Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:26 (3014846): wrapper (7.7.26015): starting
00:02:26 (3014846): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:02:26] Arguments: --nthreads 9
[2025-11-26 00:02:26] Threads: 9
[2025-11-26 00:02:26] Checking for CVMFS
[2025-11-26 00:02:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:02:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:02:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:02:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:02:29] 2.13.2.0 8790 35393 263988 153309 0 300 36409389 40960000 11655 16776704 0 34410145 99.644 30769792 39320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:02:29] CVMFS is ok
[2025-11-26 00:02:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:02:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:02:29] Further information can be found at the LHC@home message board.
[2025-11-26 00:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:02:29] Checking for apptainer binary...
[2025-11-26 00:02:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:02:29] Running /usr/bin/apptainer --version
[2025-11-26 00:02:29] apptainer version 1.4.4-1.el9
[2025-11-26 00:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:02:29] c-210-33-1.aglt2.org
[2025-11-26 00:02:29] apptainer works
[2025-11-26 00:02:29] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:02:29] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:02:30] Starting ATLAS job with PandaID=6895882675
[2025-11-26 00:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:35:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:35:53] 2025-11-27 09:35:19,684 | INFO     | extracted standard info from prmon json
[2025-11-27 04:35:53] 2025-11-27 09:35:19,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:35:53] 2025-11-27 09:35:19,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:35:53] 2025-11-27 09:35:19,709 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:35:53] 2025-11-27 09:35:19,711 | INFO     | sum of square deviations: 1472927390891.215
[2025-11-27 04:35:53] 2025-11-27 09:35:19,774 | INFO     | sum of deviations: 8290176819605.85
[2025-11-27 04:35:53] 2025-11-27 09:35:19,775 | INFO     | mean x: 1764184814.1963117
[2025-11-27 04:35:53] 2025-11-27 09:35:19,775 | INFO     | mean y: 3040009.073170732
[2025-11-27 04:35:53] 2025-11-27 09:35:19,775 | INFO     | intersect: -9926440658.199648
[2025-11-27 04:35:53] 2025-11-27 09:35:19,777 | INFO     | chi2: 10.871328415784241
[2025-11-27 04:35:53] 2025-11-27 09:35:19,779 | INFO     | sum of square deviations: 1459824252622.0234
[2025-11-27 04:35:53] 2025-11-27 09:35:19,826 | INFO     | sum of deviations: 8885314268629.021
[2025-11-27 04:35:53] 2025-11-27 09:35:19,826 | INFO     | mean x: 1764184661.702864
[2025-11-27 04:35:53] 2025-11-27 09:35:19,826 | INFO     | mean y: 3046936.285202864
[2025-11-27 04:35:53] 2025-11-27 09:35:19,826 | INFO     | intersect: -10734776551.007938
[2025-11-27 04:35:53] 2025-11-27 09:35:19,828 | INFO     | chi2: 7.734094543823706
[2025-11-27 04:35:53] 2025-11-27 09:35:19,828 | INFO     | current chi2=7.734094543823706 (change=28.857870464160936 %)
[2025-11-27 04:35:53] 2025-11-27 09:35:19,830 | INFO     | sum of square deviations: 1446799069302.691
[2025-11-27 04:35:53] 2025-11-27 09:35:19,838 | INFO     | monitor loop #6423: job 0:6895882675 is in state 'finished'
[2025-11-27 04:35:53] 2025-11-27 09:35:19,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:35:53] 2025-11-27 09:35:19,875 | INFO     | sum of deviations: 9146819826502.195
[2025-11-27 04:35:53] 2025-11-27 09:35:19,875 | INFO     | mean x: 1764184509.2094555
[2025-11-27 04:35:53] 2025-11-27 09:35:19,875 | INFO     | mean y: 3049996.5194494314
[2025-11-27 04:35:53] 2025-11-27 09:35:19,875 | INFO     | intersect: -11150314827.127026
[2025-11-27 04:35:53] 2025-11-27 09:35:19,877 | INFO     | chi2: 6.907934325188245
[2025-11-27 04:35:53] 2025-11-27 09:35:19,877 | INFO     | current chi2=6.907934325188245 (change=10.68205481526232 %)
[2025-11-27 04:35:53] 2025-11-27 09:35:19,877 | INFO     | right removable region: 1670
[2025-11-27 04:35:53] 2025-11-27 09:35:19,879 | INFO     | sum of square deviations: 1459822000502.0278
[2025-11-27 04:35:53] 2025-11-27 09:35:19,950 | INFO     | sum of deviations: 7563935107713.338
[2025-11-27 04:35:53] 2025-11-27 09:35:19,950 | INFO     | mean x: 1764184966.702864
[2025-11-27 04:35:53] 2025-11-27 09:35:19,950 | INFO     | mean y: 3048459.5608591884
[2025-11-27 04:35:53] 2025-11-27 09:35:19,951 | INFO     | intersect: -9137915713.848541
[2025-11-27 04:35:53] 2025-11-27 09:35:19,952 | INFO     | chi2: 6.559141137134095
[2025-11-27 04:35:53] 2025-11-27 09:35:19,952 | INFO     | current chi2=6.559141137134095 (change=39.66568862356525 %)
[2025-11-27 04:35:53] 2025-11-27 09:35:19,954 | INFO     | sum of square deviations: 1446794667058.1094
[2025-11-27 04:35:53] 2025-11-27 09:35:19,998 | INFO     | sum of deviations: 7127542408336.893
[2025-11-27 04:35:53] 2025-11-27 09:35:19,999 | INFO     | mean x: 1764185119.208857
[2025-11-27 04:35:53] 2025-11-27 09:35:19,999 | INFO     | mean y: 3053565.6421304606
[2025-11-27 04:35:53] 2025-11-27 09:35:19,999 | INFO     | intersect: -8688092828.259367
[2025-11-27 04:35:53] 2025-11-27 09:35:20,000 | INFO     | chi2: 5.033100592827485
[2025-11-27 04:35:53] 2025-11-27 09:35:20,001 | INFO     | current chi2=5.033100592827485 (change=23.2658592398179 %)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,001 | INFO     | left removable region: 20
[2025-11-27 04:35:53] 2025-11-27 09:35:20,002 | INFO     | sum of square deviations: 1392933654376.391
[2025-11-27 04:35:53] 2025-11-27 09:35:20,068 | INFO     | sum of deviations: 7689541879490.999
[2025-11-27 04:35:53] 2025-11-27 09:35:20,068 | INFO     | mean x: 1764185088.7175758
[2025-11-27 04:35:53] 2025-11-27 09:35:20,068 | INFO     | mean y: 3067898.869090909
[2025-11-27 04:35:53] 2025-11-27 09:35:20,068 | INFO     | intersect: -9735927982.410458
[2025-11-27 04:35:53] 2025-11-27 09:35:20,070 | INFO     | chi2: 0.8045831710052472
[2025-11-27 04:35:53] 2025-11-27 09:35:20,070 | INFO     | current memory leak: 5.52 B/s (using 1650 data points, chi2=0.80)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,071 | INFO     | could have reported an average CPU frequency of 2852 MHz (59 samples)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | ..............................
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . Timing measurements:
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . get job = 0 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . initial setup = 7 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . payload setup = 55 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . stage-in = 0 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . payload execution = 102552 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . stage-out = 4 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | . log creation = 1 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,072 | INFO     | ..............................
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | 
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | job summary report
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | --------------------------------------------------
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | PanDA job id: 6895882675
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | task id: 47556149
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | errors: (none)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:35:53] 2025-11-27 09:35:20,183 | INFO     | pilot state: finished 
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | transexitcode: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | exeerrorcode: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | exeerrordiag: 
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | exitcode: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | exitmsg: OK
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | cpuconsumptiontime: 242117 s
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | nevents: 1000
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | neventsw: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | pid: 3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | pgrp: 3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | corecount: 9
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | event service: False
[2025-11-27 04:35:53] 2025-11-27 09:35:20,184 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284365, 3: 2284393, 14: 2284393, 25: 2284421, 32: 2284839, 35: 2284867, 102612: 2358047, 102617: 2367041, 102619: 2367097, 1026
[2025-11-27 04:35:53] 2025-11-27 09:35:20,185 | INFO     | --------------------------------------------------
[2025-11-27 04:35:53] 2025-11-27 09:35:20,185 | INFO     | 
[2025-11-27 04:35:53] 2025-11-27 09:35:20,185 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 04:35:53] 2025-11-27 09:35:20,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | job 6895882675 has completed (purged errors)
[2025-11-27 04:35:53] 2025-11-27 09:35:20,219 | INFO     | overall cleanup function is called
[2025-11-27 04:35:53] 2025-11-27 09:35:20,794 | INFO     | PID=3020432 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:35:53] 2025-11-27 09:35:20,795 | INFO     | .. there are 12 such processes running
[2025-11-27 04:35:53] 2025-11-27 09:35:21,272 | INFO     | --- collectZombieJob: --- 10, [3044022]
[2025-11-27 04:35:53] 2025-11-27 09:35:21,272 | INFO     | zombie collector waiting for pid 3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:21,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:35:53] 2025-11-27 09:35:21,273 | INFO     | collected zombie processes
[2025-11-27 04:35:53] 2025-11-27 09:35:21,273 | INFO     | will attempt to kill all subprocesses of pid=3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:21,541 | INFO     | process IDs to be killed: [3044022] (in reverse order)
[2025-11-27 04:35:53] 2025-11-27 09:35:21,622 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:35:53] 2025-11-27 09:35:21,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:35:53] 2025-11-27 09:35:21,631 | INFO     | did not find any defunct processes belonging to 3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:21,641 | INFO     | did not find any defunct processes belonging to 3044022
[2025-11-27 04:35:53] 2025-11-27 09:35:21,642 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:35:53] 2025-11-27 09:35:21,642 | INFO     | ready for new job
[2025-11-27 04:35:53] 2025-11-27 09:35:21,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:35:53] 2025-11-27 09:35:21,650 | INFO     | ***************************************
[2025-11-27 04:35:53] 2025-11-27 09:35:21,650 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:35:53] 2025-11-27 09:35:21,650 | INFO     | ***************************************
[2025-11-27 04:35:53] 2025-11-27 09:35:21,650 | INFO     | 
[2025-11-27 04:35:53] 2025-11-27 09:35:21,653 | INFO     | architecture information:
[2025-11-27 04:35:53] 2025-11-27 09:35:21,654 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:35:53] 2025-11-27 09:35:21,670 | INFO     | cat /etc/os-release:
[2025-11-27 04:35:53] NAME="CentOS Linux"
[2025-11-27 04:35:53] VERSION="7 (Core)"
[2025-11-27 04:35:53] ID="centos"
[2025-11-27 04:35:53] ID_LIKE="rhel fedora"
[2025-11-27 04:35:53] VERSION_ID="7"
[2025-11-27 04:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:35:53] ANSI_COLOR="0;31"
[2025-11-27 04:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:35:53] HOME_URL="https://www.centos.org/"
[2025-11-27 04:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:35:53] 
[2025-11-27 04:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:35:53] 
[2025-11-27 04:35:53] 2025-11-27 09:35:21,670 | INFO     | ***************************************
[2025-11-27 04:35:53] 2025-11-27 09:35:22,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 04:35:53] 2025-11-27 09:35:22,238 | INFO     | sufficient remaining disk space (68799168512 B)
[2025-11-27 04:35:53] 2025-11-27 09:35:22,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:35:53] 2025-11-27 09:35:22,239 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:35:53] 2025-11-27 09:35:22,239 | INFO     | update_server=False
[2025-11-27 04:35:53] 2025-11-27 09:35:22,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:35:53] 2025-11-27 09:35:22,342 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 04:35:53] 2025-11-27 09:35:22,343 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 04:35:53] 2025-11-27 09:35:22,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:35:53] 2025-11-27 09:35:22,343 | INFO     | will abort loop
[2025-11-27 04:35:53] 2025-11-27 09:35:22,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:35:53] 2025-11-27 09:35:22,604 | INFO     | all data control threads have been joined
[2025-11-27 04:35:53] 2025-11-27 09:35:22,698 | INFO     | all payload control threads have been joined
[2025-11-27 04:35:53] 2025-11-27 09:35:23,161 | INFO     | all job control threads have been joined
[2025-11-27 04:35:53] 2025-11-27 09:35:23,245 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,348 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,610 | INFO     | [data] control thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,648 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,660 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,705 | INFO     | [payload] control thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,831 | INFO     | [job] validate thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,832 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,968 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:23,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:35:53] 2025-11-27 09:35:23,994 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:24,166 | INFO     | [job] control thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:24,230 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:24,540 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:24,562 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:25,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:35:53] 2025-11-27 09:35:26,201 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:28,002 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:35:53] 2025-11-27 09:35:43,851 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:35:53] 2025-11-27 09:35:44,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696982181696)>', '<ExcThread(monitor, started 139696353044224)>']
[2025-11-27 04:35:53] 2025-11-27 09:35:49,127 | INFO     | all workflow threads have been joined
[2025-11-27 04:35:53] 2025-11-27 09:35:49,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:35:53] 2025-11-27 09:35:49,128 | INFO     | traces error code: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:49,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | INFO     | PID=3020432 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | INFO     | .. there are 12 such processes running
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:35:53] 2025-11-27 09:35:53,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:35:53] 2025-11-27 09:35:53,228 | INFO     | [monitor] control thread has ended
[2025-11-27 04:35:53] 2025-11-27 09:35:53,437 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:35:53] 2025-11-27 09:35:53,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:35:53] 2025-11-27 09:35:53,456 [wrapper] pilotpid: 3020432
[2025-11-27 04:35:53] 2025-11-27 09:35:53,458 [wrapper] Pilot exit status: 0
[2025-11-27 04:35:53] 2025-11-27 09:35:53,472 [wrapper] pandaids: 6895882675
[2025-11-27 04:35:53] 2025-11-27 09:35:53,557 [wrapper] cleanup supervisor_pilot 1453944 3020434
[2025-11-27 04:35:53] 2025-11-27 09:35:53,562 [wrapper] Test setup, not cleaning
[2025-11-27 04:35:53] 2025-11-27 09:35:53,565 [wrapper] apfmon messages muted
[2025-11-27 04:35:53] 2025-11-27 09:35:53,575 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:35:53] 2025-11-27 09:35:53,591 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:35:53]  *** Error codes and diagnostics ***
[2025-11-27 04:35:53]     "exeErrorCode": 0,
[2025-11-27 04:35:53]     "exeErrorDiag": "",
[2025-11-27 04:35:53]     "pilotErrorCode": 0,
[2025-11-27 04:35:53]     "pilotErrorDiag": "",
[2025-11-27 04:35:53]  *** Listing of results directory ***
[2025-11-27 04:35:53] total 1325944
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:37 queuedata.json
[2025-11-27 04:35:53] -rwx------. 1 boincer umatlas     36292 Nov 24 11:38 runpilot2-wrapper.sh
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:35:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:02 run_atlas
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:02 job.xml
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas 408286891 Nov 26 00:02 EVNT.47483658._001386.pool.root.1
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-27 04:35:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:02 shared
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:02 input.tar.gz
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:02 boinc_lockfile
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 00:02 pandaJob.out
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas        57 Nov 26 00:02 setup.sh.local
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas    991877 Nov 26 00:03 agis_schedconf.cvmfs.json
[2025-11-27 04:35:53] drwx------. 5 boincer umatlas      4096 Nov 26 00:03 pilot3
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:16 boinc_task_state.xml
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 04:30 init_data.xml
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas 913566543 Nov 27 04:34 HITS.47556149._003721.pool.root.1
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas      1064 Nov 27 04:34 memory_monitor_summary.json
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas   2769518 Nov 27 04:35 log.47556149._003721.job.log.tgz.1
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas        95 Nov 27 04:35 pilot_heartbeat.json
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas      8625 Nov 27 04:35 heartbeat.json
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:35 boinc_mmap_file
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:35 wrapper_checkpoint.txt
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas       823 Nov 27 04:35 pilotlog.txt
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas  13228566 Nov 27 04:35 log.47556149._003721.job.log.1
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas       353 Nov 27 04:35 output.list
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:35 runtime_log
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas  16015360 Nov 27 04:35 result.tar.gz
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas      9354 Nov 27 04:35 runtime_log.err
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas       664 Nov 27 04:35 4EgKDmaloh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmplLKDmMkVCgm.diag
[2025-11-27 04:35:53] -rw-r--r--. 1 boincer umatlas     21413 Nov 27 04:35 stderr.txt
[2025-11-27 04:35:53] HITS file was successfully produced:
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas 913566543 Nov 27 04:34 shared/HITS.pool.root.1
[2025-11-27 04:35:53]  *** Contents of shared directory: ***
[2025-11-27 04:35:53] total 1307120
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas 408286891 Nov 26 00:02 ATLAS.root_0
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:02 start_atlas.sh
[2025-11-27 04:35:53] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:02 input.tar.gz
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas 913566543 Nov 27 04:34 HITS.pool.root.1
[2025-11-27 04:35:53] -rw-------. 1 boincer umatlas  16015360 Nov 27 04:35 result.tar.gz
04:35:55 (3014846): run_atlas exited; CPU time 242921.062065
04:35:55 (3014846): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN