Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:07:05 (14116): wrapper (7.7.26015): starting
19:07:05 (14116): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:07:05] Arguments: --nthreads 8
[2025-11-25 19:07:05] Threads: 8
[2025-11-25 19:07:05] Checking for CVMFS
[2025-11-25 19:07:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:07:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:07:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:07:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:07:05] 2.11.2.0 31887 5646 69400 153302 1 82 10836299 20275201 1 130560 0 1933498 99.979 203240 38426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 19:07:05] CVMFS is ok
[2025-11-25 19:07:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:07:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:07:05] Further information can be found at the LHC@home message board.
[2025-11-25 19:07:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:07:05] Checking for apptainer binary...
[2025-11-25 19:07:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:07:05] Running /usr/bin/apptainer --version
[2025-11-25 19:07:05] apptainer version 1.3.2-1.el7
[2025-11-25 19:07:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:07:07] c-204-12.aglt2.org
[2025-11-25 19:07:07] apptainer works
[2025-11-25 19:07:07] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:07:07] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:07:07] Starting ATLAS job with PandaID=6896450036
[2025-11-25 19:07:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:35:45]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:35:45] 2025-11-26 12:34:50,225 | INFO     | monitor loop #3297: job 0:6896450036 is in state 'finished'
[2025-11-26 07:35:45] 2025-11-26 12:34:50,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,256 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:35:45] 2025-11-26 12:34:50,260 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-26 07:35:45] 2025-11-26 12:34:50,262 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896450036/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,263 | INFO     | extracted standard info from prmon json
[2025-11-26 07:35:45] 2025-11-26 12:34:50,263 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:35:45] 2025-11-26 12:34:50,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:35:45] 2025-11-26 12:34:50,276 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:35:45] 2025-11-26 12:34:50,277 | INFO     | sum of square deviations: 123122806684.00006
[2025-11-26 07:35:45] 2025-11-26 12:34:50,288 | INFO     | sum of deviations: 837828613461.572
[2025-11-26 07:35:45] 2025-11-26 12:34:50,289 | INFO     | mean x: 1764138064.5714285
[2025-11-26 07:35:45] 2025-11-26 12:34:50,289 | INFO     | mean y: 2862514.5605442175
[2025-11-26 07:35:45] 2025-11-26 12:34:50,289 | INFO     | intersect: -12001780560.12283
[2025-11-26 07:35:45] 2025-11-26 12:34:50,290 | INFO     | chi2: 5.862075218179567
[2025-11-26 07:35:45] 2025-11-26 12:34:50,291 | INFO     | sum of square deviations: 120627269384.85619
[2025-11-26 07:35:45] 2025-11-26 12:34:50,301 | INFO     | sum of deviations: 1073627601577.4318
[2025-11-26 07:35:45] 2025-11-26 12:34:50,301 | INFO     | mean x: 1764137912.0753424
[2025-11-26 07:35:45] 2025-11-26 12:34:50,302 | INFO     | mean y: 2876915.9739726027
[2025-11-26 07:35:45] 2025-11-26 12:34:50,302 | INFO     | intersect: -15698607209.895235
[2025-11-26 07:35:45] 2025-11-26 12:34:50,302 | INFO     | chi2: 2.8602789847887844
[2025-11-26 07:35:45] 2025-11-26 12:34:50,303 | INFO     | current chi2=2.8602789847887844 (change=51.207057597650085 %)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,303 | INFO     | sum of square deviations: 118165686210.68979
[2025-11-26 07:35:45] 2025-11-26 12:34:50,314 | INFO     | sum of deviations: 1158409330314.8203
[2025-11-26 07:35:45] 2025-11-26 12:34:50,314 | INFO     | mean x: 1764137759.5793104
[2025-11-26 07:35:45] 2025-11-26 12:34:50,314 | INFO     | mean y: 2882160.08137931
[2025-11-26 07:35:45] 2025-11-26 12:34:50,315 | INFO     | intersect: -17291424725.367775
[2025-11-26 07:35:45] 2025-11-26 12:34:50,315 | INFO     | chi2: 2.315191376224563
[2025-11-26 07:35:45] 2025-11-26 12:34:50,316 | INFO     | current chi2=2.315191376224563 (change=19.057148322350557 %)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,316 | INFO     | right removable region: 724
[2025-11-26 07:35:45] 2025-11-26 12:34:50,316 | INFO     | sum of square deviations: 120627057776.00552
[2025-11-26 07:35:45] 2025-11-26 12:34:50,327 | INFO     | sum of deviations: 645374516216.4244
[2025-11-26 07:35:45] 2025-11-26 12:34:50,327 | INFO     | mean x: 1764138217.0739727
[2025-11-26 07:35:45] 2025-11-26 12:34:50,328 | INFO     | mean y: 2874254.7328767125
[2025-11-26 07:35:45] 2025-11-26 12:34:50,328 | INFO     | intersect: -9435554149.093208
[2025-11-26 07:35:45] 2025-11-26 12:34:50,328 | INFO     | chi2: 3.8078333443491643
[2025-11-26 07:35:45] 2025-11-26 12:34:50,329 | INFO     | current chi2=3.8078333443491643 (change=35.04291223455736 %)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,329 | INFO     | sum of square deviations: 118165262993.00146
[2025-11-26 07:35:45] 2025-11-26 12:34:50,340 | INFO     | sum of deviations: 600210761314.2097
[2025-11-26 07:35:45] 2025-11-26 12:34:50,340 | INFO     | mean x: 1764138369.5765517
[2025-11-26 07:35:45] 2025-11-26 12:34:50,341 | INFO     | mean y: 2877052.6358620687
[2025-11-26 07:35:45] 2025-11-26 12:34:50,341 | INFO     | intersect: -8957919098.851255
[2025-11-26 07:35:45] 2025-11-26 12:34:50,341 | INFO     | chi2: 3.7603769176628465
[2025-11-26 07:35:45] 2025-11-26 12:34:50,342 | INFO     | current chi2=3.7603769176628465 (change=1.2462842355415382 %)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,342 | INFO     | left removable region: 20
[2025-11-26 07:35:45] 2025-11-26 12:34:50,342 | INFO     | sum of square deviations: 108191893404.88647
[2025-11-26 07:35:45] 2025-11-26 12:34:50,353 | INFO     | sum of deviations: 844787032829.5404
[2025-11-26 07:35:45] 2025-11-26 12:34:50,353 | INFO     | mean x: 1764138339.0852273
[2025-11-26 07:35:45] 2025-11-26 12:34:50,353 | INFO     | mean y: 2902728.4076704546
[2025-11-26 07:35:45] 2025-11-26 12:34:50,353 | INFO     | intersect: -13771892647.428988
[2025-11-26 07:35:45] 2025-11-26 12:34:50,354 | INFO     | chi2: 0.12385474079806143
[2025-11-26 07:35:45] 2025-11-26 12:34:50,354 | INFO     | current memory leak: 7.81 B/s (using 704 data points, chi2=0.12)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | could have reported an average CPU frequency of 2181 MHz (28 samples)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | ..............................
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . Timing measurements:
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . get job = 0 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . initial setup = 2 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . payload setup = 8 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . stage-in = 0 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,355 | INFO     | . payload execution = 44802 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,356 | INFO     | . stage-out = 3 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,356 | INFO     | . log creation = 0 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,356 | INFO     | ..............................
[2025-11-26 07:35:45] 2025-11-26 12:34:50,878 | INFO     | 
[2025-11-26 07:35:45] 2025-11-26 12:34:50,878 | INFO     | job summary report
[2025-11-26 07:35:45] 2025-11-26 12:34:50,884 | INFO     | --------------------------------------------------
[2025-11-26 07:35:45] 2025-11-26 12:34:50,884 | INFO     | PanDA job id: 6896450036
[2025-11-26 07:35:45] 2025-11-26 12:34:50,884 | INFO     | task id: 47556149
[2025-11-26 07:35:45] 2025-11-26 12:34:50,884 | INFO     | errors: (none)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | pilot state: finished 
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | transexitcode: 0
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | exeerrorcode: 0
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | exeerrordiag: 
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | exitcode: 0
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | exitmsg: OK
[2025-11-26 07:35:45] 2025-11-26 12:34:50,885 | INFO     | cpuconsumptiontime: 346809 s
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | nevents: 1000
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | neventsw: 0
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | pid: 24260
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | pgrp: 24260
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | corecount: 8
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | event service: False
[2025-11-26 07:35:45] 2025-11-26 12:34:50,886 | INFO     | sizes: {0: 2284138, 1: 2284337, 6: 2284599, 12: 2284627, 44815: 2330494, 44819: 2339672, 44829: 2339862}
[2025-11-26 07:35:45] 2025-11-26 12:34:50,887 | INFO     | --------------------------------------------------
[2025-11-26 07:35:45] 2025-11-26 12:34:50,887 | INFO     | 
[2025-11-26 07:35:45] 2025-11-26 12:34:50,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 07:35:45] 2025-11-26 12:34:50,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:35:45] 2025-11-26 12:34:50,919 | INFO     | job 6896450036 has completed (purged errors)
[2025-11-26 07:35:45] 2025-11-26 12:34:50,919 | INFO     | overall cleanup function is called
[2025-11-26 07:35:45] 2025-11-26 12:34:51,935 | INFO     | --- collectZombieJob: --- 10, [24260]
[2025-11-26 07:35:45] 2025-11-26 12:34:51,935 | INFO     | zombie collector waiting for pid 24260
[2025-11-26 07:35:45] 2025-11-26 12:34:51,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:35:45] 2025-11-26 12:34:51,935 | INFO     | collected zombie processes
[2025-11-26 07:35:45] 2025-11-26 12:34:51,935 | INFO     | will attempt to kill all subprocesses of pid=24260
[2025-11-26 07:35:45] 2025-11-26 12:34:52,023 | INFO     | process IDs to be killed: [24260] (in reverse order)
[2025-11-26 07:35:45] 2025-11-26 12:34:52,080 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:35:45] 2025-11-26 12:34:52,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:35:45] 2025-11-26 12:34:52,085 | INFO     | did not find any defunct processes belonging to 24260
