Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:43:15 (2658456): wrapper (7.7.26015): starting
19:43:15 (2658456): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:43:15] Arguments: --nthreads 9
[2025-11-25 19:43:15] Threads: 9
[2025-11-25 19:43:15] Checking for CVMFS
[2025-11-25 19:43:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:43:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:43:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:43:17] 2.13.3.0 11830 29210 360348 153303 1 351 21937563 32935937 38966 16776704 0 159197057 99.555 174182877 33015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:43:17] CVMFS is ok
[2025-11-25 19:43:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:43:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:43:17] Further information can be found at the LHC@home message board.
[2025-11-25 19:43:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:43:17] Checking for apptainer binary...
[2025-11-25 19:43:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:43:17] Running /usr/bin/apptainer --version
[2025-11-25 19:43:17] apptainer version 1.4.4-1.el9
[2025-11-25 19:43:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:43:17] c6-8-25-1.aglt2.org
[2025-11-25 19:43:17] apptainer works
[2025-11-25 19:43:17] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:43:17] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:43:17] Starting ATLAS job with PandaID=6896450421
[2025-11-25 19:43:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:19:54]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:19:54] 2025-11-27 02:18:59,117 | INFO     | sum of square deviations: 1063365465070.5519
[2025-11-26 21:19:54] 2025-11-27 02:18:59,286 | INFO     | sum of deviations: 4543673323312.846
[2025-11-26 21:19:54] 2025-11-27 02:18:59,286 | INFO     | mean x: 1764163873.8322282
[2025-11-26 21:19:54] 2025-11-27 02:18:59,286 | INFO     | mean y: 3063654.8017241377
[2025-11-26 21:19:54] 2025-11-27 02:18:59,286 | INFO     | intersect: -7535063729.23168
[2025-11-26 21:19:54] 2025-11-27 02:18:59,288 | INFO     | chi2: 12.665062871073273
[2025-11-26 21:19:54] 2025-11-27 02:18:59,295 | INFO     | sum of square deviations: 1052825250576.4005
[2025-11-26 21:19:54] 2025-11-27 02:18:59,397 | INFO     | sum of deviations: 5095784146471.07
[2025-11-26 21:19:54] 2025-11-27 02:18:59,401 | INFO     | mean x: 1764163721.34664
[2025-11-26 21:19:54] 2025-11-27 02:18:59,401 | INFO     | mean y: 3071641.2129075183
[2025-11-26 21:19:54] 2025-11-27 02:18:59,402 | INFO     | intersect: -8535664980.174054
[2025-11-26 21:19:54] 2025-11-27 02:18:59,404 | INFO     | chi2: 9.314311379677955
[2025-11-26 21:19:54] 2025-11-27 02:18:59,404 | INFO     | current chi2=9.314311379677955 (change=26.456651068415628 %)
[2025-11-26 21:19:54] 2025-11-27 02:18:59,409 | INFO     | sum of square deviations: 1042354944369.1207
[2025-11-26 21:19:54] 2025-11-27 02:18:59,609 | INFO     | sum of deviations: 5661755399105.254
[2025-11-26 21:19:54] 2025-11-27 02:18:59,609 | INFO     | mean x: 1764163568.861148
[2025-11-26 21:19:54] 2025-11-27 02:18:59,610 | INFO     | mean y: 3079884.030040053
[2025-11-26 21:19:54] 2025-11-27 02:18:59,610 | INFO     | intersect: -9579320683.897171
[2025-11-26 21:19:54] 2025-11-27 02:18:59,611 | INFO     | chi2: 5.878274260116248
[2025-11-26 21:19:54] 2025-11-27 02:18:59,612 | INFO     | current chi2=5.878274260116248 (change=36.88986742550268 %)
[2025-11-26 21:19:54] 2025-11-27 02:18:59,695 | INFO     | sum of square deviations: 1031953766024.6863
[2025-11-26 21:19:54] 2025-11-27 02:19:00,219 | INFO     | time since job start (92106s) is within the limit (172800.0s)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,220 | INFO     | sum of deviations: 6071036684893.673
[2025-11-26 21:19:54] 2025-11-27 02:19:00,220 | INFO     | mean x: 1764163416.3717349
[2025-11-26 21:19:54] 2025-11-27 02:19:00,220 | INFO     | mean y: 3085880.3429336906
[2025-11-26 21:19:54] 2025-11-27 02:19:00,220 | INFO     | intersect: -10375577555.518728
[2025-11-26 21:19:54] 2025-11-27 02:19:00,222 | INFO     | chi2: 3.7284643504971537
[2025-11-26 21:19:54] 2025-11-27 02:19:00,222 | INFO     | current chi2=3.7284643504971537 (change=36.572126690403515 %)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,247 | INFO     | sum of square deviations: 1021621484550.9823
[2025-11-26 21:19:54] 2025-11-27 02:19:00,550 | INFO     | sum of deviations: 6228644486818.498
[2025-11-26 21:19:54] 2025-11-27 02:19:00,550 | INFO     | mean x: 1764163263.8783603
[2025-11-26 21:19:54] 2025-11-27 02:19:00,550 | INFO     | mean y: 3088206.124327957
[2025-11-26 21:19:54] 2025-11-27 02:19:00,550 | INFO     | intersect: -10752701441.577938
[2025-11-26 21:19:54] 2025-11-27 02:19:00,552 | INFO     | chi2: 3.3196046986177024
[2025-11-26 21:19:54] 2025-11-27 02:19:00,552 | INFO     | current chi2=3.3196046986177024 (change=10.965899454689275 %)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,552 | INFO     | right removable region: 1487
[2025-11-26 21:19:54] 2025-11-27 02:19:00,577 | INFO     | sum of square deviations: 1052821265446.4008
[2025-11-26 21:19:54] 2025-11-27 02:19:00,757 | INFO     | sum of deviations: 4018228286406.152
[2025-11-26 21:19:54] 2025-11-27 02:19:00,757 | INFO     | mean x: 1764164026.34664
[2025-11-26 21:19:54] 2025-11-27 02:19:00,757 | INFO     | mean y: 3071252.3087159013
[2025-11-26 21:19:54] 2025-11-27 02:19:00,757 | INFO     | intersect: -6730088520.561705
[2025-11-26 21:19:54] 2025-11-27 02:19:00,759 | INFO     | chi2: 9.941049355999649
[2025-11-26 21:19:54] 2025-11-27 02:19:00,760 | INFO     | current chi2=9.941049355999649 (change=21.508093112551467 %)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,760 | INFO     | left removable region: 10
[2025-11-26 21:19:54] 2025-11-27 02:19:00,762 | INFO     | sum of square deviations: 999128567727.3087
[2025-11-26 21:19:54] 2025-11-27 02:19:00,906 | INFO     | sum of deviations: 5505261212910.009
[2025-11-26 21:19:54] 2025-11-27 02:19:00,906 | INFO     | mean x: 1764163538.4028437
[2025-11-26 21:19:54] 2025-11-27 02:19:00,906 | INFO     | mean y: 3098905.1428571427
[2025-11-26 21:19:54] 2025-11-27 02:19:00,907 | INFO     | intersect: -9717553085.913002
[2025-11-26 21:19:54] 2025-11-27 02:19:00,913 | INFO     | chi2: 0.19944704889610615
[2025-11-26 21:19:54] 2025-11-27 02:19:00,913 | INFO     | current memory leak: 5.51 B/s (using 1477 data points, chi2=0.20)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,915 | INFO     | could have reported an average CPU frequency of 2636 MHz (53 samples)
[2025-11-26 21:19:54] 2025-11-27 02:19:00,915 | INFO     | ..............................
[2025-11-26 21:19:54] 2025-11-27 02:19:00,915 | INFO     | . Timing measurements:
[2025-11-26 21:19:54] 2025-11-27 02:19:00,915 | INFO     | . get job = 0 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,915 | INFO     | . initial setup = 4 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | . payload setup = 16 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | . stage-in = 0 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | . payload execution = 91985 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | . stage-out = 12 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | . log creation = 4 s
[2025-11-26 21:19:54] 2025-11-27 02:19:00,916 | INFO     | ..............................
[2025-11-26 21:19:54] 2025-11-27 02:19:01,372 | INFO     | 
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | job summary report
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | --------------------------------------------------
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | PanDA job id: 6896450421
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | task id: 47556149
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | errors: (none)
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | pilot state: finished 
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | transexitcode: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:01,373 | INFO     | exeerrorcode: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | exeerrordiag: 
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | exitcode: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | exitmsg: OK
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | cpuconsumptiontime: 263523 s
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | nevents: 1000
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | neventsw: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | pid: 2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | pgrp: 2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | corecount: 9
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | event service: False
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 18: 2284633, 23: 2284661, 92007: 2350161, 92008: 2350288, 92023: 2359338, 92029: 2359394, 92067: 2359736}
[2025-11-26 21:19:54] 2025-11-27 02:19:01,374 | INFO     | --------------------------------------------------
[2025-11-26 21:19:54] 2025-11-27 02:19:01,375 | INFO     | 
[2025-11-26 21:19:54] 2025-11-27 02:19:01,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 21:19:54] 2025-11-27 02:19:01,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,456 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,456 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:19:54] 2025-11-27 02:19:01,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:19:54] 2025-11-27 02:19:01,476 | INFO     | job 6896450421 has completed (purged errors)
[2025-11-26 21:19:54] 2025-11-27 02:19:01,476 | INFO     | overall cleanup function is called
[2025-11-26 21:19:54] 2025-11-27 02:19:02,493 | INFO     | --- collectZombieJob: --- 10, [2671925]
[2025-11-26 21:19:54] 2025-11-27 02:19:02,494 | INFO     | zombie collector waiting for pid 2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:02,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:19:54] 2025-11-27 02:19:02,494 | INFO     | collected zombie processes
[2025-11-26 21:19:54] 2025-11-27 02:19:02,494 | INFO     | will attempt to kill all subprocesses of pid=2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:04,569 | INFO     | process IDs to be killed: [2671925] (in reverse order)
[2025-11-26 21:19:54] 2025-11-27 02:19:04,967 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:19:54] 2025-11-27 02:19:04,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:19:54] 2025-11-27 02:19:04,995 | INFO     | did not find any defunct processes belonging to 2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:05,045 | INFO     | did not find any defunct processes belonging to 2671925
[2025-11-26 21:19:54] 2025-11-27 02:19:05,057 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:19:54] 2025-11-27 02:19:05,058 | INFO     | ready for new job
[2025-11-26 21:19:54] 2025-11-27 02:19:05,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:19:54] 2025-11-27 02:19:05,064 | INFO     | ***************************************
[2025-11-26 21:19:54] 2025-11-27 02:19:05,068 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:19:54] 2025-11-27 02:19:05,069 | INFO     | ***************************************
[2025-11-26 21:19:54] 2025-11-27 02:19:05,069 | INFO     | 
[2025-11-26 21:19:54] 2025-11-27 02:19:05,074 | INFO     | architecture information:
[2025-11-26 21:19:54] 2025-11-27 02:19:05,075 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:19:54] 2025-11-27 02:19:05,146 | INFO     | cat /etc/os-release:
[2025-11-26 21:19:54] NAME="CentOS Linux"
[2025-11-26 21:19:54] VERSION="7 (Core)"
[2025-11-26 21:19:54] ID="centos"
[2025-11-26 21:19:54] ID_LIKE="rhel fedora"
[2025-11-26 21:19:54] VERSION_ID="7"
[2025-11-26 21:19:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:19:54] ANSI_COLOR="0;31"
[2025-11-26 21:19:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:19:54] HOME_URL="https://www.centos.org/"
[2025-11-26 21:19:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:19:54] 
[2025-11-26 21:19:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:19:54] 
[2025-11-26 21:19:54] 2025-11-27 02:19:05,146 | INFO     | ***************************************
[2025-11-26 21:19:54] 2025-11-27 02:19:05,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 21:19:54] 2025-11-27 02:19:05,778 | INFO     | sufficient remaining disk space (67679289344 B)
[2025-11-26 21:19:54] 2025-11-27 02:19:05,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:19:54] 2025-11-27 02:19:05,778 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:19:54] 2025-11-27 02:19:05,778 | INFO     | update_server=False
[2025-11-26 21:19:54] 2025-11-27 02:19:05,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:19:54] 2025-11-27 02:19:05,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:19:54] 2025-11-27 02:19:06,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:19:54] 2025-11-27 02:19:06,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:19:54] 2025-11-27 02:19:06,272 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 21:19:54] 2025-11-27 02:19:06,273 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 21:19:54] 2025-11-27 02:19:06,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:19:54] 2025-11-27 02:19:06,273 | INFO     | will abort loop
[2025-11-26 21:19:54] 2025-11-27 02:19:06,353 | INFO     | all data control threads have been joined
[2025-11-26 21:19:54] 2025-11-27 02:19:06,786 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:06,833 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:06,840 | INFO     | [job] validate thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:06,859 | INFO     | all payload control threads have been joined
[2025-11-26 21:19:54] 2025-11-27 02:19:06,945 | INFO     | all job control threads have been joined
[2025-11-26 21:19:54] 2025-11-27 02:19:07,130 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,183 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,281 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,359 | INFO     | [data] control thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,830 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,864 | INFO     | [payload] control thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,941 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,946 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:07,960 | INFO     | [job] control thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:08,244 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:08,286 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:09,811 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:19:54] 2025-11-27 02:19:35,032 | INFO     | PID=2663066 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:19:54] 2025-11-27 02:19:35,036 | INFO     | .. there are 51 such processes running
[2025-11-26 21:19:54] 2025-11-27 02:19:35,037 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:19:54] 2025-11-27 02:19:35,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:19:54] 2025-11-27 02:19:35,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:19:54] 2025-11-27 02:19:46,921 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:19:54] 2025-11-27 02:19:47,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515951339328)>', '<ExcThread(monitor, started 140514955360000)>']
[2025-11-26 21:19:54] 2025-11-27 02:19:47,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:19:54] 2025-11-27 02:19:47,171 | INFO     | [monitor] control thread has ended
[2025-11-26 21:19:54] 2025-11-27 02:19:52,049 | INFO     | all workflow threads have been joined
[2025-11-26 21:19:54] 2025-11-27 02:19:52,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:19:54] 2025-11-27 02:19:52,050 | INFO     | traces error code: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:52,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:19:54] 2025-11-27 02:19:53,123 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:19:54] 2025-11-27 02:19:53,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:19:54] 2025-11-27 02:19:53,157 [wrapper] pilotpid: 2663066
[2025-11-26 21:19:54] 2025-11-27 02:19:53,174 [wrapper] Pilot exit status: 0
[2025-11-26 21:19:54] 2025-11-27 02:19:53,225 [wrapper] pandaids: 6896450421
[2025-11-26 21:19:54] 2025-11-27 02:19:53,664 [wrapper] cleanup supervisor_pilot 2584670 2663067
[2025-11-26 21:19:54] 2025-11-27 02:19:53,697 [wrapper] Test setup, not cleaning
[2025-11-26 21:19:54] 2025-11-27 02:19:53,716 [wrapper] apfmon messages muted
[2025-11-26 21:19:54] 2025-11-27 02:19:53,746 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:19:54] 2025-11-27 02:19:53,768 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:19:54]  *** Error codes and diagnostics ***
[2025-11-26 21:19:54]     "exeErrorCode": 0,
[2025-11-26 21:19:54]     "exeErrorDiag": "",
[2025-11-26 21:19:54]     "pilotErrorCode": 0,
[2025-11-26 21:19:54]     "pilotErrorDiag": "",
[2025-11-26 21:19:54]  *** Listing of results directory ***
[2025-11-26 21:19:54] total 1336716
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:36 queuedata.json
[2025-11-26 21:19:54] -rwx------. 1 boincer umatlas     36292 Nov 24 22:41 runpilot2-wrapper.sh
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:19:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:43 run_atlas
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:43 job.xml
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas 409405028 Nov 25 19:43 EVNT.47483658._001496.pool.root.1
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:43 start_atlas.sh
[2025-11-26 21:19:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:43 shared
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 19:43 input.tar.gz
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:43 boinc_lockfile
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 19:43 pandaJob.out
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas        57 Nov 25 19:43 setup.sh.local
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas    991877 Nov 25 19:43 agis_schedconf.cvmfs.json
[2025-11-26 21:19:54] drwx------. 5 boincer umatlas      4096 Nov 25 19:43 pilot3
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:54 boinc_task_state.xml
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas      6877 Nov 26 21:12 init_data.xml
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas 928981033 Nov 26 21:16 HITS.47556149._004829.pool.root.1
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas      1059 Nov 26 21:17 memory_monitor_summary.json
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas   2558363 Nov 26 21:18 log.47556149._004829.job.log.tgz.1
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas        95 Nov 26 21:18 pilot_heartbeat.json
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas      8622 Nov 26 21:19 heartbeat.json
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:19 boinc_mmap_file
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:19 wrapper_checkpoint.txt
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas      5010 Nov 26 21:19 pilotlog.txt
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas  10686226 Nov 26 21:19 log.47556149._004829.job.log.1
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas       353 Nov 26 21:19 output.list
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:19 runtime_log
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas  13260800 Nov 26 21:19 result.tar.gz
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 21:19 runtime_log.err
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas       661 Nov 26 21:19 EBuMDm66yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg5LKDmJxMwLm.diag
[2025-11-26 21:19:54] -rw-r--r--. 1 boincer umatlas     21226 Nov 26 21:19 stderr.txt
[2025-11-26 21:19:54] HITS file was successfully produced:
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas 928981033 Nov 26 21:16 shared/HITS.pool.root.1
[2025-11-26 21:19:54]  *** Contents of shared directory: ***
[2025-11-26 21:19:54] total 1320580
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas 409405028 Nov 25 19:43 ATLAS.root_0
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:43 start_atlas.sh
[2025-11-26 21:19:54] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 19:43 input.tar.gz
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas 928981033 Nov 26 21:16 HITS.pool.root.1
[2025-11-26 21:19:54] -rw-------. 1 boincer umatlas  13260800 Nov 26 21:19 result.tar.gz
21:19:55 (2658456): run_atlas exited; CPU time 266977.011556
21:19:55 (2658456): called boinc_finish(0)

</stderr_txt>
]]>

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