Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:54:47 (1040839): wrapper (7.7.26015): starting
19:54:47 (1040839): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:54:47] Arguments: --nthreads 9
[2025-11-25 19:54:47] Threads: 9
[2025-11-25 19:54:47] Checking for CVMFS
[2025-11-25 19:54:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:54:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:54:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:54:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:54:48] 2.13.3.0 9366 29310 331488 153303 3 263 27047891 32935937 24437 16776704 0 194909800 99.812 93950675 32999 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:54:48] CVMFS is ok
[2025-11-25 19:54:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:54:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:54:48] Further information can be found at the LHC@home message board.
[2025-11-25 19:54:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:54:48] Checking for apptainer binary...
[2025-11-25 19:54:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:54:48] Running /usr/bin/apptainer --version
[2025-11-25 19:54:48] apptainer version 1.4.4-1.el9
[2025-11-25 19:54:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:54:48] c-6-2.aglt2.org
[2025-11-25 19:54:48] apptainer works
[2025-11-25 19:54:48] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:54:48] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:54:48] Starting ATLAS job with PandaID=6896451221
[2025-11-25 19:54:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:19:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:19:06] 2025-11-26 15:18:33,305 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:19:06] 2025-11-26 15:18:33,306 | INFO     | sum of square deviations: 189090691169.5424
[2025-11-26 10:19:06] 2025-11-26 15:18:33,325 | INFO     | sum of deviations: 1821483483956.8408
[2025-11-26 10:19:06] 2025-11-26 15:18:33,325 | INFO     | mean x: 1764144422.087264
[2025-11-26 10:19:06] 2025-11-26 15:18:33,325 | INFO     | mean y: 3056075.6238207547
[2025-11-26 10:19:06] 2025-11-26 15:18:33,325 | INFO     | intersect: -16990693898.37874
[2025-11-26 10:19:06] 2025-11-26 15:18:33,327 | INFO     | chi2: 7.31589624802828
[2025-11-26 10:19:06] 2025-11-26 15:18:33,328 | INFO     | sum of square deviations: 185766053296.87082
[2025-11-26 10:19:06] 2025-11-26 15:18:33,346 | INFO     | sum of deviations: 2109908122847.8677
[2025-11-26 10:19:06] 2025-11-26 15:18:33,346 | INFO     | mean x: 1764144269.5966785
[2025-11-26 10:19:06] 2025-11-26 15:18:33,346 | INFO     | mean y: 3069305.9525504154
[2025-11-26 10:19:06] 2025-11-26 15:18:33,346 | INFO     | intersect: -20033865635.810837
[2025-11-26 10:19:06] 2025-11-26 15:18:33,348 | INFO     | chi2: 4.394831076881613
[2025-11-26 10:19:06] 2025-11-26 15:18:33,348 | INFO     | current chi2=4.394831076881613 (change=39.927646211958354 %)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,349 | INFO     | sum of square deviations: 182480625461.5478
[2025-11-26 10:19:06] 2025-11-26 15:18:33,371 | INFO     | sum of deviations: 2281356141266.057
[2025-11-26 10:19:06] 2025-11-26 15:18:33,372 | INFO     | mean x: 1764144117.1062052
[2025-11-26 10:19:06] 2025-11-26 15:18:33,372 | INFO     | mean y: 3077251.1229116945
[2025-11-26 10:19:06] 2025-11-26 15:18:33,372 | INFO     | intersect: -22052091649.460987
[2025-11-26 10:19:06] 2025-11-26 15:18:33,373 | INFO     | chi2: 2.978363313159595
[2025-11-26 10:19:06] 2025-11-26 15:18:33,374 | INFO     | current chi2=2.978363313159595 (change=32.23031190375317 %)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,375 | INFO     | sum of square deviations: 179233869012.4172
[2025-11-26 10:19:06] 2025-11-26 15:18:33,392 | INFO     | sum of deviations: 2265810714256.4644
[2025-11-26 10:19:06] 2025-11-26 15:18:33,392 | INFO     | mean x: 1764143964.6086435
[2025-11-26 10:19:06] 2025-11-26 15:18:33,393 | INFO     | mean y: 3076517.6854741895
[2025-11-26 10:19:06] 2025-11-26 15:18:33,393 | INFO     | intersect: -22298602950.184612
[2025-11-26 10:19:06] 2025-11-26 15:18:33,394 | INFO     | chi2: 2.9404152519671354
[2025-11-26 10:19:06] 2025-11-26 15:18:33,394 | INFO     | current chi2=2.9404152519671354 (change=1.27412465177737 %)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,394 | INFO     | right removable region: 832
[2025-11-26 10:19:06] 2025-11-26 15:18:33,395 | INFO     | sum of square deviations: 185765232236.87085
[2025-11-26 10:19:06] 2025-11-26 15:18:33,411 | INFO     | sum of deviations: 1528489804779.54
[2025-11-26 10:19:06] 2025-11-26 15:18:33,411 | INFO     | mean x: 1764144574.5966785
[2025-11-26 10:19:06] 2025-11-26 15:18:33,411 | INFO     | mean y: 3069502.692763938
[2025-11-26 10:19:06] 2025-11-26 15:18:33,411 | INFO     | intersect: -14512440014.125006
[2025-11-26 10:19:06] 2025-11-26 15:18:33,413 | INFO     | chi2: 4.584704344155455
[2025-11-26 10:19:06] 2025-11-26 15:18:33,413 | INFO     | current chi2=4.584704344155455 (change=37.33229410694436 %)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,414 | INFO     | sum of square deviations: 182479292012.77927
[2025-11-26 10:19:06] 2025-11-26 15:18:33,430 | INFO     | sum of deviations: 1464317812761.5757
[2025-11-26 10:19:06] 2025-11-26 15:18:33,430 | INFO     | mean x: 1764144727.0990453
[2025-11-26 10:19:06] 2025-11-26 15:18:33,431 | INFO     | mean y: 3072479.968973747
[2025-11-26 10:19:06] 2025-11-26 15:18:33,431 | INFO     | intersect: -14153429990.457266
[2025-11-26 10:19:06] 2025-11-26 15:18:33,432 | INFO     | chi2: 4.542182926760297
[2025-11-26 10:19:06] 2025-11-26 15:18:33,432 | INFO     | current chi2=4.542182926760297 (change=0.9274625843510134 %)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,432 | INFO     | left removable region: 20
[2025-11-26 10:19:06] 2025-11-26 15:18:33,433 | INFO     | sum of square deviations: 166016894611.68448
[2025-11-26 10:19:06] 2025-11-26 15:18:33,448 | INFO     | sum of deviations: 1814431076742.9067
[2025-11-26 10:19:06] 2025-11-26 15:18:33,449 | INFO     | mean x: 1764144544.1231527
[2025-11-26 10:19:06] 2025-11-26 15:18:33,449 | INFO     | mean y: 3097610.2709359606
[2025-11-26 10:19:06] 2025-11-26 15:18:33,449 | INFO     | intersect: -19277582781.989647
[2025-11-26 10:19:06] 2025-11-26 15:18:33,450 | INFO     | chi2: 0.11857257724121634
[2025-11-26 10:19:06] 2025-11-26 15:18:33,450 | INFO     | current memory leak: 10.93 B/s (using 812 data points, chi2=0.12)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | could have reported an average CPU frequency of 2599 MHz (32 samples)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | ..............................
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | . Timing measurements:
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | . get job = 0 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | . initial setup = 4 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | . payload setup = 15 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,452 | INFO     | . stage-in = 0 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,453 | INFO     | . payload execution = 51720 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,453 | INFO     | . stage-out = 4 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,453 | INFO     | . log creation = 0 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,453 | INFO     | ..............................
[2025-11-26 10:19:06] 2025-11-26 15:18:33,569 | INFO     | 
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | job summary report
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | --------------------------------------------------
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | PanDA job id: 6896451221
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | task id: 47556161
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | errors: (none)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | pilot state: finished 
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | transexitcode: 0
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | exeerrorcode: 0
[2025-11-26 10:19:06] 2025-11-26 15:18:33,570 | INFO     | exeerrordiag: 
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | exitcode: 0
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | exitmsg: OK
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | cpuconsumptiontime: 295757 s
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | nevents: 1000
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | neventsw: 0
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | pid: 1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | pgrp: 1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | corecount: 9
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | event service: False
[2025-11-26 10:19:06] 2025-11-26 15:18:33,571 | INFO     | sizes: {0: 2284085, 1: 2284284, 12: 2284574, 23: 2284574, 51740: 2333546, 51741: 2333545, 51745: 2342723, 51747: 2342779, 51755: 2343053}
[2025-11-26 10:19:06] 2025-11-26 15:18:33,572 | INFO     | --------------------------------------------------
[2025-11-26 10:19:06] 2025-11-26 15:18:33,572 | INFO     | 
[2025-11-26 10:19:06] 2025-11-26 15:18:33,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 10:19:06] 2025-11-26 15:18:33,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:19:06] 2025-11-26 15:18:33,611 | INFO     | job 6896451221 has completed (purged errors)
[2025-11-26 10:19:06] 2025-11-26 15:18:33,611 | INFO     | overall cleanup function is called
[2025-11-26 10:19:06] 2025-11-26 15:18:34,648 | INFO     | --- collectZombieJob: --- 10, [1058446]
[2025-11-26 10:19:06] 2025-11-26 15:18:34,649 | INFO     | zombie collector waiting for pid 1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:34,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:19:06] 2025-11-26 15:18:34,649 | INFO     | collected zombie processes
[2025-11-26 10:19:06] 2025-11-26 15:18:34,649 | INFO     | will attempt to kill all subprocesses of pid=1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:35,116 | INFO     | process IDs to be killed: [1058446] (in reverse order)
[2025-11-26 10:19:06] 2025-11-26 15:18:35,254 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:19:06] 2025-11-26 15:18:35,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:19:06] 2025-11-26 15:18:35,273 | INFO     | did not find any defunct processes belonging to 1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:35,289 | INFO     | did not find any defunct processes belonging to 1058446
[2025-11-26 10:19:06] 2025-11-26 15:18:35,291 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:19:06] 2025-11-26 15:18:35,291 | INFO     | ready for new job
[2025-11-26 10:19:06] 2025-11-26 15:18:35,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:19:06] 2025-11-26 15:18:35,296 | INFO     | ***************************************
[2025-11-26 10:19:06] 2025-11-26 15:18:35,296 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:19:06] 2025-11-26 15:18:35,296 | INFO     | ***************************************
[2025-11-26 10:19:06] 2025-11-26 15:18:35,296 | INFO     | 
[2025-11-26 10:19:06] 2025-11-26 15:18:35,298 | INFO     | architecture information:
[2025-11-26 10:19:06] 2025-11-26 15:18:35,299 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:19:06] 2025-11-26 15:18:35,312 | INFO     | cat /etc/os-release:
[2025-11-26 10:19:06] NAME="CentOS Linux"
[2025-11-26 10:19:06] VERSION="7 (Core)"
[2025-11-26 10:19:06] ID="centos"
[2025-11-26 10:19:06] ID_LIKE="rhel fedora"
[2025-11-26 10:19:06] VERSION_ID="7"
[2025-11-26 10:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:19:06] ANSI_COLOR="0;31"
[2025-11-26 10:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:19:06] HOME_URL="https://www.centos.org/"
[2025-11-26 10:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:19:06] 
[2025-11-26 10:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:19:06] 
[2025-11-26 10:19:06] 2025-11-26 15:18:35,312 | INFO     | ***************************************
[2025-11-26 10:19:06] 2025-11-26 15:18:35,818 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 10:19:06] 2025-11-26 15:18:35,850 | INFO     | sufficient remaining disk space (72311898112 B)
[2025-11-26 10:19:06] 2025-11-26 15:18:35,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:19:06] 2025-11-26 15:18:35,850 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:19:06] 2025-11-26 15:18:35,850 | INFO     | update_server=False
[2025-11-26 10:19:06] 2025-11-26 15:18:35,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:19:06] 2025-11-26 15:18:35,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:19:06] 2025-11-26 15:18:36,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 10:19:06] 2025-11-26 15:18:36,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 10:19:06] 2025-11-26 15:18:36,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:19:06] 2025-11-26 15:18:36,130 | INFO     | will abort loop
[2025-11-26 10:19:06] 2025-11-26 15:18:36,142 | INFO     | all payload control threads have been joined
[2025-11-26 10:19:06] 2025-11-26 15:18:36,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:19:06] 2025-11-26 15:18:36,433 | INFO     | all data control threads have been joined
[2025-11-26 10:19:06] 2025-11-26 15:18:36,856 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,134 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,147 | INFO     | [payload] control thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,438 | INFO     | [data] control thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,538 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,543 | INFO     | all job control threads have been joined
[2025-11-26 10:19:06] 2025-11-26 15:18:37,687 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,697 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,834 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:37,935 | INFO     | [job] validate thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,058 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,386 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,447 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,548 | INFO     | [job] control thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:38,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:19:06] 2025-11-26 15:18:39,589 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:39,862 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:19:06] 2025-11-26 15:18:51,746 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:19:06] 2025-11-26 15:18:51,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932818761536)>', '<ExcThread(monitor, started 139932106483456)>']
[2025-11-26 10:19:06] 2025-11-26 15:18:56,816 | INFO     | all workflow threads have been joined
[2025-11-26 10:19:06] 2025-11-26 15:18:56,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:19:06] 2025-11-26 15:18:56,817 | INFO     | traces error code: 0
[2025-11-26 10:19:06] 2025-11-26 15:18:56,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:19:06] 2025-11-26 15:19:06,364 | INFO     | PID=1049842 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:19:06] 2025-11-26 15:19:06,364 | INFO     | .. there are 43 such processes running
[2025-11-26 10:19:06] 2025-11-26 15:19:06,364 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:19:06] 2025-11-26 15:19:06,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:19:06] 2025-11-26 15:19:06,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:19:06] 2025-11-26 15:19:06,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:19:06] 2025-11-26 15:19:06,365 | INFO     | [monitor] control thread has ended
[2025-11-26 10:19:06] 2025-11-26 15:19:06,558 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:19:06] 2025-11-26 15:19:06,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:19:06] 2025-11-26 15:19:06,564 [wrapper] pilotpid: 1049842
[2025-11-26 10:19:06] 2025-11-26 15:19:06,567 [wrapper] Pilot exit status: 0
[2025-11-26 10:19:06] 2025-11-26 15:19:06,606 [wrapper] pandaids: 6896451221
[2025-11-26 10:19:06] 2025-11-26 15:19:06,683 [wrapper] cleanup supervisor_pilot 3975860 1049843
[2025-11-26 10:19:06] 2025-11-26 15:19:06,687 [wrapper] Test setup, not cleaning
[2025-11-26 10:19:06] 2025-11-26 15:19:06,690 [wrapper] apfmon messages muted
[2025-11-26 10:19:06] 2025-11-26 15:19:06,693 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:19:06] 2025-11-26 15:19:06,696 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:19:06]  *** Error codes and diagnostics ***
[2025-11-26 10:19:06]     "exeErrorCode": 0,
[2025-11-26 10:19:06]     "exeErrorDiag": "",
[2025-11-26 10:19:06]     "pilotErrorCode": 0,
[2025-11-26 10:19:06]     "pilotErrorDiag": "",
[2025-11-26 10:19:06]  *** Listing of results directory ***
[2025-11-26 10:19:06] total 1309288
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:21 queuedata.json
[2025-11-26 10:19:06] -rwx------. 1 boincer umatlas     36292 Nov 24 23:21 runpilot2-wrapper.sh
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:19:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:54 run_atlas
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:54 job.xml
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas 407448271 Nov 25 19:54 EVNT.47483658._002081.pool.root.1
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:54 start_atlas.sh
[2025-11-26 10:19:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:54 shared
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:54 input.tar.gz
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:54 boinc_lockfile
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 19:54 pandaJob.out
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas        57 Nov 25 19:54 setup.sh.local
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas    991877 Nov 25 19:55 agis_schedconf.cvmfs.json
[2025-11-26 10:19:06] drwx------. 5 boincer umatlas      4096 Nov 25 19:55 pilot3
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:06 boinc_task_state.xml
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas 911692861 Nov 26 10:17 HITS.47556161._000641.pool.root.1
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas        95 Nov 26 10:18 pilot_heartbeat.json
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas      1058 Nov 26 10:18 memory_monitor_summary.json
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas   2144871 Nov 26 10:18 log.47556161._000641.job.log.tgz.1
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas      8616 Nov 26 10:18 heartbeat.json
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas      6657 Nov 26 10:18 init_data.xml
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas        29 Nov 26 10:19 wrapper_checkpoint.txt
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas       823 Nov 26 10:19 pilotlog.txt
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:19 boinc_mmap_file
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas   6682881 Nov 26 10:19 log.47556161._000641.job.log.1
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas       353 Nov 26 10:19 output.list
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:19 runtime_log
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas   8847360 Nov 26 10:19 result.tar.gz
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 10:19 runtime_log.err
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas       657 Nov 26 10:19 MTOODmnjzh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuJJKDmJqCeLo.diag
[2025-11-26 10:19:06] -rw-r--r--. 1 boincer umatlas     21173 Nov 26 10:19 stderr.txt
[2025-11-26 10:19:06] HITS file was successfully produced:
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas 911692861 Nov 26 10:17 shared/HITS.pool.root.1
[2025-11-26 10:19:06]  *** Contents of shared directory: ***
[2025-11-26 10:19:06] total 1297468
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas 407448271 Nov 25 19:54 ATLAS.root_0
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:54 start_atlas.sh
[2025-11-26 10:19:06] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 19:54 input.tar.gz
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas 911692861 Nov 26 10:17 HITS.pool.root.1
[2025-11-26 10:19:06] -rw-------. 1 boincer umatlas   8847360 Nov 26 10:19 result.tar.gz
10:19:28 (1040839): run_atlas exited; CPU time 297339.023908
10:19:28 (1040839): called boinc_finish(0)

</stderr_txt>
]]>

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