[2025-11-26 07:35:45] 2025-11-26 12:34:52,088 | INFO     | did not find any defunct processes belonging to 24260
[2025-11-26 07:35:45] 2025-11-26 12:34:52,090 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:35:45] 2025-11-26 12:34:52,091 | INFO     | ready for new job
[2025-11-26 07:35:45] 2025-11-26 12:34:52,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:35:45] 2025-11-26 12:34:52,094 | INFO     | ***************************************
[2025-11-26 07:35:45] 2025-11-26 12:34:52,094 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:35:45] 2025-11-26 12:34:52,094 | INFO     | ***************************************
[2025-11-26 07:35:45] 2025-11-26 12:34:52,094 | INFO     | 
[2025-11-26 07:35:45] 2025-11-26 12:34:52,095 | INFO     | architecture information:
[2025-11-26 07:35:45] 2025-11-26 12:34:52,096 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:35:45] 2025-11-26 12:34:52,115 | INFO     | cat /etc/os-release:
[2025-11-26 07:35:45] NAME="CentOS Linux"
[2025-11-26 07:35:45] VERSION="7 (Core)"
[2025-11-26 07:35:45] ID="centos"
[2025-11-26 07:35:45] ID_LIKE="rhel fedora"
[2025-11-26 07:35:45] VERSION_ID="7"
[2025-11-26 07:35:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:35:45] ANSI_COLOR="0;31"
[2025-11-26 07:35:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:35:45] HOME_URL="https://www.centos.org/"
[2025-11-26 07:35:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:35:45] 
[2025-11-26 07:35:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:35:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:35:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:35:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:35:45] 
[2025-11-26 07:35:45] 2025-11-26 12:34:52,115 | INFO     | ***************************************
[2025-11-26 07:35:45] 2025-11-26 12:34:52,619 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 07:35:45] 2025-11-26 12:34:52,639 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-11-26 07:35:45] 2025-11-26 12:34:52,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:35:45] 2025-11-26 12:34:52,640 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:35:45] 2025-11-26 12:34:52,640 | INFO     | update_server=False
[2025-11-26 07:35:45] 2025-11-26 12:34:52,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:35:45] 2025-11-26 12:34:52,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:35:45] 2025-11-26 12:34:52,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:35:45] 2025-11-26 12:34:52,728 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 07:35:45] 2025-11-26 12:34:52,729 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 07:35:45] 2025-11-26 12:34:52,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:35:45] 2025-11-26 12:34:52,729 | INFO     | will abort loop
[2025-11-26 07:35:45] 2025-11-26 12:34:53,095 | INFO     | all payload control threads have been joined
[2025-11-26 07:35:45] 2025-11-26 12:34:53,156 | INFO     | all data control threads have been joined
[2025-11-26 07:35:45] 2025-11-26 12:34:53,647 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:53,710 | INFO     | all job control threads have been joined
[2025-11-26 07:35:45] 2025-11-26 12:34:53,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:53,735 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:53,833 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,100 | INFO     | [payload] control thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,162 | INFO     | [data] control thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,325 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,413 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,647 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,683 | INFO     | [job] validate thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,712 | INFO     | [job] control thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:54,721 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:55,057 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:55,062 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:55,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:35:45] 2025-11-26 12:34:56,461 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:34:56,648 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:35:45] 2025-11-26 12:35:23,120 | INFO     | PID=17818 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:35:45] 2025-11-26 12:35:23,120 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:35:45] 2025-11-26 12:35:23,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:35:45] 2025-11-26 12:35:23,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:35:45] 2025-11-26 12:35:38,584 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:35:45] 2025-11-26 12:35:39,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632958625600)>', '<ExcThread(monitor, started 140632353908480)>']
[2025-11-26 07:35:45] 2025-11-26 12:35:40,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:35:45] 2025-11-26 12:35:40,207 | INFO     | [monitor] control thread has ended
[2025-11-26 07:35:45] 2025-11-26 12:35:44,924 | INFO     | all workflow threads have been joined
[2025-11-26 07:35:45] 2025-11-26 12:35:44,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:35:45] 2025-11-26 12:35:44,925 | INFO     | traces error code: 0
[2025-11-26 07:35:45] 2025-11-26 12:35:44,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:35:45] 2025-11-26 12:35:45,047 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:35:45] 2025-11-26 12:35:45,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:35:45] 2025-11-26 12:35:45,058 [wrapper] pilotpid: 17818
[2025-11-26 07:35:45] 2025-11-26 12:35:45,063 [wrapper] Pilot exit status: 0
[2025-11-26 07:35:45] 2025-11-26 12:35:45,081 [wrapper] pandaids: 6896450036
[2025-11-26 07:35:45] 2025-11-26 12:35:45,137 [wrapper] cleanup supervisor_pilot  8780 17819
[2025-11-26 07:35:45] 2025-11-26 12:35:45,143 [wrapper] Test setup, not cleaning
[2025-11-26 07:35:45] 2025-11-26 12:35:45,148 [wrapper] apfmon messages muted
[2025-11-26 07:35:45] 2025-11-26 12:35:45,153 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:35:45] 2025-11-26 12:35:45,158 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:35:45]  *** Error codes and diagnostics ***
[2025-11-26 07:35:45]     "exeErrorCode": 0,
[2025-11-26 07:35:45]     "exeErrorDiag": "",
[2025-11-26 07:35:45]     "pilotErrorCode": 0,
[2025-11-26 07:35:45]     "pilotErrorDiag": "",
[2025-11-26 07:35:45]  *** Listing of results directory ***
[2025-11-26 07:35:45] total 1315168
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 07:35:45] -rwx------ 1 boincer umatlas     36292 Nov 24 22:30 runpilot2-wrapper.sh
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 22:30 queuedata.json
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas       100 Nov 25 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:35:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 19:06 run_atlas
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas       105 Nov 25 19:06 job.xml
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas 409757132 Nov 25 19:07 EVNT.47483658._001492.pool.root.1
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:07 start_atlas.sh
[2025-11-26 07:35:45] drwxrwx--x 2 boincer umatlas      4096 Nov 25 19:07 shared
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas    590110 Nov 25 19:07 input.tar.gz
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas         0 Nov 25 19:07 boinc_lockfile
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 19:07 pandaJob.out
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas        57 Nov 25 19:07 setup.sh.local
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas    991877 Nov 25 19:07 agis_schedconf.cvmfs.json
[2025-11-26 07:35:45] drwx------ 5 boincer umatlas      4096 Nov 25 19:07 pilot3
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas       532 Nov 26 07:23 boinc_task_state.xml
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 07:31 init_data.xml
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas 916724893 Nov 26 07:34 HITS.47556149._004781.pool.root.1
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas        95 Nov 26 07:34 pilot_heartbeat.json
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas      1062 Nov 26 07:34 memory_monitor_summary.json
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas   1516240 Nov 26 07:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas   1981596 Nov 26 07:34 log.47556149._004781.job.log.tgz.1
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas      8654 Nov 26 07:34 heartbeat.json
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:35 boinc_mmap_file
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:35 wrapper_checkpoint.txt
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas      4932 Nov 26 07:35 pilotlog.txt
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas   6181761 Nov 26 07:35 log.47556149._004781.job.log.1
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas       353 Nov 26 07:35 output.list
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:35 runtime_log
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas   8181760 Nov 26 07:35 result.tar.gz
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas       668 Nov 26 07:35 vCcMDmYwyh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNIJKDmUzooYm.diag
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 07:35 runtime_log.err
[2025-11-26 07:35:45] -rw-r--r-- 1 boincer umatlas     21291 Nov 26 07:35 stderr.txt
[2025-11-26 07:35:45] HITS file was successfully produced:
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas 916724893 Nov 26 07:34 shared/HITS.pool.root.1
[2025-11-26 07:35:45]  *** Contents of shared directory: ***
[2025-11-26 07:35:45] total 1303992
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas 409757132 Nov 25 19:07 ATLAS.root_0
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 19:07 start_atlas.sh
[2025-11-26 07:35:45] -rw-r--r-- 2 boincer umatlas    590110 Nov 25 19:07 input.tar.gz
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas 916724893 Nov 26 07:34 HITS.pool.root.1
[2025-11-26 07:35:45] -rw------- 1 boincer umatlas   8181760 Nov 26 07:35 result.tar.gz
07:35:46 (14116): run_atlas exited; CPU time 343004.156373
07:35:46 (14116): called boinc_finish(0)

</stderr_txt>
]]>

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