 | INFO     | ***************************************
[2025-11-26 06:10:01] 2025-11-26 11:09:31,171 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 06:10:01] 2025-11-26 11:09:31,192 | INFO     | sufficient remaining disk space (17479761920 B)
[2025-11-26 06:10:01] 2025-11-26 11:09:31,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:10:01] 2025-11-26 11:09:31,192 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:10:01] 2025-11-26 11:09:31,193 | INFO     | update_server=False
[2025-11-26 06:10:01] 2025-11-26 11:09:31,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:10:01] 2025-11-26 11:09:31,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:10:01] 2025-11-26 11:09:31,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:10:01] 2025-11-26 11:09:31,671 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 06:10:01] 2025-11-26 11:09:31,672 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 06:10:01] 2025-11-26 11:09:31,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:10:01] 2025-11-26 11:09:31,672 | INFO     | will abort loop
[2025-11-26 06:10:01] 2025-11-26 11:09:32,087 | INFO     | all payload control threads have been joined
[2025-11-26 06:10:01] 2025-11-26 11:09:32,197 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:32,198 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:32,227 | INFO     | all job control threads have been joined
[2025-11-26 06:10:01] 2025-11-26 11:09:32,237 | INFO     | all data control threads have been joined
[2025-11-26 06:10:01] 2025-11-26 11:09:32,451 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:32,678 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:32,898 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,093 | INFO     | [payload] control thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,215 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,233 | INFO     | [job] control thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,243 | INFO     | [data] control thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,404 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,409 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,413 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,508 | INFO     | [job] validate thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,625 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:33,672 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:34,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:10:01] 2025-11-26 11:09:35,888 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:10:01] 2025-11-26 11:09:38,179 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:10:01] 2025-11-26 11:09:38,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954032064320)>', '<ExcThread(monitor, started 139953430316800)>']
[2025-11-26 06:10:01] 2025-11-26 11:09:43,304 | INFO     | all workflow threads have been joined
[2025-11-26 06:10:01] 2025-11-26 11:09:43,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:10:01] 2025-11-26 11:09:43,305 | INFO     | traces error code: 0
[2025-11-26 06:10:01] 2025-11-26 11:09:43,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:10:01] 2025-11-26 11:10:01,094 | INFO     | PID=12445 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:10:01] 2025-11-26 11:10:01,094 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:10:01] 2025-11-26 11:10:01,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:10:01] 2025-11-26 11:10:01,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:10:01] 2025-11-26 11:10:01,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:10:01] 2025-11-26 11:10:01,095 | INFO     | [monitor] control thread has ended
[2025-11-26 06:10:01] 2025-11-26 11:10:01,197 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:10:01] 2025-11-26 11:10:01,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:10:01] 2025-11-26 11:10:01,207 [wrapper] pilotpid: 12445
[2025-11-26 06:10:01] 2025-11-26 11:10:01,212 [wrapper] Pilot exit status: 0
[2025-11-26 06:10:01] 2025-11-26 11:10:01,229 [wrapper] pandaids: 6895884158
[2025-11-26 06:10:01] 2025-11-26 11:10:01,275 [wrapper] cleanup supervisor_pilot 30384 12446
[2025-11-26 06:10:01] 2025-11-26 11:10:01,281 [wrapper] Test setup, not cleaning
[2025-11-26 06:10:01] 2025-11-26 11:10:01,286 [wrapper] apfmon messages muted
[2025-11-26 06:10:01] 2025-11-26 11:10:01,291 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:10:01] 2025-11-26 11:10:01,296 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:10:01]  *** Error codes and diagnostics ***
[2025-11-26 06:10:01]     "exeErrorCode": 0,
[2025-11-26 06:10:01]     "exeErrorDiag": "",
[2025-11-26 06:10:01]     "pilotErrorCode": 0,
[2025-11-26 06:10:01]     "pilotErrorDiag": "",
[2025-11-26 06:10:01]  *** Listing of results directory ***
[2025-11-26 06:10:01] total 1303892
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 12:01 queuedata.json
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 06:10:01] -rwx------ 1 boincer umatlas     36292 Nov 24 12:05 runpilot2-wrapper.sh
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas       100 Nov 25 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:10:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 19:02 run_atlas
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas       105 Nov 25 19:02 job.xml
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas 408610196 Nov 25 19:02 EVNT.47483658._001400.pool.root.1
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:02 start_atlas.sh
[2025-11-26 06:10:01] drwxrwx--x 2 boincer umatlas      4096 Nov 25 19:02 shared
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 19:02 input.tar.gz
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas         0 Nov 25 19:02 boinc_lockfile
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas      2782 Nov 25 19:02 pandaJob.out
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas        57 Nov 25 19:02 setup.sh.local
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas    991877 Nov 25 19:02 agis_schedconf.cvmfs.json
[2025-11-26 06:10:01] drwx------ 5 boincer umatlas      4096 Nov 25 19:02 pilot3
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas       533 Nov 26 05:56 boinc_task_state.xml
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas 907766731 Nov 26 06:07 HITS.47556149._003861.pool.root.1
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas      5911 Nov 26 06:09 init_data.xml
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas   1516240 Nov 26 06:09 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas   1906070 Nov 26 06:09 log.47556149._003861.job.log.tgz.1
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas      8400 Nov 26 06:09 heartbeat.json
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas        29 Nov 26 06:09 wrapper_checkpoint.txt
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:09 boinc_mmap_file
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas       745 Nov 26 06:10 pilotlog.txt
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas        95 Nov 26 06:10 pilot_heartbeat.json
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas   5538802 Nov 26 06:10 log.47556149._003861.job.log.1
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas       353 Nov 26 06:10 output.list
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:10 runtime_log
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas   7464960 Nov 26 06:10 result.tar.gz
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 06:10 runtime_log.err
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas       667 Nov 26 06:10 lQyMDmABph8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme8IKDmt3H3an.diag
[2025-11-26 06:10:01] -rw-r--r-- 1 boincer umatlas     21201 Nov 26 06:10 stderr.txt
[2025-11-26 06:10:01] HITS file was successfully produced:
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas 907766731 Nov 26 06:07 shared/HITS.pool.root.1
[2025-11-26 06:10:01]  *** Contents of shared directory: ***
[2025-11-26 06:10:01] total 1293424
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas 408610196 Nov 25 19:02 ATLAS.root_0
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:02 start_atlas.sh
[2025-11-26 06:10:01] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 19:02 input.tar.gz
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas 907766731 Nov 26 06:07 HITS.pool.root.1
[2025-11-26 06:10:01] -rw------- 1 boincer umatlas   7464960 Nov 26 06:10 result.tar.gz
06:10:03 (8765): run_atlas exited; CPU time 308031.578095
06:10:03 (8765): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN