Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:10:21 (2372898): wrapper (7.7.26015): starting
01:10:21 (2372898): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 01:10:21] Arguments: --nthreads 3
[2025-11-26 01:10:21] Threads: 3
[2025-11-26 01:10:21] Checking for CVMFS
[2025-11-26 01:10:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:10:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:10:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:10:21] 2.9.2.0 2184780 40 53216 153302 3 88 35464659 36864000 0 130560 0 563475 100.000 6 70 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 01:10:21] CVMFS is ok
[2025-11-26 01:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 01:10:21] Further information can be found at the LHC@home message board.
[2025-11-26 01:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:10:21] Checking for apptainer binary...
[2025-11-26 01:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:10:21] Running /usr/bin/apptainer --version
[2025-11-26 01:10:21] apptainer version 1.4.1-1.1
[2025-11-26 01:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:10:21] thA335
[2025-11-26 01:10:21] apptainer works
[2025-11-26 01:10:21] Set ATHENA_PROC_NUMBER=3
[2025-11-26 01:10:21] Set ATHENA_CORE_NUMBER=3
[2025-11-26 01:10:21] Starting ATLAS job with PandaID=6896450962
[2025-11-26 01:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:14:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:14:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:14:41] 
[2025-11-26 01:14:41] 2025-11-26 00:13:48,541 | INFO     | ***************************************
[2025-11-26 01:14:41] 2025-11-26 00:13:49,045 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | INFO     | sufficient remaining disk space (827377844224 B)
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | INFO     | update_server=False
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:14:41] 2025-11-26 00:13:49,058 | INFO     | aborting loop
[2025-11-26 01:14:41] 2025-11-26 00:13:49,081 | INFO     | all data control threads have been joined
[2025-11-26 01:14:41] 2025-11-26 00:13:49,363 | INFO     | all job control threads have been joined
[2025-11-26 01:14:41] 2025-11-26 00:13:49,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:14:41] 2025-11-26 00:13:50,064 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,065 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,066 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,086 | INFO     | [data] control thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,102 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,158 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,369 | INFO     | [job] control thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:50,490 | INFO     | all payload control threads have been joined
[2025-11-26 01:14:41] 2025-11-26 00:13:51,070 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,118 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,279 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,464 | INFO     | [job] validate thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,496 | INFO     | [payload] control thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,559 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:51,871 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:13:52,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:14:41] 2025-11-26 00:13:56,188 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:14:41] 2025-11-26 00:14:19,845 | INFO     | PID=2376625 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 01:14:41] 2025-11-26 00:14:19,845 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:14:41] 2025-11-26 00:14:19,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:14:41] 2025-11-26 00:14:19,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:14:41] 2025-11-26 00:14:34,823 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:14:41] 2025-11-26 00:14:35,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216117458752)>', '<ExcThread(monitor, started 140215624648448)>']
[2025-11-26 01:14:41] 2025-11-26 00:14:35,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:14:41] 2025-11-26 00:14:35,930 | INFO     | [monitor] control thread has ended
[2025-11-26 01:14:41] 2025-11-26 00:14:40,855 | INFO     | all workflow threads have been joined
[2025-11-26 01:14:41] 2025-11-26 00:14:40,855 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:14:41] 2025-11-26 00:14:40,856 | INFO     | traces error code: 0
[2025-11-26 01:14:41] 2025-11-26 00:14:40,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:14:41] 2025-11-26 00:14:40,919 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:14:41] 2025-11-26 00:14:40,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:14:41] 2025-11-26 00:14:40,924 [wrapper] pilotpid: 2376625
[2025-11-26 01:14:41] 2025-11-26 00:14:40,927 [wrapper] Pilot exit status: 0
[2025-11-26 01:14:41] 2025-11-26 00:14:40,934 [wrapper] pandaids: 6896450962
[2025-11-26 01:14:41] 2025-11-26 00:14:40,951 [wrapper] cleanup supervisor_pilot 2376631 2376626
[2025-11-26 01:14:41] 2025-11-26 00:14:40,954 [wrapper] Test setup, not cleaning
[2025-11-26 01:14:41] 2025-11-26 00:14:40,957 [wrapper] apfmon messages muted
[2025-11-26 01:14:41] 2025-11-26 00:14:40,959 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:14:41] 2025-11-26 00:14:40,961 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:14:41]  *** Error codes and diagnostics ***
[2025-11-26 01:14:41]     "exeErrorCode": 65,
[2025-11-26 01:14:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:14:41]     "pilotErrorCode": 1305,
[2025-11-26 01:14:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 01:14:41]  *** Listing of results directory ***
[2025-11-26 01:14:41] total 403428
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc    576529 Nov 25 05:09 pilot3.tar.gz
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      5112 Nov 25 05:11 queuedata.json
[2025-11-26 01:14:41] -rwx------ 1 boinc boinc     36292 Nov 25 05:12 runpilot2-wrapper.sh
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:14:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:10 run_atlas
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:10 job.xml
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc 408917340 Nov 26 01:10 EVNT.47483658._001504.pool.root.1
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc    590108 Nov 26 01:10 input.tar.gz
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:10 start_atlas.sh
[2025-11-26 01:14:41] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:10 shared
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:10 boinc_setup_complete
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      6196 Nov 26 01:10 init_data.xml
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:10 boinc_lockfile
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      2785 Nov 26 01:10 pandaJob.out
[2025-11-26 01:14:41] -rw------- 1 boinc boinc    991877 Nov 26 01:10 agis_schedconf.cvmfs.json
[2025-11-26 01:14:41] -rw------- 1 boinc boinc   1516240 Nov 26 01:10 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:14:41] drwx------ 5 boinc boinc      4096 Nov 26 01:10 pilot3
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc       523 Nov 26 01:11 boinc_task_state.xml
[2025-11-26 01:14:41] -rw------- 1 boinc boinc       959 Nov 26 01:11 memory_monitor_summary.json
[2025-11-26 01:14:41] -rw------- 1 boinc boinc     55600 Nov 26 01:11 log.47556149._004902.job.log.tgz.1
[2025-11-26 01:14:41] -rw------- 1 boinc boinc        95 Nov 26 01:13 pilot_heartbeat.json
[2025-11-26 01:14:41] -rw------- 1 boinc boinc      8405 Nov 26 01:13 heartbeat.json
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      8192 Nov 26 01:14 boinc_mmap_file
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc        23 Nov 26 01:14 wrapper_checkpoint.txt
[2025-11-26 01:14:41] -rw------- 1 boinc boinc      4752 Nov 26 01:14 pilotlog.txt
[2025-11-26 01:14:41] -rw------- 1 boinc boinc     93260 Nov 26 01:14 log.47556149._004902.job.log.1
[2025-11-26 01:14:41] -rw------- 1 boinc boinc       186 Nov 26 01:14 output.list
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc       620 Nov 26 01:14 runtime_log
[2025-11-26 01:14:41] -rw------- 1 boinc boinc    163840 Nov 26 01:14 result.tar.gz
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      8744 Nov 26 01:14 runtime_log.err
[2025-11-26 01:14:41] -rw------- 1 boinc boinc       648 Nov 26 01:14 4JVMDmdazh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmk6LKDmyEyhhm.diag
[2025-11-26 01:14:41] -rw-r--r-- 1 boinc boinc      8409 Nov 26 01:14 stderr.txt
[2025-11-26 01:14:41] No HITS result produced
[2025-11-26 01:14:41]  *** Contents of shared directory: ***
[2025-11-26 01:14:41] total 400096
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc 408917340 Nov 26 01:10 ATLAS.root_0
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc    590108 Nov 26 01:10 input.tar.gz
[2025-11-26 01:14:41] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:10 start_atlas.sh
[2025-11-26 01:14:41] -rw------- 1 boinc boinc    163840 Nov 26 01:14 result.tar.gz
01:14:43 (2372898): run_atlas exited; CPU time 31.740153
01:14:43 (2372898): called boinc_finish(0)

</stderr_txt>
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