Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:08 (269651): wrapper (7.7.26015): starting
21:27:08 (269651): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 21:27:08] Arguments: --nthreads 10
[2025-11-25 21:27:08] Threads: 10
[2025-11-25 21:27:08] Checking for CVMFS
[2025-11-25 21:27:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:27:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:27:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:27:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:27:09] 2.13.3.0 12348 29450 371740 153305 2 203 28205736 32935936 34263 16776704 0 146178899 99.488 188001053 35503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:27:09] CVMFS is ok
[2025-11-25 21:27:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:27:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:27:09] Further information can be found at the LHC@home message board.
[2025-11-25 21:27:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:27:09] Checking for apptainer binary...
[2025-11-25 21:27:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:27:09] Running /usr/bin/apptainer --version
[2025-11-25 21:27:09] apptainer version 1.4.4-1.el9
[2025-11-25 21:27:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:27:09] c6-12-27-2.aglt2.org
[2025-11-25 21:27:09] apptainer works
[2025-11-25 21:27:09] Set ATHENA_PROC_NUMBER=10
[2025-11-25 21:27:09] Set ATHENA_CORE_NUMBER=10
[2025-11-25 21:27:09] Starting ATLAS job with PandaID=6896450867
[2025-11-25 21:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:57:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:57:05] 2025-11-27 08:56:05,851 | INFO     | sum of square deviations: 1802356546718.518
[2025-11-27 03:57:05] 2025-11-27 08:56:06,001 | INFO     | sum of deviations: 6997535137933.368
[2025-11-27 03:57:05] 2025-11-27 08:56:06,002 | INFO     | mean x: 1764178898.7992213
[2025-11-27 03:57:05] 2025-11-27 08:56:06,002 | INFO     | mean y: 3311625.9760845383
[2025-11-27 03:57:05] 2025-11-27 08:56:06,002 | INFO     | intersect: -6846001211.943828
[2025-11-27 03:57:05] 2025-11-27 08:56:06,004 | INFO     | chi2: 12.657619100201538
[2025-11-27 03:57:05] 2025-11-27 08:56:06,007 | INFO     | sum of square deviations: 1787363443930.0588
[2025-11-27 03:57:05] 2025-11-27 08:56:06,031 | INFO     | time since job start (109717s) is within the limit (172800.0s)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,128 | INFO     | sum of deviations: 7696612475364.7295
[2025-11-27 03:57:05] 2025-11-27 08:56:06,128 | INFO     | mean x: 1764178746.307864
[2025-11-27 03:57:05] 2025-11-27 08:56:06,128 | INFO     | mean y: 3318735.3301728945
[2025-11-27 03:57:05] 2025-11-27 08:56:06,128 | INFO     | intersect: -7593457507.195319
[2025-11-27 03:57:05] 2025-11-27 08:56:06,130 | INFO     | chi2: 9.411067972689237
[2025-11-27 03:57:05] 2025-11-27 08:56:06,131 | INFO     | current chi2=9.411067972689237 (change=25.648987394956517 %)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,133 | INFO     | sum of square deviations: 1772453738541.8296
[2025-11-27 03:57:05] 2025-11-27 08:56:06,194 | INFO     | sum of deviations: 8470692012787.066
[2025-11-27 03:57:05] 2025-11-27 08:56:06,194 | INFO     | mean x: 1764178593.8165548
[2025-11-27 03:57:05] 2025-11-27 08:56:06,194 | INFO     | mean y: 3326652.2684563757
[2025-11-27 03:57:05] 2025-11-27 08:56:06,194 | INFO     | intersect: -8427817810.811214
