Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:17 (1216189): wrapper (7.7.26015): starting
18:21:17 (1216189): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 18:21:17] Arguments: --nthreads 10
[2025-11-25 18:21:17] Threads: 10
[2025-11-25 18:21:17] Checking for CVMFS
[2025-11-25 18:21:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:21:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:21:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:21:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:21:18] 2.13.2.0 241302 28065 220180 153302 0 363 32308934 40960001 25419 16776704 0 124983807 99.727 109180994 37971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 18:21:18] CVMFS is ok
[2025-11-25 18:21:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:21:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:21:18] Further information can be found at the LHC@home message board.
[2025-11-25 18:21:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:21:18] Checking for apptainer binary...
[2025-11-25 18:21:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:21:18] Running /usr/bin/apptainer --version
[2025-11-25 18:21:18] apptainer version 1.4.4-1.el9
[2025-11-25 18:21:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:21:18] c-212-3.aglt2.org
[2025-11-25 18:21:18] apptainer works
[2025-11-25 18:21:18] Set ATHENA_PROC_NUMBER=10
[2025-11-25 18:21:18] Set ATHENA_CORE_NUMBER=10
[2025-11-25 18:21:18] Starting ATLAS job with PandaID=6895331073
[2025-11-25 18:21:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:45:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:45:22] 2025-11-26 15:44:17,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:45:22] 2025-11-26 15:44:17,936 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895331073/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:45:22] 2025-11-26 15:44:17,937 | INFO     | extracted standard info from prmon json
[2025-11-26 10:45:22] 2025-11-26 15:44:17,937 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:45:22] 2025-11-26 15:44:17,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:45:22] 2025-11-26 15:44:18,069 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:45:22] 2025-11-26 15:44:18,070 | INFO     | sum of square deviations: 279567292555.7615
[2025-11-26 10:45:22] 2025-11-26 15:44:18,253 | INFO     | sum of deviations: 2042719570439.3032
[2025-11-26 10:45:22] 2025-11-26 15:44:18,254 | INFO     | mean x: 1764142355.7608695
[2025-11-26 10:45:22] 2025-11-26 15:44:18,254 | INFO     | mean y: 3219942.1138716354
[2025-11-26 10:45:22] 2025-11-26 15:44:18,254 | INFO     | intersect: -12886872036.134453
[2025-11-26 10:45:22] 2025-11-26 15:44:18,319 | INFO     | chi2: 6.334571410534237
[2025-11-26 10:45:22] 2025-11-26 15:44:18,320 | INFO     | sum of square deviations: 275250045132.57086
[2025-11-26 10:45:22] 2025-11-26 15:44:18,676 | INFO     | sum of deviations: 2391212287712.2773
[2025-11-26 10:45:22] 2025-11-26 15:44:18,858 | INFO     | mean x: 1764142203.2726326
[2025-11-26 10:45:22] 2025-11-26 15:44:18,858 | INFO     | mean y: 3232244.056191467
[2025-11-26 10:45:22] 2025-11-26 15:44:18,858 | INFO     | intersect: -15322609071.267004
[2025-11-26 10:45:22] 2025-11-26 15:44:18,859 | INFO     | chi2: 3.2573238244745717
[2025-11-26 10:45:22] 2025-11-26 15:44:18,859 | INFO     | current chi2=3.2573238244745717 (change=48.5786233452555 %)
[2025-11-26 10:45:22] 2025-11-26 15:44:18,860 | INFO     | sum of square deviations: 270977437482.17877
[2025-11-26 10:45:22] 2025-11-26 15:44:19,084 | INFO     | sum of deviations: 2515048866617.1323
[2025-11-26 10:45:22] 2025-11-26 15:44:19,085 | INFO     | mean x: 1764142050.7834728
[2025-11-26 10:45:22] 2025-11-26 15:44:19,085 | INFO     | mean y: 3236660.261506276
[2025-11-26 10:45:22] 2025-11-26 15:44:19,085 | INFO     | intersect: -16370464067.742447
[2025-11-26 10:45:22] 2025-11-26 15:44:19,086 | INFO     | chi2: 2.7369663469109953
[2025-11-26 10:45:22] 2025-11-26 15:44:19,086 | INFO     | current chi2=2.7369663469109953 (change=15.974999895735376 %)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,086 | INFO     | right removable region: 955
[2025-11-26 10:45:22] 2025-11-26 15:44:19,087 | INFO     | sum of square deviations: 275248712892.5706
[2025-11-26 10:45:22] 2025-11-26 15:44:19,291 | INFO     | sum of deviations: 1724337714454.2283
[2025-11-26 10:45:22] 2025-11-26 15:44:19,291 | INFO     | mean x: 1764142508.2726326
[2025-11-26 10:45:22] 2025-11-26 15:44:19,291 | INFO     | mean y: 3231173.4953173776
[2025-11-26 10:45:22] 2025-11-26 15:44:19,291 | INFO     | intersect: -11048509736.456413
[2025-11-26 10:45:22] 2025-11-26 15:44:19,292 | INFO     | chi2: 3.8593247736115144
[2025-11-26 10:45:22] 2025-11-26 15:44:19,292 | INFO     | current chi2=3.8593247736115144 (change=39.07520298542137 %)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,342 | INFO     | sum of square deviations: 270975065995.87048
[2025-11-26 10:45:22] 2025-11-26 15:44:19,450 | INFO     | PID=1219864 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,451 | INFO     | .. there are 35 such processes running
[2025-11-26 10:45:22] 2025-11-26 15:44:19,534 | INFO     | sum of deviations: 1650561877489.7205
[2025-11-26 10:45:22] 2025-11-26 15:44:19,535 | INFO     | mean x: 1764142660.7803347
[2025-11-26 10:45:22] 2025-11-26 15:44:19,535 | INFO     | mean y: 3233804.9320083684
[2025-11-26 10:45:22] 2025-11-26 15:44:19,535 | INFO     | intersect: -10742502566.183683
[2025-11-26 10:45:22] 2025-11-26 15:44:19,536 | INFO     | chi2: 3.8072015246589634
[2025-11-26 10:45:22] 2025-11-26 15:44:19,536 | INFO     | current chi2=3.8072015246589634 (change=1.3505794927897339 %)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,536 | INFO     | left removable region: 20
[2025-11-26 10:45:22] 2025-11-26 15:44:19,573 | INFO     | sum of square deviations: 253510958745.38315
[2025-11-26 10:45:22] 2025-11-26 15:44:19,608 | INFO     | sum of deviations: 2022621184460.3047
[2025-11-26 10:45:22] 2025-11-26 15:44:19,608 | INFO     | mean x: 1764142630.319786
[2025-11-26 10:45:22] 2025-11-26 15:44:19,609 | INFO     | mean y: 3255228.9187165773
[2025-11-26 10:45:22] 2025-11-26 15:44:19,609 | INFO     | intersect: -14071845406.387867
[2025-11-26 10:45:22] 2025-11-26 15:44:19,610 | INFO     | chi2: 0.13612525568055886
[2025-11-26 10:45:22] 2025-11-26 15:44:19,610 | INFO     | current memory leak: 7.98 B/s (using 935 data points, chi2=0.14)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,610 | INFO     | could have reported an average CPU frequency of 3200 MHz (36 samples)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | ..............................
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . Timing measurements:
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . get job = 0 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . initial setup = 2 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . payload setup = 8 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . stage-in = 0 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . payload execution = 58911 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . stage-out = 12 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,611 | INFO     | . log creation = 3 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,612 | INFO     | ..............................
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | job summary report
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | --------------------------------------------------
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | PanDA job id: 6895331073
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | task id: 47556137
[2025-11-26 10:45:22] 2025-11-26 15:44:19,685 | INFO     | errors: (none)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | pilot state: finished 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | transexitcode: 0
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | exeerrorcode: 0
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | exeerrordiag: 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | exitcode: 0
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | exitmsg: OK
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | cpuconsumptiontime: 186470 s
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | nevents: 1000
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | neventsw: 0
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | pid: 1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | pgrp: 1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | corecount: 10
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | event service: False
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 11: 2284582, 58923: 2336432, 58924: 2336431, 58938: 2345609, 58941: 2345665, 58952: 2345911}
[2025-11-26 10:45:22] 2025-11-26 15:44:19,686 | INFO     | --------------------------------------------------
[2025-11-26 10:45:22] 2025-11-26 15:44:19,687 | INFO     | 
[2025-11-26 10:45:22] 2025-11-26 15:44:19,687 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 10:45:22] 2025-11-26 15:44:19,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:45:22] 2025-11-26 15:44:19,730 | INFO     | job 6895331073 has completed (purged errors)
[2025-11-26 10:45:22] 2025-11-26 15:44:19,731 | INFO     | overall cleanup function is called
[2025-11-26 10:45:22] 2025-11-26 15:44:20,792 | INFO     | --- collectZombieJob: --- 10, [1226327]
[2025-11-26 10:45:22] 2025-11-26 15:44:20,793 | INFO     | zombie collector waiting for pid 1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:20,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:45:22] 2025-11-26 15:44:20,793 | INFO     | collected zombie processes
[2025-11-26 10:45:22] 2025-11-26 15:44:20,793 | INFO     | will attempt to kill all subprocesses of pid=1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:22,030 | INFO     | process IDs to be killed: [1226327] (in reverse order)
[2025-11-26 10:45:22] 2025-11-26 15:44:22,238 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:45:22] 2025-11-26 15:44:22,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:45:22] 2025-11-26 15:44:22,265 | INFO     | did not find any defunct processes belonging to 1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:22,283 | INFO     | did not find any defunct processes belonging to 1226327
