Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:33 (2490266): wrapper (7.7.26015): starting
22:01:33 (2490266): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:01:33] Arguments: --nthreads 8
[2025-11-25 22:01:33] Threads: 8
[2025-11-25 22:01:33] Checking for CVMFS
[2025-11-25 22:01:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:01:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:01:34] 2.13.3.0 11754 29438 188044 153305 0 756 20526919 32935937 46819 16776704 0 158698559 99.574 165394978 36178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:01:34] CVMFS is ok
[2025-11-25 22:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:01:34] Further information can be found at the LHC@home message board.
[2025-11-25 22:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:01:34] Checking for apptainer binary...
[2025-11-25 22:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:01:34] Running /usr/bin/apptainer --version
[2025-11-25 22:01:34] apptainer version 1.4.4-1.el9
[2025-11-25 22:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:01:34] c7-2-38.aglt2.org
[2025-11-25 22:01:34] apptainer works
[2025-11-25 22:01:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:01:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:01:34] Starting ATLAS job with PandaID=6896451004
[2025-11-25 22:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:47:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:47:18] 2025-11-27 03:45:59,428 | INFO     | time since job start (89052s) is within the limit (172800.0s)
[2025-11-26 22:47:18] 2025-11-27 03:46:00,642 | INFO     | monitor loop #3671: job 0:6896451004 is in state 'finished'
[2025-11-26 22:47:18] 2025-11-27 03:46:00,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:47:18] 2025-11-27 03:46:01,439 | INFO     | time since job start (89054s) is within the limit (172800.0s)
[2025-11-26 22:47:18] 2025-11-27 03:46:03,147 | INFO     | monitor loop #3672: job 0:6896451004 is in state 'finished'
[2025-11-26 22:47:18] 2025-11-27 03:46:03,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:47:18] 2025-11-27 03:46:03,448 | INFO     | time since job start (89056s) is within the limit (172800.0s)
[2025-11-26 22:47:18] 2025-11-27 03:46:05,455 | INFO     | time since job start (89058s) is within the limit (172800.0s)
[2025-11-26 22:47:18] 2025-11-27 03:46:05,760 | INFO     | monitor loop #3673: job 0:6896451004 is in state 'finished'
[2025-11-26 22:47:18] 2025-11-27 03:46:05,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:47:18] 2025-11-27 03:46:07,462 | INFO     | time since job start (89060s) is within the limit (172800.0s)
[2025-11-26 22:47:18] 2025-11-27 03:46:08,322 | INFO     | monitor loop #3674: job 0:6896451004 is in state 'finished'
[2025-11-26 22:47:18] 2025-11-27 03:46:08,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:47:18] 2025-11-27 03:46:09,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 22:47:18] 2025-11-27 03:46:09,869 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3125.6781875
[2025-11-26 22:47:18] 2025-11-27 03:46:10,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896451004/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:47:18] 2025-11-27 03:46:10,113 | INFO     | extracted standard info from prmon json
[2025-11-26 22:47:18] 2025-11-27 03:46:10,113 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:47:18] 2025-11-27 03:46:10,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:47:18] 2025-11-27 03:46:10,269 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:47:18] 2025-11-27 03:46:10,270 | INFO     | sum of square deviations: 812551458524.439
[2025-11-26 22:47:18] 2025-11-27 03:46:10,478 | INFO     | sum of deviations: 35263222227249.47
[2025-11-26 22:47:18] 2025-11-27 03:46:10,479 | INFO     | mean x: 1764175993.6998208
[2025-11-26 22:47:18] 2025-11-27 03:46:10,479 | INFO     | mean y: 4768148.544802868
[2025-11-26 22:47:18] 2025-11-27 03:46:10,479 | INFO     | intersect: -76557189203.40836
[2025-11-26 22:47:18] 2025-11-27 03:46:10,480 | INFO     | chi2: 52.97713972908014
[2025-11-26 22:47:18] 2025-11-27 03:46:10,500 | INFO     | sum of square deviations: 804928914110.2344
[2025-11-26 22:47:18] 2025-11-27 03:46:10,771 | INFO     | sum of deviations: 36088595792957.22
[2025-11-26 22:47:18] 2025-11-27 03:46:10,771 | INFO     | mean x: 1764175818.3744373
[2025-11-26 22:47:18] 2025-11-27 03:46:10,771 | INFO     | mean y: 4787130.3240324035
[2025-11-26 22:47:18] 2025-11-27 03:46:10,772 | INFO     | intersect: -79091176377.71002
[2025-11-26 22:47:18] 2025-11-27 03:46:10,773 | INFO     | chi2: 47.325912771657556
[2025-11-26 22:47:18] 2025-11-27 03:46:10,773 | INFO     | current chi2=47.325912771657556 (change=10.667293452085943 %)
[2025-11-26 22:47:18] 2025-11-27 03:46:10,773 | INFO     | right removable region: 1110
[2025-11-26 22:47:18] 2025-11-27 03:46:10,774 | INFO     | sum of square deviations: 800130656721.723
[2025-11-26 22:47:18] 2025-11-27 03:46:10,884 | INFO     | monitor loop #3675: job 0:6896451004 is in state 'finished'
[2025-11-26 22:47:18] 2025-11-27 03:46:10,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:47:18] 2025-11-27 03:46:11,121 | INFO     | sum of deviations: 34371180712281.69
[2025-11-26 22:47:18] 2025-11-27 03:46:11,121 | INFO     | mean x: 1764176217.5049505
[2025-11-26 22:47:18] 2025-11-27 03:46:11,121 | INFO     | mean y: 4784214.786678668
[2025-11-26 22:47:18] 2025-11-27 03:46:11,121 | INFO     | intersect: -75778863206.7632
[2025-11-26 22:47:18] 2025-11-27 03:46:11,122 | INFO     | chi2: 51.15869021207782
[2025-11-26 22:47:18] 2025-11-27 03:46:11,122 | INFO     | current chi2=51.15869021207782 (change=3.4325173580561206 %)
[2025-11-26 22:47:18] 2025-11-27 03:46:11,122 | INFO     | left removable region: 10
[2025-11-26 22:47:18] 2025-11-27 03:46:11,141 | INFO     | sum of square deviations: 778818515849.023
[2025-11-26 22:47:18] 2025-11-27 03:46:11,451 | INFO     | sum of deviations: 34746145952205.38
[2025-11-26 22:47:18] 2025-11-27 03:46:11,452 | INFO     | mean x: 1764176232.0672727
[2025-11-26 22:47:18] 2025-11-27 03:46:11,452 | INFO     | mean y: 4817898.698181818
[2025-11-26 22:47:18] 2025-11-27 03:46:11,452 | INFO     | intersect: -78701997100.4256
[2025-11-26 22:47:18] 2025-11-27 03:46:11,453 | INFO     | chi2: 44.48020139384148
[2025-11-26 22:47:18] 2025-11-27 03:46:11,453 | INFO     | current memory leak: 44.61 B/s (using 1100 data points, chi2=44.48)
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | could have reported an average CPU frequency of 3203 MHz (41 samples)
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | ..............................
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | . Timing measurements:
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | . get job = 0 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | . initial setup = 2 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,859 | INFO     | . payload setup = 9 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,860 | INFO     | . stage-in = 0 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,860 | INFO     | . payload execution = 88957 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,860 | INFO     | . stage-out = 24 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,860 | INFO     | . log creation = 5 s
[2025-11-26 22:47:18] 2025-11-27 03:46:11,860 | INFO     | ..............................
[2025-11-26 22:47:18] 2025-11-27 03:46:13,569 | INFO     | 
[2025-11-26 22:47:18] 2025-11-27 03:46:13,574 | INFO     | job summary report
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | --------------------------------------------------
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | PanDA job id: 6896451004
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | task id: 47556149
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | errors: (none)
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | pilot state: finished 
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | transexitcode: 0
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | exeerrorcode: 0
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | exeerrordiag: 
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | exitcode: 0
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | exitmsg: OK
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | cpuconsumptiontime: 192795 s
[2025-11-26 22:47:18] 2025-11-27 03:46:13,575 | INFO     | nevents: 1000
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | neventsw: 0
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | pid: 2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | pgrp: 2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | corecount: 8
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | event service: False
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | sizes: {0: 2283487, 1: 2284343, 7: 2284605, 12: 2284633, 88973: 2340311, 88974: 2340310, 89000: 2349488, 89001: 2349544, 89049: 2349664}
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | --------------------------------------------------
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | 
[2025-11-26 22:47:18] 2025-11-27 03:46:13,576 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 22:47:18] 2025-11-27 03:46:13,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:47:18] 2025-11-27 03:46:13,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:47:18] 2025-11-27 03:46:13,845 | INFO     | job 6896451004 has completed (purged errors)
[2025-11-26 22:47:18] 2025-11-27 03:46:13,845 | INFO     | overall cleanup function is called
[2025-11-26 22:47:18] 2025-11-27 03:46:15,260 | INFO     | --- collectZombieJob: --- 10, [2523469]
[2025-11-26 22:47:18] 2025-11-27 03:46:15,260 | INFO     | zombie collector waiting for pid 2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:15,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:47:18] 2025-11-27 03:46:15,261 | INFO     | collected zombie processes
[2025-11-26 22:47:18] 2025-11-27 03:46:15,261 | INFO     | will attempt to kill all subprocesses of pid=2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:16,611 | INFO     | PID=2498454 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:47:18] 2025-11-27 03:46:16,611 | INFO     | .. there are 23 such processes running
[2025-11-26 22:47:18] 2025-11-27 03:46:19,559 | INFO     | process IDs to be killed: [2523469] (in reverse order)
[2025-11-26 22:47:18] 2025-11-27 03:46:20,540 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:47:18] 2025-11-27 03:46:20,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:47:18] 2025-11-27 03:46:20,667 | INFO     | did not find any defunct processes belonging to 2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:20,871 | INFO     | did not find any defunct processes belonging to 2523469
[2025-11-26 22:47:18] 2025-11-27 03:46:20,914 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:47:18] 2025-11-27 03:46:20,915 | INFO     | ready for new job
[2025-11-26 22:47:18] 2025-11-27 03:46:20,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:47:18] 2025-11-27 03:46:20,938 | INFO     | ***************************************
[2025-11-26 22:47:18] 2025-11-27 03:46:20,938 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:47:18] 2025-11-27 03:46:20,938 | INFO     | ***************************************
[2025-11-26 22:47:18] 2025-11-27 03:46:20,939 | INFO     | 
[2025-11-26 22:47:18] 2025-11-27 03:46:20,952 | INFO     | architecture information:
[2025-11-26 22:47:18] 2025-11-27 03:46:20,953 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:47:18] 2025-11-27 03:46:21,108 | INFO     | cat /etc/os-release:
[2025-11-26 22:47:18] NAME="CentOS Linux"
[2025-11-26 22:47:18] VERSION="7 (Core)"
[2025-11-26 22:47:18] ID="centos"
[2025-11-26 22:47:18] ID_LIKE="rhel fedora"
[2025-11-26 22:47:18] VERSION_ID="7"
[2025-11-26 22:47:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:47:18] ANSI_COLOR="0;31"
[2025-11-26 22:47:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:47:18] HOME_URL="https://www.centos.org/"
[2025-11-26 22:47:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:47:18] 
[2025-11-26 22:47:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:47:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:47:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:47:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:47:18] 
[2025-11-26 22:47:18] 2025-11-27 03:46:21,108 | INFO     | ***************************************
[2025-11-26 22:47:18] 2025-11-27 03:46:21,615 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 22:47:18] 2025-11-27 03:46:21,831 | INFO     | sufficient remaining disk space (62870519808 B)
[2025-11-26 22:47:18] 2025-11-27 03:46:21,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:47:18] 2025-11-27 03:46:21,831 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:47:18] 2025-11-27 03:46:21,831 | INFO     | update_server=False
[2025-11-26 22:47:18] 2025-11-27 03:46:21,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:47:18] 2025-11-27 03:46:21,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:47:18] 2025-11-27 03:46:22,000 | INFO     | all data control threads have been joined
[2025-11-26 22:47:18] 2025-11-27 03:46:22,046 | INFO     | all payload control threads have been joined
[2025-11-26 22:47:18] 2025-11-27 03:46:22,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:47:18] 2025-11-27 03:46:22,140 | INFO     | aborting loop
[2025-11-26 22:47:18] 2025-11-27 03:46:22,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:47:18] 2025-11-27 03:46:22,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:47:18] 2025-11-27 03:46:22,837 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:22,887 | INFO     | all job control threads have been joined
[2025-11-26 22:47:18] 2025-11-27 03:46:23,006 | INFO     | [data] control thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,052 | INFO     | [payload] control thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,145 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,151 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,172 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,837 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,879 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,894 | INFO     | [job] control thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:23,969 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:24,025 | INFO     | [job] validate thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:24,044 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:24,111 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:24,236 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:46:26,750 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:47:18] 2025-11-27 03:47:01,370 | INFO     | PID=2498454 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:47:18] 2025-11-27 03:47:01,370 | INFO     | .. there are 23 such processes running
[2025-11-26 22:47:18] 2025-11-27 03:47:01,389 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:47:18] 2025-11-27 03:47:01,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:47:18] 2025-11-27 03:47:01,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:47:18] 2025-11-27 03:47:02,501 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:47:18] 2025-11-27 03:47:03,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662865631040)>', '<ExcThread(monitor, started 139662362388224)>']
[2025-11-26 22:47:18] 2025-11-27 03:47:04,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:47:18] 2025-11-27 03:47:04,408 | INFO     | [monitor] control thread has ended
[2025-11-26 22:47:18] 2025-11-27 03:47:08,619 | INFO     | all workflow threads have been joined
[2025-11-26 22:47:18] 2025-11-27 03:47:08,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:47:18] 2025-11-27 03:47:08,620 | INFO     | traces error code: 0
[2025-11-26 22:47:18] 2025-11-27 03:47:08,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:47:18] 2025-11-27 03:47:16,110 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:47:18] 2025-11-27 03:47:16,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:47:18] 2025-11-27 03:47:16,215 [wrapper] pilotpid: 2498454
[2025-11-26 22:47:18] 2025-11-27 03:47:16,243 [wrapper] Pilot exit status: 0
[2025-11-26 22:47:18] 2025-11-27 03:47:16,375 [wrapper] pandaids: 6896451004
[2025-11-26 22:47:18] 2025-11-27 03:47:17,233 [wrapper] cleanup supervisor_pilot 3403582 2498455
[2025-11-26 22:47:18] 2025-11-27 03:47:17,278 [wrapper] Test setup, not cleaning
[2025-11-26 22:47:18] 2025-11-27 03:47:17,320 [wrapper] apfmon messages muted
[2025-11-26 22:47:18] 2025-11-27 03:47:17,331 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:47:18] 2025-11-27 03:47:17,353 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:47:18]  *** Error codes and diagnostics ***
[2025-11-26 22:47:18]     "exeErrorCode": 0,
[2025-11-26 22:47:18]     "exeErrorDiag": "",
[2025-11-26 22:47:18]     "pilotErrorCode": 0,
[2025-11-26 22:47:18]     "pilotErrorDiag": "",
[2025-11-26 22:47:18]  *** Listing of results directory ***
[2025-11-26 22:47:18] total 1305220
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:21 queuedata.json
[2025-11-26 22:47:18] -rwx------. 1 boincer umatlas     36292 Nov 24 23:24 runpilot2-wrapper.sh
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:47:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:01 run_atlas
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:01 job.xml
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas 410965547 Nov 25 22:01 EVNT.47483658._001508.pool.root.1
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:01 start_atlas.sh
[2025-11-26 22:47:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:01 shared
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas    590112 Nov 25 22:01 input.tar.gz
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:01 boinc_lockfile
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:01 pandaJob.out
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas        57 Nov 25 22:01 setup.sh.local
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas    991877 Nov 25 22:01 agis_schedconf.cvmfs.json
[2025-11-26 22:47:18] drwx------. 5 boincer umatlas      4096 Nov 25 22:01 pilot3
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:06 boinc_task_state.xml
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 22:40 init_data.xml
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas 901295020 Nov 26 22:42 HITS.47556149._004944.pool.root.1
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas      1074 Nov 26 22:44 memory_monitor_summary.json
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas   2184409 Nov 26 22:45 log.47556149._004944.job.log.tgz.1
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas      8640 Nov 26 22:46 heartbeat.json
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas        98 Nov 26 22:47 pilot_heartbeat.json
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas      4824 Nov 26 22:47 pilotlog.txt
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas   7996289 Nov 26 22:47 log.47556149._004944.job.log.1
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas       353 Nov 26 22:47 output.list
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:47 runtime_log
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas  10199040 Nov 26 22:47 result.tar.gz
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 22:47 runtime_log.err
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas       667 Nov 26 22:47 ARCODmmmzh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3JJKDmodkY8m.diag
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:47 wrapper_checkpoint.txt
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:47 boinc_mmap_file
[2025-11-26 22:47:18] -rw-r--r--. 1 boincer umatlas     21856 Nov 26 22:47 stderr.txt
[2025-11-26 22:47:18] HITS file was successfully produced:
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas 901295020 Nov 26 22:42 shared/HITS.pool.root.1
[2025-11-26 22:47:18]  *** Contents of shared directory: ***
[2025-11-26 22:47:18] total 1292072
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas 410965547 Nov 25 22:01 ATLAS.root_0
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:01 start_atlas.sh
[2025-11-26 22:47:18] -rw-r--r--. 2 boincer umatlas    590112 Nov 25 22:01 input.tar.gz
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas 901295020 Nov 26 22:42 HITS.pool.root.1
[2025-11-26 22:47:18] -rw-------. 1 boincer umatlas  10199040 Nov 26 22:47 result.tar.gz
22:47:20 (2490266): run_atlas exited; CPU time 193765.607369
22:47:20 (2490266): called boinc_finish(0)

</stderr_txt>
]]>

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