[2025-11-27 03:57:05] 2025-11-27 08:56:06,197 | INFO     | chi2: 5.58007895544391
[2025-11-27 03:57:05] 2025-11-27 08:56:06,197 | INFO     | current chi2=5.58007895544391 (change=40.707271782148354 %)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,199 | INFO     | sum of square deviations: 1757626979620.63
[2025-11-27 03:57:05] 2025-11-27 08:56:06,317 | INFO     | sum of deviations: 9023161431363.56
[2025-11-27 03:57:05] 2025-11-27 08:56:06,317 | INFO     | mean x: 1764178441.3241727
[2025-11-27 03:57:05] 2025-11-27 08:56:06,318 | INFO     | mean y: 3332331.0959057766
[2025-11-27 03:57:05] 2025-11-27 08:56:06,318 | INFO     | intersect: -9053462457.770634
[2025-11-27 03:57:05] 2025-11-27 08:56:06,325 | INFO     | chi2: 3.2541960053348853
[2025-11-27 03:57:05] 2025-11-27 08:56:06,325 | INFO     | current chi2=3.2541960053348853 (change=41.68190035805676 %)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,328 | INFO     | sum of square deviations: 1742881847826.6025
[2025-11-27 03:57:05] 2025-11-27 08:56:06,452 | INFO     | sum of deviations: 9133929328922.27
[2025-11-27 03:57:05] 2025-11-27 08:56:06,452 | INFO     | mean x: 1764178288.8250844
[2025-11-27 03:57:05] 2025-11-27 08:56:06,452 | INFO     | mean y: 3333475.984814398
[2025-11-27 03:57:05] 2025-11-27 08:56:06,452 | INFO     | intersect: -9242204214.273174
[2025-11-27 03:57:05] 2025-11-27 08:56:06,463 | INFO     | chi2: 3.060792364939367
[2025-11-27 03:57:05] 2025-11-27 08:56:06,463 | INFO     | current chi2=3.060792364939367 (change=5.9432080943635555 %)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,463 | INFO     | right removable region: 1777
[2025-11-27 03:57:05] 2025-11-27 08:56:06,466 | INFO     | sum of square deviations: 1787360044766.0586
[2025-11-27 03:57:05] 2025-11-27 08:56:06,539 | INFO     | monitor loop #5562: job 0:6896450867 is in state 'finished'
[2025-11-27 03:57:05] 2025-11-27 08:56:06,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,923 | INFO     | sum of deviations: 6381794802209.752
[2025-11-27 03:57:05] 2025-11-27 08:56:06,924 | INFO     | mean x: 1764179051.307864
[2025-11-27 03:57:05] 2025-11-27 08:56:06,924 | INFO     | mean y: 3317884.0167317344
[2025-11-27 03:57:05] 2025-11-27 08:56:06,924 | INFO     | intersect: -6295708846.927934
[2025-11-27 03:57:05] 2025-11-27 08:56:06,926 | INFO     | chi2: 10.154181642934859
[2025-11-27 03:57:05] 2025-11-27 08:56:06,927 | INFO     | current chi2=10.154181642934859 (change=19.77810706301645 %)
[2025-11-27 03:57:05] 2025-11-27 08:56:06,927 | INFO     | left removable region: 10
[2025-11-27 03:57:05] 2025-11-27 08:56:06,929 | INFO     | sum of square deviations: 1710730129245.2239
[2025-11-27 03:57:05] 2025-11-27 08:56:07,026 | INFO     | sum of deviations: 8348560470745.162
[2025-11-27 03:57:05] 2025-11-27 08:56:07,027 | INFO     | mean x: 1764178563.3412564
[2025-11-27 03:57:05] 2025-11-27 08:56:07,027 | INFO     | mean y: 3341683.870401811
[2025-11-27 03:57:05] 2025-11-27 08:56:07,027 | INFO     | intersect: -8606053313.892904
[2025-11-27 03:57:05] 2025-11-27 08:56:07,029 | INFO     | chi2: 0.4357151200967139
[2025-11-27 03:57:05] 2025-11-27 08:56:07,030 | INFO     | current memory leak: 4.88 B/s (using 1767 data points, chi2=0.44)
[2025-11-27 03:57:05] 2025-11-27 08:56:07,032 | INFO     | could have reported an average CPU frequency of 2695 MHz (63 samples)
[2025-11-27 03:57:05] 2025-11-27 08:56:07,033 | INFO     | ..............................
[2025-11-27 03:57:05] 2025-11-27 08:56:07,033 | INFO     | . Timing measurements:
[2025-11-27 03:57:05] 2025-11-27 08:56:07,033 | INFO     | . get job = 0 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,033 | INFO     | . initial setup = 3 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,033 | INFO     | . payload setup = 10 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,034 | INFO     | . stage-in = 0 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,034 | INFO     | . payload execution = 109648 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,034 | INFO     | . stage-out = 8 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,035 | INFO     | . log creation = 2 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,035 | INFO     | ..............................
[2025-11-27 03:57:05] 2025-11-27 08:56:07,214 | INFO     | 
[2025-11-27 03:57:05] 2025-11-27 08:56:07,214 | INFO     | job summary report
[2025-11-27 03:57:05] 2025-11-27 08:56:07,214 | INFO     | --------------------------------------------------
[2025-11-27 03:57:05] 2025-11-27 08:56:07,214 | INFO     | PanDA job id: 6896450867
[2025-11-27 03:57:05] 2025-11-27 08:56:07,214 | INFO     | task id: 47556149
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | errors: (none)
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | pilot state: finished 
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | transexitcode: 0
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | exeerrorcode: 0
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | exeerrordiag: 
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | exitcode: 0
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | exitmsg: OK
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | cpuconsumptiontime: 276040 s
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | nevents: 1000
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | neventsw: 0
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | pid: 281541
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | pgrp: 281541
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | corecount: 10
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | event service: False
[2025-11-27 03:57:05] 2025-11-27 08:56:07,215 | INFO     | sizes: {0: 2284315, 8: 2284577, 11: 2284605, 109661: 2358586, 109669: 2367580, 109670: 2367636, 109699: 2368010}
[2025-11-27 03:57:05] 2025-11-27 08:56:07,216 | INFO     | --------------------------------------------------
[2025-11-27 03:57:05] 2025-11-27 08:56:07,216 | INFO     | 
[2025-11-27 03:57:05] 2025-11-27 08:56:07,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:57:05] 2025-11-27 08:56:07,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:57:05] 2025-11-27 08:56:07,268 | INFO     | job 6896450867 has completed (purged errors)
[2025-11-27 03:57:05] 2025-11-27 08:56:07,268 | INFO     | overall cleanup function is called
[2025-11-27 03:57:05] 2025-11-27 08:56:08,288 | INFO     | --- collectZombieJob: --- 10, [281541]
[2025-11-27 03:57:05] 2025-11-27 08:56:08,288 | INFO     | zombie collector waiting for pid 281541
[2025-11-27 03:57:05] 2025-11-27 08:56:08,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:57:05] 2025-11-27 08:56:08,288 | INFO     | collected zombie processes
[2025-11-27 03:57:05] 2025-11-27 08:56:08,288 | INFO     | will attempt to kill all subprocesses of pid=281541
[2025-11-27 03:57:05] 2025-11-27 08:56:11,168 | INFO     | process IDs to be killed: [281541] (in reverse order)
[2025-11-27 03:57:05] 2025-11-27 08:56:11,544 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:57:05] 2025-11-27 08:56:11,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:57:05] 2025-11-27 08:56:11,633 | INFO     | did not find any defunct processes belonging to 281541
[2025-11-27 03:57:05] 2025-11-27 08:56:11,734 | INFO     | did not find any defunct processes belonging to 281541
[2025-11-27 03:57:05] 2025-11-27 08:56:11,755 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:57:05] 2025-11-27 08:56:11,755 | INFO     | ready for new job
[2025-11-27 03:57:05] 2025-11-27 08:56:11,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:57:05] 2025-11-27 08:56:11,786 | INFO     | ***************************************
[2025-11-27 03:57:05] 2025-11-27 08:56:11,786 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:57:05] 2025-11-27 08:56:11,786 | INFO     | ***************************************
[2025-11-27 03:57:05] 2025-11-27 08:56:11,786 | INFO     | 
[2025-11-27 03:57:05] 2025-11-27 08:56:11,804 | INFO     | architecture information:
[2025-11-27 03:57:05] 2025-11-27 08:56:11,827 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:57:05] 2025-11-27 08:56:11,929 | INFO     | cat /etc/os-release:
[2025-11-27 03:57:05] NAME="CentOS Linux"
[2025-11-27 03:57:05] VERSION="7 (Core)"
[2025-11-27 03:57:05] ID="centos"
[2025-11-27 03:57:05] ID_LIKE="rhel fedora"
[2025-11-27 03:57:05] VERSION_ID="7"
[2025-11-27 03:57:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:57:05] ANSI_COLOR="0;31"
[2025-11-27 03:57:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:57:05] HOME_URL="https://www.centos.org/"
[2025-11-27 03:57:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:57:05] 
[2025-11-27 03:57:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:57:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:57:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:57:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:57:05] 
[2025-11-27 03:57:05] 2025-11-27 08:56:11,930 | INFO     | ***************************************
[2025-11-27 03:57:05] 2025-11-27 08:56:12,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 03:57:05] 2025-11-27 08:56:12,533 | INFO     | sufficient remaining disk space (86772809728 B)
[2025-11-27 03:57:05] 2025-11-27 08:56:12,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:57:05] 2025-11-27 08:56:12,565 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:57:05] 2025-11-27 08:56:12,565 | INFO     | update_server=False
[2025-11-27 03:57:05] 2025-11-27 08:56:12,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:57:05] 2025-11-27 08:56:12,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:57:05] 2025-11-27 08:56:12,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:57:05] 2025-11-27 08:56:12,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:57:05] 2025-11-27 08:56:12,754 | INFO     | aborting loop
[2025-11-27 03:57:05] 2025-11-27 08:56:12,988 | INFO     | all job control threads have been joined
[2025-11-27 03:57:05] 2025-11-27 08:56:13,514 | INFO     | all data control threads have been joined
[2025-11-27 03:57:05] 2025-11-27 08:56:13,583 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:13,584 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:13,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:57:05] 2025-11-27 08:56:13,760 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:13,854 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,017 | INFO     | [job] control thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,046 | INFO     | all payload control threads have been joined
[2025-11-27 03:57:05] 2025-11-27 08:56:14,210 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,277 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,428 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,523 | INFO     | [data] control thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,606 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,731 | INFO     | [job] validate thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:14,745 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:15,057 | INFO     | [payload] control thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:15,603 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:16,604 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:57:05] 2025-11-27 08:56:41,398 | INFO     | PID=274562 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 03:57:05] 2025-11-27 08:56:41,398 | INFO     | .. there are 48 such processes running
[2025-11-27 03:57:05] 2025-11-27 08:56:41,405 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:57:05] 2025-11-27 08:56:41,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:57:05] 2025-11-27 08:56:41,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:57:05] 2025-11-27 08:56:57,077 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:57:05] 2025-11-27 08:56:57,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720088749888)>', '<ExcThread(monitor, started 140719595431680)>']
[2025-11-27 03:57:05] 2025-11-27 08:56:58,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:57:05] 2025-11-27 08:56:58,561 | INFO     | [monitor] control thread has ended
[2025-11-27 03:57:05] 2025-11-27 08:57:02,920 | INFO     | all workflow threads have been joined
[2025-11-27 03:57:05] 2025-11-27 08:57:02,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:57:05] 2025-11-27 08:57:02,921 | INFO     | traces error code: 0
[2025-11-27 03:57:05] 2025-11-27 08:57:02,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:57:05] 2025-11-27 08:57:03,545 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:57:05] 2025-11-27 08:57:03,596 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:57:05] 2025-11-27 08:57:03,648 [wrapper] pilotpid: 274562
[2025-11-27 03:57:05] 2025-11-27 08:57:03,666 [wrapper] Pilot exit status: 0
[2025-11-27 03:57:05] 2025-11-27 08:57:03,828 [wrapper] pandaids: 6896450867
[2025-11-27 03:57:05] 2025-11-27 08:57:04,564 [wrapper] cleanup supervisor_pilot 3962446 274563
[2025-11-27 03:57:05] 2025-11-27 08:57:04,571 [wrapper] Test setup, not cleaning
[2025-11-27 03:57:05] 2025-11-27 08:57:04,575 [wrapper] apfmon messages muted
[2025-11-27 03:57:05] 2025-11-27 08:57:04,578 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:57:05] 2025-11-27 08:57:04,584 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:57:05]  *** Error codes and diagnostics ***
[2025-11-27 03:57:05]     "exeErrorCode": 0,
[2025-11-27 03:57:05]     "exeErrorDiag": "",
[2025-11-27 03:57:05]     "pilotErrorCode": 0,
[2025-11-27 03:57:05]     "pilotErrorDiag": "",
[2025-11-27 03:57:05]  *** Listing of results directory ***
[2025-11-27 03:57:05] total 1337728
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:11 queuedata.json
[2025-11-27 03:57:05] -rwx------. 1 boincer umatlas     36292 Nov 24 23:13 runpilot2-wrapper.sh
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:57:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:27 run_atlas
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:27 job.xml
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas 409990242 Nov 25 21:27 EVNT.47483658._001503.pool.root.1
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:27 start_atlas.sh
[2025-11-27 03:57:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:27 shared
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 21:27 input.tar.gz
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:27 boinc_lockfile
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 21:27 pandaJob.out
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas        57 Nov 25 21:27 setup.sh.local
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas    991877 Nov 25 21:27 agis_schedconf.cvmfs.json
[2025-11-27 03:57:05] drwx------. 5 boincer umatlas      4096 Nov 25 21:27 pilot3
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:33 boinc_task_state.xml
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas 925378874 Nov 27 03:54 HITS.47556149._004893.pool.root.1
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas      1072 Nov 27 03:55 memory_monitor_summary.json
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas   2830375 Nov 27 03:55 log.47556149._004893.job.log.tgz.1
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas      8632 Nov 27 03:56 heartbeat.json
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas        95 Nov 27 03:56 pilot_heartbeat.json
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas      6881 Nov 27 03:57 init_data.xml
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas      4823 Nov 27 03:57 pilotlog.txt
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:57 boinc_mmap_file
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas  12438045 Nov 27 03:57 log.47556149._004893.job.log.1
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:57 wrapper_checkpoint.txt
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas       353 Nov 27 03:57 output.list
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:57 runtime_log
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas  15288320 Nov 27 03:57 result.tar.gz
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas       665 Nov 27 03:57 ygYNDmVbzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo6LKDmkaualm.diag
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas      9356 Nov 27 03:57 runtime_log.err
[2025-11-27 03:57:05] -rw-r--r--. 1 boincer umatlas     21208 Nov 27 03:57 stderr.txt
[2025-11-27 03:57:05] HITS file was successfully produced:
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas 925378874 Nov 27 03:54 shared/HITS.pool.root.1
[2025-11-27 03:57:05]  *** Contents of shared directory: ***
[2025-11-27 03:57:05] total 1319612
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas 409990242 Nov 25 21:27 ATLAS.root_0
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:27 start_atlas.sh
[2025-11-27 03:57:05] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 21:27 input.tar.gz
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas 925378874 Nov 27 03:54 HITS.pool.root.1
[2025-11-27 03:57:05] -rw-------. 1 boincer umatlas  15288320 Nov 27 03:57 result.tar.gz
03:57:06 (269651): run_atlas exited; CPU time 280285.971084
03:57:06 (269651): called boinc_finish(0)

</stderr_txt>
]]>

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