Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:08:59 (24843): wrapper (7.7.26015): starting
18:08:59 (24843): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 18:08:59] Arguments: --nthreads 12
[2025-11-25 18:08:59] Threads: 12
[2025-11-25 18:08:59] Checking for CVMFS
[2025-11-25 18:08:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 18:08:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 18:08:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 18:08:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 18:08:59] 2.11.2.0 2910 38102 95316 153301 2 58 14375720 20275200 1 130560 0 5739239 99.847 1716718 27380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 18:08:59] CVMFS is ok
[2025-11-25 18:08:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:08:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:08:59] Further information can be found at the LHC@home message board.
[2025-11-25 18:08:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:08:59] Checking for apptainer binary...
[2025-11-25 18:08:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 18:08:59] Running /usr/bin/apptainer --version
[2025-11-25 18:08:59] apptainer version 1.3.2-1.el7
[2025-11-25 18:08:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:09:00] c-205-11.aglt2.org
[2025-11-25 18:09:00] apptainer works
[2025-11-25 18:09:00] Set ATHENA_PROC_NUMBER=12
[2025-11-25 18:09:00] Set ATHENA_CORE_NUMBER=12
[2025-11-25 18:09:00] Starting ATLAS job with PandaID=6896450937
[2025-11-25 18:09:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:08:03]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:08:03] 2025-11-26 06:07:07,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:08:03] 2025-11-26 06:07:07,906 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:08:03] 2025-11-26 06:07:07,906 | INFO     | sum of square deviations: 21528195965.931873
[2025-11-26 01:08:03] 2025-11-26 06:07:07,910 | INFO     | sum of deviations: 323301757549.2333
[2025-11-26 01:08:03] 2025-11-26 06:07:07,910 | INFO     | mean x: 1764124690.274939
[2025-11-26 01:08:03] 2025-11-26 06:07:07,910 | INFO     | mean y: 3837042.3430656935
[2025-11-26 01:08:03] 2025-11-26 06:07:07,910 | INFO     | intersect: -26489075499.16522
[2025-11-26 01:08:03] 2025-11-26 06:07:07,911 | INFO     | chi2: 6.6745726008344
[2025-11-26 01:08:03] 2025-11-26 06:07:07,911 | INFO     | sum of square deviations: 20752057738.049072
[2025-11-26 01:08:03] 2025-11-26 06:07:07,915 | INFO     | sum of deviations: 515342154171.96045
[2025-11-26 01:08:03] 2025-11-26 06:07:07,915 | INFO     | mean x: 1764124537.778325
[2025-11-26 01:08:03] 2025-11-26 06:07:07,915 | INFO     | mean y: 3874743.6773399017
[2025-11-26 01:08:03] 2025-11-26 06:07:07,915 | INFO     | intersect: -43805165834.472305
[2025-11-26 01:08:03] 2025-11-26 06:07:07,916 | INFO     | chi2: 3.15778293709936
[2025-11-26 01:08:03] 2025-11-26 06:07:07,916 | INFO     | current chi2=3.15778293709936 (change=52.689361162921514 %)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,916 | INFO     | sum of square deviations: 19994803585.157124
[2025-11-26 01:08:03] 2025-11-26 06:07:07,920 | INFO     | sum of deviations: 584483148820.9901
[2025-11-26 01:08:03] 2025-11-26 06:07:07,920 | INFO     | mean x: 1764124385.2817955
[2025-11-26 01:08:03] 2025-11-26 06:07:07,921 | INFO     | mean y: 3888594.902743142
[2025-11-26 01:08:03] 2025-11-26 06:07:07,921 | INFO     | intersect: -51564558738.42448
[2025-11-26 01:08:03] 2025-11-26 06:07:07,921 | INFO     | chi2: 2.366480398724633
[2025-11-26 01:08:03] 2025-11-26 06:07:07,921 | INFO     | current chi2=2.366480398724633 (change=25.058800878238724 %)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,922 | INFO     | sum of square deviations: 19256200944.755054
[2025-11-26 01:08:03] 2025-11-26 06:07:07,926 | INFO     | sum of deviations: 570405199442.7042
[2025-11-26 01:08:03] 2025-11-26 06:07:07,926 | INFO     | mean x: 1764124232.7853534
[2025-11-26 01:08:03] 2025-11-26 06:07:07,926 | INFO     | mean y: 3885688.4318181816
[2025-11-26 01:08:03] 2025-11-26 06:07:07,926 | INFO     | intersect: -52252820487.96071
[2025-11-26 01:08:03] 2025-11-26 06:07:07,926 | INFO     | chi2: 2.364461879991939
[2025-11-26 01:08:03] 2025-11-26 06:07:07,927 | INFO     | current chi2=2.364461879991939 (change=0.08529623713689105 %)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,927 | INFO     | right removable region: 395
[2025-11-26 01:08:03] 2025-11-26 06:07:07,927 | INFO     | sum of square deviations: 20751988808.04906
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | sum of deviations: 182285323048.47787
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | mean x: 1764124842.778325
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | mean y: 3864642.3497536946
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | intersect: -15492195510.639704
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | chi2: 4.489590914399697
[2025-11-26 01:08:03] 2025-11-26 06:07:07,932 | INFO     | current chi2=4.489590914399697 (change=32.735904111097014 %)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,933 | INFO     | sum of square deviations: 19994690490.718006
[2025-11-26 01:08:03] 2025-11-26 06:07:07,937 | INFO     | sum of deviations: 145559975113.06226
[2025-11-26 01:08:03] 2025-11-26 06:07:07,937 | INFO     | mean x: 1764124995.2793016
[2025-11-26 01:08:03] 2025-11-26 06:07:07,937 | INFO     | mean y: 3872034.0798004987
[2025-11-26 01:08:03] 2025-11-26 06:07:07,937 | INFO     | intersect: -12838836910.49687
[2025-11-26 01:08:03] 2025-11-26 06:07:07,938 | INFO     | chi2: 4.42673276151022
[2025-11-26 01:08:03] 2025-11-26 06:07:07,938 | INFO     | current chi2=4.42673276151022 (change=1.4000864240853033 %)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,938 | INFO     | left removable region: 20
[2025-11-26 01:08:03] 2025-11-26 06:07:07,939 | INFO     | sum of square deviations: 16352244580.549284
[2025-11-26 01:08:03] 2025-11-26 06:07:07,942 | INFO     | sum of deviations: 339233352224.60815
[2025-11-26 01:08:03] 2025-11-26 06:07:07,942 | INFO     | mean x: 1764124812.2986667
[2025-11-26 01:08:03] 2025-11-26 06:07:07,942 | INFO     | mean y: 3934514.816
[2025-11-26 01:08:03] 2025-11-26 06:07:07,942 | INFO     | intersect: -36593486155.52612
[2025-11-26 01:08:03] 2025-11-26 06:07:07,942 | INFO     | chi2: 0.03152401008600552
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | current memory leak: 20.75 B/s (using 375 data points, chi2=0.03)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | could have reported an average CPU frequency of 2368 MHz (17 samples)
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | ..............................
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | . Timing measurements:
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | . get job = 0 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,943 | INFO     | . initial setup = 2 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | . payload setup = 7 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | . stage-in = 0 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | . payload execution = 25033 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | . stage-out = 3 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | . log creation = 0 s
[2025-11-26 01:08:03] 2025-11-26 06:07:07,944 | INFO     | ..............................
[2025-11-26 01:08:03] 2025-11-26 06:07:08,026 | INFO     | 
[2025-11-26 01:08:03] 2025-11-26 06:07:08,026 | INFO     | job summary report
[2025-11-26 01:08:03] 2025-11-26 06:07:08,026 | INFO     | --------------------------------------------------
[2025-11-26 01:08:03] 2025-11-26 06:07:08,027 | INFO     | PanDA job id: 6896450937
[2025-11-26 01:08:03] 2025-11-26 06:07:08,027 | INFO     | task id: 47556161
[2025-11-26 01:08:03] 2025-11-26 06:07:08,027 | INFO     | errors: (none)
[2025-11-26 01:08:03] 2025-11-26 06:07:08,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:08:03] 2025-11-26 06:07:08,027 | INFO     | pilot state: finished 
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | transexitcode: 0
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | exeerrorcode: 0
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | exeerrordiag: 
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | exitcode: 0
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | exitmsg: OK
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | cpuconsumptiontime: 289556 s
[2025-11-26 01:08:03] 2025-11-26 06:07:08,028 | INFO     | nevents: 1000
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | neventsw: 0
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | pid: 3241
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | pgrp: 3241
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | corecount: 12
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | event service: False
[2025-11-26 01:08:03] 2025-11-26 06:07:08,029 | INFO     | sizes: {0: 2283383, 1: 2284239, 6: 2284501, 12: 2284529, 25043: 2321397, 25044: 2321396, 25048: 2330574, 25049: 2330630, 25055: 2330940}
[2025-11-26 01:08:03] 2025-11-26 06:07:08,030 | INFO     | --------------------------------------------------
[2025-11-26 01:08:03] 2025-11-26 06:07:08,030 | INFO     | 
[2025-11-26 01:08:03] 2025-11-26 06:07:08,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 01:08:03] 2025-11-26 06:07:08,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,055 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,055 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,055 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:08:03] 2025-11-26 06:07:08,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:08:03] 2025-11-26 06:07:08,058 | INFO     | job 6896450937 has completed (purged errors)
[2025-11-26 01:08:03] 2025-11-26 06:07:08,058 | INFO     | overall cleanup function is called
[2025-11-26 01:08:03] 2025-11-26 06:07:09,075 | INFO     | --- collectZombieJob: --- 10, [3241]
[2025-11-26 01:08:03] 2025-11-26 06:07:09,075 | INFO     | zombie collector waiting for pid 3241
[2025-11-26 01:08:03] 2025-11-26 06:07:09,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:08:03] 2025-11-26 06:07:09,075 | INFO     | collected zombie processes
[2025-11-26 01:08:03] 2025-11-26 06:07:09,076 | INFO     | will attempt to kill all subprocesses of pid=3241
[2025-11-26 01:08:03] 2025-11-26 06:07:09,166 | INFO     | process IDs to be killed: [3241] (in reverse order)
[2025-11-26 01:08:03] 2025-11-26 06:07:09,221 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:08:03] 2025-11-26 06:07:09,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:08:03] 2025-11-26 06:07:09,225 | INFO     | did not find any defunct processes belonging to 3241
[2025-11-26 01:08:03] 2025-11-26 06:07:09,228 | INFO     | did not find any defunct processes belonging to 3241
[2025-11-26 01:08:03] 2025-11-26 06:07:09,230 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:08:03] 2025-11-26 06:07:09,230 | INFO     | ready for new job
[2025-11-26 01:08:03] 2025-11-26 06:07:09,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:08:03] 2025-11-26 06:07:09,233 | INFO     | ***************************************
[2025-11-26 01:08:03] 2025-11-26 06:07:09,233 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:08:03] 2025-11-26 06:07:09,233 | INFO     | ***************************************
[2025-11-26 01:08:03] 2025-11-26 06:07:09,233 | INFO     | 
[2025-11-26 01:08:03] 2025-11-26 06:07:09,234 | INFO     | architecture information:
[2025-11-26 01:08:03] 2025-11-26 06:07:09,234 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:08:03] 2025-11-26 06:07:09,251 | INFO     | cat /etc/os-release:
[2025-11-26 01:08:03] NAME="CentOS Linux"
[2025-11-26 01:08:03] VERSION="7 (Core)"
[2025-11-26 01:08:03] ID="centos"
[2025-11-26 01:08:03] ID_LIKE="rhel fedora"
[2025-11-26 01:08:03] VERSION_ID="7"
[2025-11-26 01:08:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:08:03] ANSI_COLOR="0;31"
[2025-11-26 01:08:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:08:03] HOME_URL="https://www.centos.org/"
[2025-11-26 01:08:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:08:03] 
[2025-11-26 01:08:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:08:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:08:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:08:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:08:03] 
[2025-11-26 01:08:03] 2025-11-26 06:07:09,251 | INFO     | ***************************************
[2025-11-26 01:08:03] 2025-11-26 06:07:09,754 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 01:08:03] 2025-11-26 06:07:09,771 | INFO     | sufficient remaining disk space (28289531904 B)
[2025-11-26 01:08:03] 2025-11-26 06:07:09,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:08:03] 2025-11-26 06:07:09,771 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:08:03] 2025-11-26 06:07:09,771 | INFO     | update_server=False
[2025-11-26 01:08:03] 2025-11-26 06:07:09,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:08:03] 2025-11-26 06:07:09,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:08:03] 2025-11-26 06:07:09,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:08:03] 2025-11-26 06:07:09,917 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 01:08:03] 2025-11-26 06:07:09,917 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 01:08:03] 2025-11-26 06:07:09,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:08:03] 2025-11-26 06:07:09,917 | INFO     | will abort loop
[2025-11-26 01:08:03] 2025-11-26 06:07:09,935 | INFO     | all job control threads have been joined
[2025-11-26 01:08:03] 2025-11-26 06:07:10,153 | INFO     | all data control threads have been joined
[2025-11-26 01:08:03] 2025-11-26 06:07:10,652 | INFO     | all payload control threads have been joined
[2025-11-26 01:08:03] 2025-11-26 06:07:10,777 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:10,778 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:10,923 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:10,941 | INFO     | [job] control thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,007 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,159 | INFO     | [data] control thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,247 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,371 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,376 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,657 | INFO     | [payload] control thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,667 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:11,778 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:12,171 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:12,188 | INFO     | [job] validate thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:12,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:08:03] 2025-11-26 06:07:16,337 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:08:03] 2025-11-26 06:07:39,834 | INFO     | PID=28563 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 01:08:03] 2025-11-26 06:07:39,834 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:08:03] 2025-11-26 06:07:39,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:08:03] 2025-11-26 06:07:39,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:08:03] 2025-11-26 06:07:56,974 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:08:03] 2025-11-26 06:07:58,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164916655936)>', '<ExcThread(monitor, started 140163900499712)>']
[2025-11-26 01:08:03] 2025-11-26 06:07:58,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:08:03] 2025-11-26 06:07:58,925 | INFO     | [monitor] control thread has ended
[2025-11-26 01:08:03] 2025-11-26 06:08:03,032 | INFO     | all workflow threads have been joined
[2025-11-26 01:08:03] 2025-11-26 06:08:03,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:08:03] 2025-11-26 06:08:03,032 | INFO     | traces error code: 0
[2025-11-26 01:08:03] 2025-11-26 06:08:03,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:08:03] 2025-11-26 06:08:03,134 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:08:03] 2025-11-26 06:08:03,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:08:03] 2025-11-26 06:08:03,141 [wrapper] pilotpid: 28563
[2025-11-26 01:08:03] 2025-11-26 06:08:03,145 [wrapper] Pilot exit status: 0
[2025-11-26 01:08:03] 2025-11-26 06:08:03,159 [wrapper] pandaids: 6896450937
[2025-11-26 01:08:03] 2025-11-26 06:08:03,203 [wrapper] cleanup supervisor_pilot  6170 28564
[2025-11-26 01:08:03] 2025-11-26 06:08:03,208 [wrapper] Test setup, not cleaning
[2025-11-26 01:08:03] 2025-11-26 06:08:03,212 [wrapper] apfmon messages muted
[2025-11-26 01:08:03] 2025-11-26 06:08:03,216 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:08:03] 2025-11-26 06:08:03,220 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:08:03]  *** Error codes and diagnostics ***
[2025-11-26 01:08:03]     "exeErrorCode": 0,
[2025-11-26 01:08:03]     "exeErrorDiag": "",
[2025-11-26 01:08:03]     "pilotErrorCode": 0,
[2025-11-26 01:08:03]     "pilotErrorDiag": "",
[2025-11-26 01:08:03]  *** Listing of results directory ***
[2025-11-26 01:08:03] total 1308028
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 01:08:03] -rwx------ 1 boincer umatlas     36292 Nov 24 23:10 runpilot2-wrapper.sh
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 23:11 queuedata.json
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas       100 Nov 25 18:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:08:03] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 18:08 run_atlas
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas       105 Nov 25 18:08 job.xml
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas 408743367 Nov 25 18:08 EVNT.47483658._002080.pool.root.1
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:08 start_atlas.sh
[2025-11-26 01:08:03] drwxrwx--x 2 boincer umatlas      4096 Nov 25 18:08 shared
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 18:08 input.tar.gz
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas         0 Nov 25 18:08 boinc_lockfile
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 18:09 pandaJob.out
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas    991877 Nov 25 18:09 agis_schedconf.cvmfs.json
[2025-11-26 01:08:03] drwx------ 5 boincer umatlas      4096 Nov 25 18:09 pilot3
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas       532 Nov 26 00:57 boinc_task_state.xml
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas      5871 Nov 26 01:02 init_data.xml
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas 915391076 Nov 26 01:06 HITS.47556161._000635.pool.root.1
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas        95 Nov 26 01:06 pilot_heartbeat.json
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas      1064 Nov 26 01:06 memory_monitor_summary.json
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas   1516240 Nov 26 01:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas   2170342 Nov 26 01:07 log.47556161._000635.job.log.tgz.1
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas      8677 Nov 26 01:07 heartbeat.json
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 01:07 boinc_mmap_file
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas        29 Nov 26 01:07 wrapper_checkpoint.txt
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas      4932 Nov 26 01:08 pilotlog.txt
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas   3514626 Nov 26 01:08 log.47556161._000635.job.log.1
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas       353 Nov 26 01:08 output.list
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas       620 Nov 26 01:08 runtime_log
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas   5703680 Nov 26 01:08 result.tar.gz
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas       669 Nov 26 01:08 SpILDmMZzh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeJJKDmatm1En.diag
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas      8820 Nov 26 01:08 runtime_log.err
[2025-11-26 01:08:03] -rw-r--r-- 1 boincer umatlas     21124 Nov 26 01:08 stderr.txt
[2025-11-26 01:08:03] HITS file was successfully produced:
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas 915391076 Nov 26 01:06 shared/HITS.pool.root.1
[2025-11-26 01:08:03]  *** Contents of shared directory: ***
[2025-11-26 01:08:03] total 1299276
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas 408743367 Nov 25 18:08 ATLAS.root_0
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 18:08 start_atlas.sh
[2025-11-26 01:08:03] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 18:08 input.tar.gz
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas 915391076 Nov 26 01:06 HITS.pool.root.1
[2025-11-26 01:08:03] -rw------- 1 boincer umatlas   5703680 Nov 26 01:08 result.tar.gz
01:08:04 (24843): run_atlas exited; CPU time 286355.359770
01:08:04 (24843): called boinc_finish(0)

</stderr_txt>
]]>

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