Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:49 (2959703): wrapper (7.7.26015): starting
19:02:49 (2959703): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 19:02:49] Arguments: --nthreads 10
[2025-11-25 19:02:49] Threads: 10
[2025-11-25 19:02:49] Checking for CVMFS
[2025-11-25 19:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:02:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:02:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:02:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:02:50] 2.13.3.0 17216 29169 492844 153302 3 844 25387122 32935937 63565 16776704 0 513313027 99.678 406414196 48382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:02:50] CVMFS is ok
[2025-11-25 19:02:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:02:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:02:50] Further information can be found at the LHC@home message board.
[2025-11-25 19:02:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:02:50] Checking for apptainer binary...
[2025-11-25 19:02:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:02:50] Running /usr/bin/apptainer --version
[2025-11-25 19:02:50] apptainer version 1.4.4-1.el9
[2025-11-25 19:02:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:02:50] c7-9-14.aglt2.org
[2025-11-25 19:02:50] apptainer works
[2025-11-25 19:02:50] Set ATHENA_PROC_NUMBER=10
[2025-11-25 19:02:50] Set ATHENA_CORE_NUMBER=10
[2025-11-25 19:02:50] Starting ATLAS job with PandaID=6895674860
[2025-11-25 19:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:10:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:10:52] 2025-11-26 05:09:46,639 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:10:52] 2025-11-26 05:09:46,639 | INFO     | sum of square deviations: 8455863612.438532
[2025-11-26 00:10:52] 2025-11-26 05:09:46,640 | INFO     | sum of deviations: 46512370768.79408
[2025-11-26 00:10:52] 2025-11-26 05:09:46,641 | INFO     | mean x: 1764124588.9568107
[2025-11-26 00:10:52] 2025-11-26 05:09:46,641 | INFO     | mean y: 3131027.368770764
[2025-11-26 00:10:52] 2025-11-26 05:09:46,641 | INFO     | intersect: -9700622571.873913
[2025-11-26 00:10:52] 2025-11-26 05:09:46,641 | INFO     | chi2: 7.8248698779524855
[2025-11-26 00:10:52] 2025-11-26 05:09:46,661 | INFO     | sum of square deviations: 8041506467.783797
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | sum of deviations: 166450929670.40515
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | mean x: 1764124436.4729729
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | mean y: 3175159.6756756757
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | intersect: -36512389887.94305
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | chi2: 3.958023761868125
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | current chi2=3.958023761868125 (change=49.41738554630366 %)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,663 | INFO     | sum of square deviations: 7640899089.944984
[2025-11-26 00:10:52] 2025-11-26 05:09:46,664 | INFO     | sum of deviations: 238801875832.5088
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | mean x: 1764124283.9862542
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | mean y: 3202601.1271477663
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | intersect: -55131171411.47772
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | chi2: 2.2787935457273205
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | current chi2=2.2787935457273205 (change=42.42597612269599 %)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,665 | INFO     | sum of square deviations: 7253773233.468534
[2025-11-26 00:10:52] 2025-11-26 05:09:46,670 | INFO     | sum of deviations: 241129324158.27942
[2025-11-26 00:10:52] 2025-11-26 05:09:46,670 | INFO     | mean x: 1764124131.4895105
[2025-11-26 00:10:52] 2025-11-26 05:09:46,670 | INFO     | mean y: 3203474.4265734265
[2025-11-26 00:10:52] 2025-11-26 05:09:46,670 | INFO     | intersect: -58639663605.38322
[2025-11-26 00:10:52] 2025-11-26 05:09:46,671 | INFO     | chi2: 2.208352420221389
[2025-11-26 00:10:52] 2025-11-26 05:09:46,671 | INFO     | current chi2=2.208352420221389 (change=3.0911587246684515 %)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,671 | INFO     | right removable region: 285
[2025-11-26 00:10:52] 2025-11-26 05:09:46,671 | INFO     | sum of square deviations: 8041330787.783797
[2025-11-26 00:10:52] 2025-11-26 05:09:46,672 | INFO     | sum of deviations: -32977115240.162113
[2025-11-26 00:10:52] 2025-11-26 05:09:46,672 | INFO     | mean x: 1764124741.4729729
[2025-11-26 00:10:52] 2025-11-26 05:09:46,672 | INFO     | mean y: 3160102.9797297297
[2025-11-26 00:10:52] 2025-11-26 05:09:46,672 | INFO     | intersect: 7237751793.444032
[2025-11-26 00:10:52] 2025-11-26 05:09:46,673 | INFO     | chi2: 5.769339906651784
[2025-11-26 00:10:52] 2025-11-26 05:09:46,673 | INFO     | current chi2=5.769339906651784 (change=26.269190457625434 %)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,673 | INFO     | sum of square deviations: 7640583475.944984
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | sum of deviations: -41543387856.49482
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | mean x: 1764124893.9862542
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | mean y: 3163353.87628866
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | intersect: 9595064931.668365
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | chi2: 5.763609008228726
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | current chi2=5.763609008228726 (change=0.09933369355566905 %)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,678 | INFO     | left removable region: 20
[2025-11-26 00:10:52] 2025-11-26 05:09:46,679 | INFO     | sum of square deviations: 5770054936.543357
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | sum of deviations: 124620985354.34715
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | mean x: 1764124711.0415094
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | mean y: 3251109.3320754715
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | intersect: -38098112256.481674
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | chi2: 0.0292539858888559
[2025-11-26 00:10:52] 2025-11-26 05:09:46,680 | INFO     | current memory leak: 21.60 B/s (using 265 data points, chi2=0.03)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | could have reported an average CPU frequency of 3799 MHz (14 samples)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | ..............................
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . Timing measurements:
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . get job = 0 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . initial setup = 3 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . payload setup = 13 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . stage-in = 0 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . payload execution = 18311 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . stage-out = 5 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | . log creation = 1 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,681 | INFO     | ..............................
[2025-11-26 00:10:52] 2025-11-26 05:09:46,781 | INFO     | 
[2025-11-26 00:10:52] 2025-11-26 05:09:46,781 | INFO     | job summary report
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | --------------------------------------------------
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | PanDA job id: 6895674860
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | task id: 47556149
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | errors: (none)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | pilot state: finished 
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | transexitcode: 0
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | exeerrorcode: 0
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | exeerrordiag: 
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | exitcode: 0
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | exitmsg: OK
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | cpuconsumptiontime: 133972 s
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | nevents: 1000
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | neventsw: 0
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | pid: 2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | pgrp: 2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | corecount: 10
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | event service: False
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | sizes: {0: 2283486, 1: 2284342, 11: 2284632, 18328: 2318259, 18329: 2318258, 18335: 2327308, 18338: 2327492, 18372: 2327516}
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | --------------------------------------------------
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | 
[2025-11-26 00:10:52] 2025-11-26 05:09:46,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 00:10:52] 2025-11-26 05:09:46,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | job 6895674860 has completed (purged errors)
[2025-11-26 00:10:52] 2025-11-26 05:09:46,843 | INFO     | overall cleanup function is called
[2025-11-26 00:10:52] 2025-11-26 05:09:47,866 | INFO     | --- collectZombieJob: --- 10, [2976253]
[2025-11-26 00:10:52] 2025-11-26 05:09:47,866 | INFO     | zombie collector waiting for pid 2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:47,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:10:52] 2025-11-26 05:09:47,867 | INFO     | collected zombie processes
[2025-11-26 00:10:52] 2025-11-26 05:09:47,867 | INFO     | will attempt to kill all subprocesses of pid=2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:49,320 | INFO     | process IDs to be killed: [2976253] (in reverse order)
[2025-11-26 00:10:52] 2025-11-26 05:09:49,779 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:10:52] 2025-11-26 05:09:49,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:10:52] 2025-11-26 05:09:49,894 | INFO     | did not find any defunct processes belonging to 2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:50,137 | INFO     | did not find any defunct processes belonging to 2976253
[2025-11-26 00:10:52] 2025-11-26 05:09:50,160 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:10:52] 2025-11-26 05:09:50,161 | INFO     | ready for new job
[2025-11-26 00:10:52] 2025-11-26 05:09:50,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:10:52] 2025-11-26 05:09:50,162 | INFO     | ***************************************
[2025-11-26 00:10:52] 2025-11-26 05:09:50,162 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:10:52] 2025-11-26 05:09:50,162 | INFO     | ***************************************
[2025-11-26 00:10:52] 2025-11-26 05:09:50,163 | INFO     | 
[2025-11-26 00:10:52] 2025-11-26 05:09:50,171 | INFO     | architecture information:
[2025-11-26 00:10:52] 2025-11-26 05:09:50,171 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:10:52] 2025-11-26 05:09:50,241 | INFO     | cat /etc/os-release:
[2025-11-26 00:10:52] NAME="CentOS Linux"
[2025-11-26 00:10:52] VERSION="7 (Core)"
[2025-11-26 00:10:52] ID="centos"
[2025-11-26 00:10:52] ID_LIKE="rhel fedora"
[2025-11-26 00:10:52] VERSION_ID="7"
[2025-11-26 00:10:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:10:52] ANSI_COLOR="0;31"
[2025-11-26 00:10:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:10:52] HOME_URL="https://www.centos.org/"
[2025-11-26 00:10:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:10:52] 
[2025-11-26 00:10:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:10:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:10:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:10:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:10:52] 
[2025-11-26 00:10:52] 2025-11-26 05:09:50,242 | INFO     | ***************************************
[2025-11-26 00:10:52] 2025-11-26 05:09:50,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 00:10:52] 2025-11-26 05:09:50,904 | INFO     | sufficient remaining disk space (57497616384 B)
[2025-11-26 00:10:52] 2025-11-26 05:09:50,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:10:52] 2025-11-26 05:09:50,904 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:10:52] 2025-11-26 05:09:50,904 | INFO     | update_server=False
[2025-11-26 00:10:52] 2025-11-26 05:09:50,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:10:52] 2025-11-26 05:09:50,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:10:52] 2025-11-26 05:09:50,952 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 00:10:52] 2025-11-26 05:09:50,952 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 00:10:52] 2025-11-26 05:09:50,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:10:52] 2025-11-26 05:09:50,953 | INFO     | will abort loop
[2025-11-26 00:10:52] 2025-11-26 05:09:51,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:10:52] 2025-11-26 05:09:51,530 | INFO     | all data control threads have been joined
[2025-11-26 00:10:52] 2025-11-26 05:09:51,620 | INFO     | all payload control threads have been joined
[2025-11-26 00:10:52] 2025-11-26 05:09:51,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:10:52] 2025-11-26 05:09:51,910 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:51,958 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,263 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,398 | INFO     | [job] validate thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,404 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,536 | INFO     | [data] control thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,565 | INFO     | all job control threads have been joined
[2025-11-26 00:10:52] 2025-11-26 05:09:52,626 | INFO     | [payload] control thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,813 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,862 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,867 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,968 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:52,988 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:53,056 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:53,571 | INFO     | [job] control thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:09:54,934 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:10:52] 2025-11-26 05:10:20,003 | INFO     | PID=2966149 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:10:52] 2025-11-26 05:10:20,003 | INFO     | .. there are 106 such processes running
[2025-11-26 00:10:52] 2025-11-26 05:10:20,003 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:10:52] 2025-11-26 05:10:20,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:10:52] 2025-11-26 05:10:20,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:10:52] 2025-11-26 05:10:45,301 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:10:52] 2025-11-26 05:10:45,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157281888064)>', '<ExcThread(monitor, started 140156501739264)>']
[2025-11-26 00:10:52] 2025-11-26 05:10:46,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:10:52] 2025-11-26 05:10:46,231 | INFO     | [monitor] control thread has ended
[2025-11-26 00:10:52] 2025-11-26 05:10:50,464 | INFO     | all workflow threads have been joined
[2025-11-26 00:10:52] 2025-11-26 05:10:50,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:10:52] 2025-11-26 05:10:50,465 | INFO     | traces error code: 0
[2025-11-26 00:10:52] 2025-11-26 05:10:50,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:10:52] 2025-11-26 05:10:50,830 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:10:52] 2025-11-26 05:10:50,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:10:52] 2025-11-26 05:10:50,890 [wrapper] pilotpid: 2966149
[2025-11-26 00:10:52] 2025-11-26 05:10:50,939 [wrapper] Pilot exit status: 0
[2025-11-26 00:10:52] 2025-11-26 05:10:51,083 [wrapper] pandaids: 6895674860
[2025-11-26 00:10:52] 2025-11-26 05:10:51,671 [wrapper] cleanup supervisor_pilot 2140248 2966150
[2025-11-26 00:10:52] 2025-11-26 05:10:51,711 [wrapper] Test setup, not cleaning
[2025-11-26 00:10:52] 2025-11-26 05:10:51,748 [wrapper] apfmon messages muted
[2025-11-26 00:10:52] 2025-11-26 05:10:51,813 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:10:52] 2025-11-26 05:10:51,847 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:10:52]  *** Error codes and diagnostics ***
[2025-11-26 00:10:52]     "exeErrorCode": 0,
[2025-11-26 00:10:52]     "exeErrorDiag": "",
[2025-11-26 00:10:52]     "pilotErrorCode": 0,
[2025-11-26 00:10:52]     "pilotErrorDiag": "",
[2025-11-26 00:10:52]  *** Listing of results directory ***
[2025-11-26 00:10:52] total 1310124
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 10:13 pilot3.tar.gz
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 10:23 queuedata.json
[2025-11-26 00:10:52] -rwx------. 1 boincer umatlas     36292 Nov 24 10:23 runpilot2-wrapper.sh
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:10:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:02 run_atlas
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:02 job.xml
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas 410941086 Nov 25 19:02 EVNT.47483658._001367.pool.root.1
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:02 start_atlas.sh
[2025-11-26 00:10:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:02 shared
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 19:02 input.tar.gz
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:02 boinc_lockfile
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 19:02 pandaJob.out
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas        57 Nov 25 19:02 setup.sh.local
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas    991877 Nov 25 19:03 agis_schedconf.cvmfs.json
[2025-11-26 00:10:52] drwx------. 5 boincer umatlas      4096 Nov 25 19:03 pilot3
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas       532 Nov 25 23:57 boinc_task_state.xml
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas 918179960 Nov 26 00:08 HITS.47556149._003535.pool.root.1
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas      1054 Nov 26 00:08 memory_monitor_summary.json
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas   1516240 Nov 26 00:09 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas   1824481 Nov 26 00:09 log.47556149._003535.job.log.tgz.1
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas        95 Nov 26 00:09 pilot_heartbeat.json
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas      8581 Nov 26 00:09 heartbeat.json
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas      7173 Nov 26 00:09 init_data.xml
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 00:10 boinc_mmap_file
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas        29 Nov 26 00:10 wrapper_checkpoint.txt
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas      5011 Nov 26 00:10 pilotlog.txt
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas   2435817 Nov 26 00:10 log.47556149._003535.job.log.1
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas       353 Nov 26 00:10 output.list
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas       620 Nov 26 00:10 runtime_log
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas   4280320 Nov 26 00:10 result.tar.gz
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas      9340 Nov 26 00:10 runtime_log.err
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas       658 Nov 26 00:10 K4UKDmvanh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPjLKDmYg5m9n.diag
[2025-11-26 00:10:52] -rw-r--r--. 1 boincer umatlas     21166 Nov 26 00:10 stderr.txt
[2025-11-26 00:10:52] HITS file was successfully produced:
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas 918179960 Nov 26 00:08 shared/HITS.pool.root.1
[2025-11-26 00:10:52]  *** Contents of shared directory: ***
[2025-11-26 00:10:52] total 1302760
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas 410941086 Nov 25 19:02 ATLAS.root_0
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:02 start_atlas.sh
[2025-11-26 00:10:52] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 19:02 input.tar.gz
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas 918179960 Nov 26 00:08 HITS.pool.root.1
[2025-11-26 00:10:52] -rw-------. 1 boincer umatlas   4280320 Nov 26 00:10 result.tar.gz
00:10:54 (2959703): run_atlas exited; CPU time 134151.815135
00:10:54 (2959703): called boinc_finish(0)

</stderr_txt>
]]>

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