[2025-11-26 10:45:22] 2025-11-26 15:44:22,285 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:45:22] 2025-11-26 15:44:22,285 | INFO     | ready for new job
[2025-11-26 10:45:22] 2025-11-26 15:44:22,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:45:22] 2025-11-26 15:44:22,289 | INFO     | ***************************************
[2025-11-26 10:45:22] 2025-11-26 15:44:22,290 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:45:22] 2025-11-26 15:44:22,290 | INFO     | ***************************************
[2025-11-26 10:45:22] 2025-11-26 15:44:22,290 | INFO     | 
[2025-11-26 10:45:22] 2025-11-26 15:44:22,295 | INFO     | architecture information:
[2025-11-26 10:45:22] 2025-11-26 15:44:22,296 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:45:22] 2025-11-26 15:44:22,324 | INFO     | cat /etc/os-release:
[2025-11-26 10:45:22] NAME="CentOS Linux"
[2025-11-26 10:45:22] VERSION="7 (Core)"
[2025-11-26 10:45:22] ID="centos"
[2025-11-26 10:45:22] ID_LIKE="rhel fedora"
[2025-11-26 10:45:22] VERSION_ID="7"
[2025-11-26 10:45:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:45:22] ANSI_COLOR="0;31"
[2025-11-26 10:45:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:45:22] HOME_URL="https://www.centos.org/"
[2025-11-26 10:45:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:45:22] 
[2025-11-26 10:45:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:45:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:45:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:45:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:45:22] 
[2025-11-26 10:45:22] 2025-11-26 15:44:22,324 | INFO     | ***************************************
[2025-11-26 10:45:22] 2025-11-26 15:44:22,831 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 10:45:22] 2025-11-26 15:44:22,968 | INFO     | sufficient remaining disk space (117356625920 B)
[2025-11-26 10:45:22] 2025-11-26 15:44:22,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:45:22] 2025-11-26 15:44:22,968 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:45:22] 2025-11-26 15:44:22,968 | INFO     | update_server=False
[2025-11-26 10:45:22] 2025-11-26 15:44:22,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:45:22] 2025-11-26 15:44:22,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:45:22] 2025-11-26 15:44:23,003 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 10:45:22] 2025-11-26 15:44:23,003 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 10:45:22] 2025-11-26 15:44:23,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:45:22] 2025-11-26 15:44:23,003 | INFO     | will abort loop
[2025-11-26 10:45:22] 2025-11-26 15:44:23,306 | INFO     | all data control threads have been joined
[2025-11-26 10:45:22] 2025-11-26 15:44:23,935 | INFO     | all payload control threads have been joined
[2025-11-26 10:45:22] 2025-11-26 15:44:23,976 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,029 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:45:22] 2025-11-26 15:44:24,213 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,312 | INFO     | [data] control thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,436 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,442 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,442 | INFO     | [job] validate thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,450 | INFO     | all job control threads have been joined
[2025-11-26 10:45:22] 2025-11-26 15:44:24,533 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,723 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:45:22] 2025-11-26 15:44:24,877 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:24,947 | INFO     | [payload] control thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:25,004 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:25,456 | INFO     | [job] control thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:25,743 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:28,214 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:45:22] 2025-11-26 15:44:52,106 | INFO     | PID=1219864 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:45:22] 2025-11-26 15:44:52,106 | INFO     | .. there are 35 such processes running
[2025-11-26 10:45:22] 2025-11-26 15:44:52,106 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:45:22] 2025-11-26 15:44:52,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:45:22] 2025-11-26 15:44:52,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:45:22] 2025-11-26 15:45:16,135 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:45:22] 2025-11-26 15:45:16,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849451169600)>', '<ExcThread(monitor, started 139848664987392)>']
[2025-11-26 10:45:22] 2025-11-26 15:45:17,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:45:22] 2025-11-26 15:45:17,286 | INFO     | [monitor] control thread has ended
[2025-11-26 10:45:22] 2025-11-26 15:45:21,947 | INFO     | all workflow threads have been joined
[2025-11-26 10:45:22] 2025-11-26 15:45:21,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:45:22] 2025-11-26 15:45:21,948 | INFO     | traces error code: 0
[2025-11-26 10:45:22] 2025-11-26 15:45:21,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:45:22] 2025-11-26 15:45:22,161 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:45:22] 2025-11-26 15:45:22,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:45:22] 2025-11-26 15:45:22,166 [wrapper] pilotpid: 1219864
[2025-11-26 10:45:22] 2025-11-26 15:45:22,169 [wrapper] Pilot exit status: 0
[2025-11-26 10:45:22] 2025-11-26 15:45:22,182 [wrapper] pandaids: 6895331073
[2025-11-26 10:45:22] 2025-11-26 15:45:22,288 [wrapper] cleanup supervisor_pilot  757493 1219865
[2025-11-26 10:45:22] 2025-11-26 15:45:22,292 [wrapper] Test setup, not cleaning
[2025-11-26 10:45:22] 2025-11-26 15:45:22,294 [wrapper] apfmon messages muted
[2025-11-26 10:45:22] 2025-11-26 15:45:22,297 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:45:22] 2025-11-26 15:45:22,300 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:45:22]  *** Error codes and diagnostics ***
[2025-11-26 10:45:22]     "exeErrorCode": 0,
[2025-11-26 10:45:22]     "exeErrorDiag": "",
[2025-11-26 10:45:22]     "pilotErrorCode": 0,
[2025-11-26 10:45:22]     "pilotErrorDiag": "",
[2025-11-26 10:45:22]  *** Listing of results directory ***
[2025-11-26 10:45:22] total 1302432
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 17:05 pilot3.tar.gz
[2025-11-26 10:45:22] -rwx------. 1 boincer umatlas     36292 Nov 21 17:25 runpilot2-wrapper.sh
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 17:25 queuedata.json
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas       100 Nov 25 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:45:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 18:21 run_atlas
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas       105 Nov 25 18:21 job.xml
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas 408774878 Nov 25 18:21 EVNT.47483658._000158.pool.root.1
[2025-11-26 10:45:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 18:21 shared
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 18:21 input.tar.gz
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 18:21 start_atlas.sh
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas         0 Nov 25 18:21 boinc_lockfile
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 18:21 pandaJob.out
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas        57 Nov 25 18:21 setup.sh.local
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas    991877 Nov 25 18:21 agis_schedconf.cvmfs.json
[2025-11-26 10:45:22] drwx------. 5 boincer umatlas      4096 Nov 25 18:21 pilot3
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:29 boinc_task_state.xml
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 10:40 init_data.xml
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas 901798240 Nov 26 10:42 HITS.47556137._001577.pool.root.1
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas      1063 Nov 26 10:43 memory_monitor_summary.json
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas        95 Nov 26 10:44 pilot_heartbeat.json
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas   2306699 Nov 26 10:44 log.47556137._001577.job.log.tgz.1
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas      8612 Nov 26 10:44 heartbeat.json
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas        29 Nov 26 10:45 wrapper_checkpoint.txt
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:45 boinc_mmap_file
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas      5011 Nov 26 10:45 pilotlog.txt
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas   7287041 Nov 26 10:45 log.47556137._001577.job.log.1
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas       353 Nov 26 10:45 output.list
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:45 runtime_log
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas   9615360 Nov 26 10:45 result.tar.gz
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas      9340 Nov 26 10:45 runtime_log.err
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas       664 Nov 26 10:45 1O5LDmPkog8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpkJKDmcoQs0n.diag
[2025-11-26 10:45:22] -rw-r--r--. 1 boincer umatlas     21458 Nov 26 10:45 stderr.txt
[2025-11-26 10:45:22] HITS file was successfully produced:
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas 901798240 Nov 26 10:42 shared/HITS.pool.root.1
[2025-11-26 10:45:22]  *** Contents of shared directory: ***
[2025-11-26 10:45:22] total 1289856
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas 408774878 Nov 25 18:21 ATLAS.root_0
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 18:21 input.tar.gz
[2025-11-26 10:45:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 18:21 start_atlas.sh
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas 901798240 Nov 26 10:42 HITS.pool.root.1
[2025-11-26 10:45:22] -rw-------. 1 boincer umatlas   9615360 Nov 26 10:45 result.tar.gz
10:45:24 (1216189): run_atlas exited; CPU time 186641.884343
10:45:24 (1216189): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN