Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:19:51 (1231351): wrapper (7.7.26015): starting
19:19:51 (1231351): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:19:51] Arguments: --nthreads 8
[2025-11-25 19:19:51] Threads: 8
[2025-11-25 19:19:51] Checking for CVMFS
[2025-11-25 19:19:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:19:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:19:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:19:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:19:52] 2.13.3.0 14337 29270 361440 153303 1 107 28614764 40960000 26258 16776704 0 157327542 99.674 129525500 38085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:19:52] CVMFS is ok
[2025-11-25 19:19:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:19:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:19:52] Further information can be found at the LHC@home message board.
[2025-11-25 19:19:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:19:52] Checking for apptainer binary...
[2025-11-25 19:19:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:19:52] Running /usr/bin/apptainer --version
[2025-11-25 19:19:52] apptainer version 1.4.4-1.el9
[2025-11-25 19:19:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:19:53] c7-10-12.aglt2.org
[2025-11-25 19:19:53] apptainer works
[2025-11-25 19:19:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:19:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:19:53] Starting ATLAS job with PandaID=6896451255
[2025-11-25 19:19:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:35:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:35:34] 2025-11-26 11:34:43,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,126 | INFO     | time since job start (40466s) is within the limit (172800.0s)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,785 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 06:35:34] 2025-11-26 11:34:44,792 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3278.420875000001
[2025-11-26 06:35:34] 2025-11-26 11:34:44,803 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896451255/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,804 | INFO     | extracted standard info from prmon json
[2025-11-26 06:35:34] 2025-11-26 11:34:44,805 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:35:34] 2025-11-26 11:34:44,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:35:34] 2025-11-26 11:34:44,822 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:35:34] 2025-11-26 11:34:44,824 | INFO     | sum of square deviations: 90365700804.03917
[2025-11-26 06:35:34] 2025-11-26 11:34:44,839 | INFO     | sum of deviations: 478548262839.25366
[2025-11-26 06:35:34] 2025-11-26 11:34:44,839 | INFO     | mean x: 1764136670.3921568
[2025-11-26 06:35:34] 2025-11-26 11:34:44,839 | INFO     | mean y: 2873990.5490196077
[2025-11-26 06:35:34] 2025-11-26 11:34:44,839 | INFO     | intersect: -9339437655.524736
[2025-11-26 06:35:34] 2025-11-26 11:34:44,840 | INFO     | chi2: 6.17935363419652
[2025-11-26 06:35:34] 2025-11-26 11:34:44,840 | INFO     | sum of square deviations: 88336818681.77495
[2025-11-26 06:35:34] 2025-11-26 11:34:44,849 | INFO     | sum of deviations: 717117200692.1521
[2025-11-26 06:35:34] 2025-11-26 11:34:44,849 | INFO     | mean x: 1764136517.9027355
[2025-11-26 06:35:34] 2025-11-26 11:34:44,849 | INFO     | mean y: 2891923.47112462
[2025-11-26 06:35:34] 2025-11-26 11:34:44,849 | INFO     | intersect: -14318346493.712397
[2025-11-26 06:35:34] 2025-11-26 11:34:44,850 | INFO     | chi2: 2.615473412381757
[2025-11-26 06:35:34] 2025-11-26 11:34:44,850 | INFO     | current chi2=2.615473412381757 (change=57.673996873916764 %)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,850 | INFO     | sum of square deviations: 86338501892.18666
[2025-11-26 06:35:34] 2025-11-26 11:34:44,859 | INFO     | sum of deviations: 780807428323.5413
[2025-11-26 06:35:34] 2025-11-26 11:34:44,859 | INFO     | mean x: 1764136365.4119449
[2025-11-26 06:35:34] 2025-11-26 11:34:44,859 | INFO     | mean y: 2896769.3920367532
[2025-11-26 06:35:34] 2025-11-26 11:34:44,859 | INFO     | intersect: -15951176425.083838
[2025-11-26 06:35:34] 2025-11-26 11:34:44,860 | INFO     | chi2: 2.17121275658118
[2025-11-26 06:35:34] 2025-11-26 11:34:44,860 | INFO     | current chi2=2.17121275658118 (change=16.98586013902603 %)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,860 | INFO     | right removable region: 652
[2025-11-26 06:35:34] 2025-11-26 11:34:44,860 | INFO     | sum of square deviations: 88336255651.77493
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | sum of deviations: 317945736972.1912
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | mean x: 1764136822.9027355
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | mean y: 2886028.3936170214
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | intersect: -6346712764.752876
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | chi2: 4.119744880871019
[2025-11-26 06:35:34] 2025-11-26 11:34:44,868 | INFO     | current chi2=4.119744880871019 (change=33.33048851465037 %)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,869 | INFO     | sum of square deviations: 86337535777.82788
[2025-11-26 06:35:34] 2025-11-26 11:34:44,877 | INFO     | sum of deviations: 286084366239.33716
[2025-11-26 06:35:34] 2025-11-26 11:34:44,877 | INFO     | mean x: 1764136975.4088821
[2025-11-26 06:35:34] 2025-11-26 11:34:44,877 | INFO     | mean y: 2888456.803981623
[2025-11-26 06:35:34] 2025-11-26 11:34:44,877 | INFO     | intersect: -5842680379.767328
[2025-11-26 06:35:34] 2025-11-26 11:34:44,877 | INFO     | chi2: 4.0866026222234355
[2025-11-26 06:35:34] 2025-11-26 11:34:44,878 | INFO     | current chi2=4.0866026222234355 (change=0.8044735682898893 %)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,878 | INFO     | left removable region: 20
[2025-11-26 06:35:34] 2025-11-26 11:34:44,878 | INFO     | sum of square deviations: 78272921445.46848
[2025-11-26 06:35:34] 2025-11-26 11:34:44,885 | INFO     | sum of deviations: 552451102660.3926
[2025-11-26 06:35:34] 2025-11-26 11:34:44,885 | INFO     | mean x: 1764136944.936709
[2025-11-26 06:35:34] 2025-11-26 11:34:44,886 | INFO     | mean y: 2914229.5348101268
[2025-11-26 06:35:34] 2025-11-26 11:34:44,886 | INFO     | intersect: -12448382879.047106
[2025-11-26 06:35:34] 2025-11-26 11:34:44,886 | INFO     | chi2: 0.03862928974644633
[2025-11-26 06:35:34] 2025-11-26 11:34:44,886 | INFO     | current memory leak: 7.06 B/s (using 632 data points, chi2=0.04)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | could have reported an average CPU frequency of 3246 MHz (26 samples)
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | ..............................
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . Timing measurements:
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . get job = 0 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . initial setup = 3 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . payload setup = 14 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . stage-in = 0 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . payload execution = 40400 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . stage-out = 3 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | . log creation = 0 s
[2025-11-26 06:35:34] 2025-11-26 11:34:44,887 | INFO     | ..............................
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | 
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | job summary report
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | --------------------------------------------------
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | PanDA job id: 6896451255
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | task id: 47556149
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | errors: (none)
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | pilot state: finished 
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | transexitcode: 0
[2025-11-26 06:35:34] 2025-11-26 11:34:45,295 | INFO     | exeerrorcode: 0
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | exeerrordiag: 
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | exitcode: 0
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | exitmsg: OK
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | cpuconsumptiontime: 200081 s
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | nevents: 1000
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | neventsw: 0
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | pid: 1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | pgrp: 1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | corecount: 8
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | event service: False
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | sizes: {0: 2283480, 1: 2284336, 12: 2284626, 22: 2284626, 40418: 2328811, 40419: 2328810, 40423: 2338044, 40432: 2338234}
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | --------------------------------------------------
[2025-11-26 06:35:34] 2025-11-26 11:34:45,296 | INFO     | 
[2025-11-26 06:35:34] 2025-11-26 11:34:45,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:35:34] 2025-11-26 11:34:45,346 | INFO     | job 6896451255 has completed (purged errors)
[2025-11-26 06:35:34] 2025-11-26 11:34:45,346 | INFO     | overall cleanup function is called
[2025-11-26 06:35:34] 2025-11-26 11:34:46,368 | INFO     | --- collectZombieJob: --- 10, [1244777]
[2025-11-26 06:35:34] 2025-11-26 11:34:46,368 | INFO     | zombie collector waiting for pid 1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:46,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:35:34] 2025-11-26 11:34:46,369 | INFO     | collected zombie processes
[2025-11-26 06:35:34] 2025-11-26 11:34:46,369 | INFO     | will attempt to kill all subprocesses of pid=1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:46,856 | INFO     | process IDs to be killed: [1244777] (in reverse order)
[2025-11-26 06:35:34] 2025-11-26 11:34:47,028 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:35:34] 2025-11-26 11:34:47,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:35:34] 2025-11-26 11:34:47,050 | INFO     | did not find any defunct processes belonging to 1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:47,069 | INFO     | did not find any defunct processes belonging to 1244777
[2025-11-26 06:35:34] 2025-11-26 11:34:47,070 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:35:34] 2025-11-26 11:34:47,070 | INFO     | ready for new job
[2025-11-26 06:35:34] 2025-11-26 11:34:47,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:35:34] 2025-11-26 11:34:47,074 | INFO     | ***************************************
[2025-11-26 06:35:34] 2025-11-26 11:34:47,074 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:35:34] 2025-11-26 11:34:47,075 | INFO     | ***************************************
[2025-11-26 06:35:34] 2025-11-26 11:34:47,075 | INFO     | 
[2025-11-26 06:35:34] 2025-11-26 11:34:47,078 | INFO     | architecture information:
[2025-11-26 06:35:34] 2025-11-26 11:34:47,079 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:35:34] 2025-11-26 11:34:47,095 | INFO     | cat /etc/os-release:
[2025-11-26 06:35:34] NAME="CentOS Linux"
[2025-11-26 06:35:34] VERSION="7 (Core)"
[2025-11-26 06:35:34] ID="centos"
[2025-11-26 06:35:34] ID_LIKE="rhel fedora"
[2025-11-26 06:35:34] VERSION_ID="7"
[2025-11-26 06:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:35:34] ANSI_COLOR="0;31"
[2025-11-26 06:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:35:34] HOME_URL="https://www.centos.org/"
[2025-11-26 06:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:35:34] 
[2025-11-26 06:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:35:34] 
[2025-11-26 06:35:34] 2025-11-26 11:34:47,095 | INFO     | ***************************************
[2025-11-26 06:35:34] 2025-11-26 11:34:47,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 06:35:34] 2025-11-26 11:34:47,632 | INFO     | sufficient remaining disk space (76864815104 B)
[2025-11-26 06:35:34] 2025-11-26 11:34:47,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:35:34] 2025-11-26 11:34:47,633 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:35:34] 2025-11-26 11:34:47,633 | INFO     | update_server=False
[2025-11-26 06:35:34] 2025-11-26 11:34:47,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:35:34] 2025-11-26 11:34:47,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:35:34] 2025-11-26 11:34:47,636 | INFO     | aborting loop
[2025-11-26 06:35:34] 2025-11-26 11:34:48,503 | INFO     | all data control threads have been joined
[2025-11-26 06:35:34] 2025-11-26 11:34:48,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:35:34] 2025-11-26 11:34:48,639 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,640 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,684 | INFO     | all job control threads have been joined
[2025-11-26 06:35:34] 2025-11-26 11:34:48,692 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,772 | INFO     | [job] validate thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,845 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,873 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:48,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:49,023 | INFO     | all payload control threads have been joined
[2025-11-26 06:35:34] 2025-11-26 11:34:49,064 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:49,074 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:49,507 | INFO     | [data] control thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:49,689 | INFO     | [job] control thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:49,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:35:34] 2025-11-26 11:34:50,028 | INFO     | [payload] control thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:50,189 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:50,641 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:50,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:35:34] 2025-11-26 11:34:50,977 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:34:54,700 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:35:34] 2025-11-26 11:35:17,804 | INFO     | PID=1236366 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:35:34] 2025-11-26 11:35:17,804 | INFO     | .. there are 41 such processes running
[2025-11-26 06:35:34] 2025-11-26 11:35:17,804 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:35:34] 2025-11-26 11:35:17,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:35:34] 2025-11-26 11:35:17,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:35:34] 2025-11-26 11:35:19,348 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-26 06:35:34] 2025-11-26 11:35:28,277 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:35:34] 2025-11-26 11:35:29,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568808290112)>', '<ExcThread(monitor, started 140568072009472)>']
[2025-11-26 06:35:34] 2025-11-26 11:35:29,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:35:34] 2025-11-26 11:35:29,874 | INFO     | [monitor] control thread has ended
[2025-11-26 06:35:34] 2025-11-26 11:35:34,215 | INFO     | all workflow threads have been joined
[2025-11-26 06:35:34] 2025-11-26 11:35:34,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:35:34] 2025-11-26 11:35:34,216 | INFO     | traces error code: 0
[2025-11-26 06:35:34] 2025-11-26 11:35:34,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:35:34] 2025-11-26 11:35:34,355 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:35:34] 2025-11-26 11:35:34,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:35:34] 2025-11-26 11:35:34,383 [wrapper] pilotpid: 1236366
[2025-11-26 06:35:34] 2025-11-26 11:35:34,397 [wrapper] Pilot exit status: 0
[2025-11-26 06:35:34] 2025-11-26 11:35:34,500 [wrapper] pandaids: 6896451255
[2025-11-26 06:35:34] 2025-11-26 11:35:34,642 [wrapper] cleanup supervisor_pilot 3997044 1236367
[2025-11-26 06:35:34] 2025-11-26 11:35:34,646 [wrapper] Test setup, not cleaning
[2025-11-26 06:35:34] 2025-11-26 11:35:34,649 [wrapper] apfmon messages muted
[2025-11-26 06:35:34] 2025-11-26 11:35:34,654 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:35:34] 2025-11-26 11:35:34,658 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:35:34]  *** Error codes and diagnostics ***
[2025-11-26 06:35:34]     "exeErrorCode": 0,
[2025-11-26 06:35:34]     "exeErrorDiag": "",
[2025-11-26 06:35:34]     "pilotErrorCode": 0,
[2025-11-26 06:35:34]     "pilotErrorDiag": "",
[2025-11-26 06:35:34]  *** Listing of results directory ***
[2025-11-26 06:35:34] total 1311628
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:26 queuedata.json
[2025-11-26 06:35:34] -rwx------. 1 boincer umatlas     36292 Nov 24 23:28 runpilot2-wrapper.sh
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:35:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:19 run_atlas
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:19 job.xml
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas 409326318 Nov 25 19:19 EVNT.47483658._001510.pool.root.1
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:19 start_atlas.sh
[2025-11-26 06:35:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:19 shared
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas    590111 Nov 25 19:19 input.tar.gz
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:19 boinc_lockfile
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas      2782 Nov 25 19:19 pandaJob.out
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas        57 Nov 25 19:19 setup.sh.local
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas    991877 Nov 25 19:20 agis_schedconf.cvmfs.json
[2025-11-26 06:35:34] drwx------. 5 boincer umatlas      4096 Nov 25 19:20 pilot3
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas       533 Nov 26 06:25 boinc_task_state.xml
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas      6905 Nov 26 06:31 init_data.xml
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas 915372708 Nov 26 06:34 HITS.47556149._004961.pool.root.1
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas        95 Nov 26 06:34 pilot_heartbeat.json
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas      1048 Nov 26 06:34 memory_monitor_summary.json
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas   1516240 Nov 26 06:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas   1896403 Nov 26 06:34 log.47556149._004961.job.log.tgz.1
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas      8572 Nov 26 06:34 heartbeat.json
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 06:35 boinc_mmap_file
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas        29 Nov 26 06:35 wrapper_checkpoint.txt
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas      4824 Nov 26 06:35 pilotlog.txt
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas   5346048 Nov 26 06:35 log.47556149._004961.job.log.1
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas       353 Nov 26 06:35 output.list
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas       620 Nov 26 06:35 runtime_log
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas   7260160 Nov 26 06:35 result.tar.gz
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 06:35 runtime_log.err
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas       660 Nov 26 06:35 dqBMDmeqzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH7LKDmKjab3n.diag
[2025-11-26 06:35:34] -rw-r--r--. 1 boincer umatlas     21320 Nov 26 06:35 stderr.txt
[2025-11-26 06:35:34] HITS file was successfully produced:
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas 915372708 Nov 26 06:34 shared/HITS.pool.root.1
[2025-11-26 06:35:34]  *** Contents of shared directory: ***
[2025-11-26 06:35:34] total 1301352
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas 409326318 Nov 25 19:19 ATLAS.root_0
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:19 start_atlas.sh
[2025-11-26 06:35:34] -rw-r--r--. 2 boincer umatlas    590111 Nov 25 19:19 input.tar.gz
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas 915372708 Nov 26 06:34 HITS.pool.root.1
[2025-11-26 06:35:34] -rw-------. 1 boincer umatlas   7260160 Nov 26 06:35 result.tar.gz
06:35:36 (1231351): run_atlas exited; CPU time 200199.205519
06:35:36 (1231351): called boinc_finish(0)

</stderr_txt>
]]>

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