Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:36 (1158141): wrapper (7.7.26015): starting
19:01:36 (1158141): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:01:37] Arguments: --nthreads 8
[2025-11-25 19:01:37] Threads: 8
[2025-11-25 19:01:37] Checking for CVMFS
[2025-11-25 19:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:01:37] 2.13.3.0 14337 29251 372356 153302 3 419 28465341 40960001 26946 16776704 0 157189962 99.675 129492526 38168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:01:37] CVMFS is ok
[2025-11-25 19:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:01:37] Further information can be found at the LHC@home message board.
[2025-11-25 19:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:01:37] Checking for apptainer binary...
[2025-11-25 19:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:01:37] Running /usr/bin/apptainer --version
[2025-11-25 19:01:37] apptainer version 1.4.4-1.el9
[2025-11-25 19:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:01:37] c7-10-12.aglt2.org
[2025-11-25 19:01:37] apptainer works
[2025-11-25 19:01:37] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:01:37] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:01:37] Starting ATLAS job with PandaID=6895674501
[2025-11-25 19:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:47:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:47:37] 2025-11-26 13:46:40,948 | INFO     | monitor loop #3140: job 0:6895674501 is in state 'finished'
[2025-11-26 08:47:37] 2025-11-26 13:46:40,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:47:37] 2025-11-26 13:46:41,383 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3269.553468749999
[2025-11-26 08:47:37] 2025-11-26 13:46:41,395 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895674501/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,396 | INFO     | extracted standard info from prmon json
[2025-11-26 08:47:37] 2025-11-26 13:46:41,396 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:47:37] 2025-11-26 13:46:41,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:47:37] 2025-11-26 13:46:41,408 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:47:37] 2025-11-26 13:46:41,409 | INFO     | sum of square deviations: 165400552122.14572
[2025-11-26 08:47:37] 2025-11-26 13:46:41,422 | INFO     | sum of deviations: 1069088518655.6683
[2025-11-26 08:47:37] 2025-11-26 13:46:41,422 | INFO     | mean x: 1764140070.1307027
[2025-11-26 08:47:37] 2025-11-26 13:46:41,422 | INFO     | mean y: 2901045.7200986436
[2025-11-26 08:47:37] 2025-11-26 13:46:41,423 | INFO     | intersect: -11399853480.058886
[2025-11-26 08:47:37] 2025-11-26 13:46:41,423 | INFO     | chi2: 5.754635848834312
[2025-11-26 08:47:37] 2025-11-26 13:46:41,424 | INFO     | sum of square deviations: 162360430608.2136
[2025-11-26 08:47:37] 2025-11-26 13:46:41,437 | INFO     | sum of deviations: 1333165845692.8037
[2025-11-26 08:47:37] 2025-11-26 13:46:41,437 | INFO     | mean x: 1764139917.637717
[2025-11-26 08:47:37] 2025-11-26 13:46:41,437 | INFO     | mean y: 2914284.2630272955
[2025-11-26 08:47:37] 2025-11-26 13:46:41,437 | INFO     | intersect: -14482703155.94436
[2025-11-26 08:47:37] 2025-11-26 13:46:41,438 | INFO     | chi2: 2.7302456863669144
[2025-11-26 08:47:37] 2025-11-26 13:46:41,438 | INFO     | current chi2=2.7302456863669144 (change=52.55571754518634 %)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,439 | INFO     | sum of square deviations: 159357700205.77524
[2025-11-26 08:47:37] 2025-11-26 13:46:41,451 | INFO     | sum of deviations: 1390914184442.888
[2025-11-26 08:47:37] 2025-11-26 13:46:41,451 | INFO     | mean x: 1764139765.142322
[2025-11-26 08:47:37] 2025-11-26 13:46:41,451 | INFO     | mean y: 2917205.7378277155
[2025-11-26 08:47:37] 2025-11-26 13:46:41,451 | INFO     | intersect: -15394939436.945288
[2025-11-26 08:47:37] 2025-11-26 13:46:41,452 | INFO     | chi2: 2.357692102897205
[2025-11-26 08:47:37] 2025-11-26 13:46:41,452 | INFO     | current chi2=2.357692102897205 (change=13.645423389184408 %)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,452 | INFO     | right removable region: 800
[2025-11-26 08:47:37] 2025-11-26 13:46:41,453 | INFO     | sum of square deviations: 162359969816.7599
[2025-11-26 08:47:37] 2025-11-26 13:46:41,465 | INFO     | sum of deviations: 863552043765.3004
[2025-11-26 08:47:37] 2025-11-26 13:46:41,465 | INFO     | mean x: 1764140222.6352358
[2025-11-26 08:47:37] 2025-11-26 13:46:41,465 | INFO     | mean y: 2911334.630272953
[2025-11-26 08:47:37] 2025-11-26 13:46:41,465 | INFO     | intersect: -9380108977.978651
[2025-11-26 08:47:37] 2025-11-26 13:46:41,466 | INFO     | chi2: 3.6627135739870234
[2025-11-26 08:47:37] 2025-11-26 13:46:41,466 | INFO     | current chi2=3.6627135739870234 (change=36.35194875573298 %)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,467 | INFO     | sum of square deviations: 159357073741.43845
[2025-11-26 08:47:37] 2025-11-26 13:46:41,480 | INFO     | sum of deviations: 804504124417.6761
[2025-11-26 08:47:37] 2025-11-26 13:46:41,480 | INFO     | mean x: 1764140375.1348314
[2025-11-26 08:47:37] 2025-11-26 13:46:41,480 | INFO     | mean y: 2914332.327091136
[2025-11-26 08:47:37] 2025-11-26 13:46:41,480 | INFO     | intersect: -8903236957.514654
[2025-11-26 08:47:37] 2025-11-26 13:46:41,481 | INFO     | chi2: 3.590605429220157
[2025-11-26 08:47:37] 2025-11-26 13:46:41,481 | INFO     | current chi2=3.590605429220157 (change=1.9687082626112555 %)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,481 | INFO     | left removable region: 20
[2025-11-26 08:47:37] 2025-11-26 13:46:41,481 | INFO     | sum of square deviations: 147149369125.74915
[2025-11-26 08:47:37] 2025-11-26 13:46:41,493 | INFO     | sum of deviations: 1036507381503.3533
[2025-11-26 08:47:37] 2025-11-26 13:46:41,493 | INFO     | mean x: 1764140344.6487179
[2025-11-26 08:47:37] 2025-11-26 13:46:41,493 | INFO     | mean y: 2935161.453846154
[2025-11-26 08:47:37] 2025-11-26 13:46:41,493 | INFO     | intersect: -12423516274.254656
[2025-11-26 08:47:37] 2025-11-26 13:46:41,494 | INFO     | chi2: 0.12820563521127445
[2025-11-26 08:47:37] 2025-11-26 13:46:41,494 | INFO     | current memory leak: 7.04 B/s (using 780 data points, chi2=0.13)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | could have reported an average CPU frequency of 3252 MHz (31 samples)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | ..............................
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . Timing measurements:
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . get job = 0 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . initial setup = 2 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . payload setup = 11 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . stage-in = 0 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,495 | INFO     | . payload execution = 49425 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,496 | INFO     | . stage-out = 3 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,496 | INFO     | . log creation = 0 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,496 | INFO     | ..............................
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | 
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | job summary report
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | --------------------------------------------------
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | PanDA job id: 6895674501
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | task id: 47556161
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | errors: (none)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:47:37] 2025-11-26 13:46:41,573 | INFO     | pilot state: finished 
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | transexitcode: 0
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | exeerrorcode: 0
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | exeerrordiag: 
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | exitcode: 0
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | exitmsg: OK
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | cpuconsumptiontime: 201383 s
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | nevents: 1000
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | neventsw: 0
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | pid: 1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | pgrp: 1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | corecount: 8
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | event service: False
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | sizes: {0: 2284313, 1: 2284313, 10: 2284603, 11: 2284631, 49441: 2332869, 49446: 2341863, 49448: 2342047, 49457: 2342293}
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | --------------------------------------------------
[2025-11-26 08:47:37] 2025-11-26 13:46:41,574 | INFO     | 
[2025-11-26 08:47:37] 2025-11-26 13:46:41,575 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 08:47:37] 2025-11-26 13:46:41,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | job 6895674501 has completed (purged errors)
[2025-11-26 08:47:37] 2025-11-26 13:46:41,598 | INFO     | overall cleanup function is called
[2025-11-26 08:47:37] 2025-11-26 13:46:42,616 | INFO     | --- collectZombieJob: --- 10, [1170184]
[2025-11-26 08:47:37] 2025-11-26 13:46:42,616 | INFO     | zombie collector waiting for pid 1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:42,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:47:37] 2025-11-26 13:46:42,617 | INFO     | collected zombie processes
[2025-11-26 08:47:37] 2025-11-26 13:46:42,617 | INFO     | will attempt to kill all subprocesses of pid=1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:43,072 | INFO     | process IDs to be killed: [1170184] (in reverse order)
[2025-11-26 08:47:37] 2025-11-26 13:46:43,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:47:37] 2025-11-26 13:46:43,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:47:37] 2025-11-26 13:46:43,271 | INFO     | did not find any defunct processes belonging to 1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:43,294 | INFO     | did not find any defunct processes belonging to 1170184
[2025-11-26 08:47:37] 2025-11-26 13:46:43,296 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:47:37] 2025-11-26 13:46:43,296 | INFO     | ready for new job
[2025-11-26 08:47:37] 2025-11-26 13:46:43,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:47:37] 2025-11-26 13:46:43,300 | INFO     | ***************************************
[2025-11-26 08:47:37] 2025-11-26 13:46:43,300 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:47:37] 2025-11-26 13:46:43,300 | INFO     | ***************************************
[2025-11-26 08:47:37] 2025-11-26 13:46:43,300 | INFO     | 
[2025-11-26 08:47:37] 2025-11-26 13:46:43,304 | INFO     | architecture information:
[2025-11-26 08:47:37] 2025-11-26 13:46:43,305 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:47:37] 2025-11-26 13:46:43,328 | INFO     | cat /etc/os-release:
[2025-11-26 08:47:37] NAME="CentOS Linux"
[2025-11-26 08:47:37] VERSION="7 (Core)"
[2025-11-26 08:47:37] ID="centos"
[2025-11-26 08:47:37] ID_LIKE="rhel fedora"
[2025-11-26 08:47:37] VERSION_ID="7"
[2025-11-26 08:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:47:37] ANSI_COLOR="0;31"
[2025-11-26 08:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:47:37] HOME_URL="https://www.centos.org/"
[2025-11-26 08:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:47:37] 
[2025-11-26 08:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:47:37] 
[2025-11-26 08:47:37] 2025-11-26 13:46:43,329 | INFO     | ***************************************
[2025-11-26 08:47:37] 2025-11-26 13:46:43,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 08:47:37] 2025-11-26 13:46:43,854 | INFO     | sufficient remaining disk space (81155588096 B)
[2025-11-26 08:47:37] 2025-11-26 13:46:43,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:47:37] 2025-11-26 13:46:43,855 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:47:37] 2025-11-26 13:46:43,855 | INFO     | update_server=False
[2025-11-26 08:47:37] 2025-11-26 13:46:43,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:47:37] 2025-11-26 13:46:43,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:47:37] 2025-11-26 13:46:44,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:47:37] 2025-11-26 13:46:44,197 | INFO     | all data control threads have been joined
[2025-11-26 08:47:37] 2025-11-26 13:46:44,347 | INFO     | all job control threads have been joined
[2025-11-26 08:47:37] 2025-11-26 13:46:44,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:47:37] 2025-11-26 13:46:44,477 | INFO     | aborting loop
[2025-11-26 08:47:37] 2025-11-26 13:46:44,859 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,049 | INFO     | all payload control threads have been joined
[2025-11-26 08:47:37] 2025-11-26 13:46:45,059 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,203 | INFO     | [data] control thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,292 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,320 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,352 | INFO     | [job] control thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,492 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:45,826 | INFO     | [job] validate thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,053 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,054 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,055 | INFO     | [payload] control thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,247 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,374 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:46,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:47:37] 2025-11-26 13:46:47,591 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:46:47,858 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:47:37] 2025-11-26 13:47:06,429 [wrapper] supervise_pilot (15 min periods counter: 56)
[2025-11-26 08:47:37] 2025-11-26 13:47:13,468 | INFO     | PID=1161966 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:47:37] 2025-11-26 13:47:13,468 | INFO     | .. there are 41 such processes running
[2025-11-26 08:47:37] 2025-11-26 13:47:13,469 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:47:37] 2025-11-26 13:47:13,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:47:37] 2025-11-26 13:47:13,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:47:37] 2025-11-26 13:47:31,252 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:47:37] 2025-11-26 13:47:32,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915337447232)>', '<ExcThread(monitor, started 139914859505408)>']
[2025-11-26 08:47:37] 2025-11-26 13:47:32,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:47:37] 2025-11-26 13:47:32,584 | INFO     | [monitor] control thread has ended
[2025-11-26 08:47:37] 2025-11-26 13:47:37,475 | INFO     | all workflow threads have been joined
[2025-11-26 08:47:37] 2025-11-26 13:47:37,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:47:37] 2025-11-26 13:47:37,475 | INFO     | traces error code: 0
[2025-11-26 08:47:37] 2025-11-26 13:47:37,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:47:37] 2025-11-26 13:47:37,594 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:47:37] 2025-11-26 13:47:37,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:47:37] 2025-11-26 13:47:37,600 [wrapper] pilotpid: 1161966
[2025-11-26 08:47:37] 2025-11-26 13:47:37,606 [wrapper] Pilot exit status: 0
[2025-11-26 08:47:37] 2025-11-26 13:47:37,654 [wrapper] pandaids: 6895674501
[2025-11-26 08:47:37] 2025-11-26 13:47:37,772 [wrapper] cleanup supervisor_pilot  376820 1161967
[2025-11-26 08:47:37] 2025-11-26 13:47:37,781 [wrapper] Test setup, not cleaning
[2025-11-26 08:47:37] 2025-11-26 13:47:37,791 [wrapper] apfmon messages muted
[2025-11-26 08:47:37] 2025-11-26 13:47:37,802 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:47:37] 2025-11-26 13:47:37,807 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:47:37]  *** Error codes and diagnostics ***
[2025-11-26 08:47:38]     "exeErrorCode": 0,
[2025-11-26 08:47:38]     "exeErrorDiag": "",
[2025-11-26 08:47:38]     "pilotErrorCode": 0,
[2025-11-26 08:47:38]     "pilotErrorDiag": "",
[2025-11-26 08:47:38]  *** Listing of results directory ***
[2025-11-26 08:47:38] total 1323352
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 08:41 queuedata.json
[2025-11-26 08:47:38] -rwx------. 1 boincer umatlas     36292 Nov 24 08:46 runpilot2-wrapper.sh
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:47:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:01 run_atlas
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:01 job.xml
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas 409598849 Nov 25 19:01 EVNT.47483658._002048.pool.root.1
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:01 start_atlas.sh
[2025-11-26 08:47:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:01 shared
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 19:01 input.tar.gz
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:01 boinc_lockfile
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 19:01 pandaJob.out
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas        57 Nov 25 19:01 setup.sh.local
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas    991877 Nov 25 19:02 agis_schedconf.cvmfs.json
[2025-11-26 08:47:38] drwx------. 5 boincer umatlas      4096 Nov 25 19:02 pilot3
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:37 boinc_task_state.xml
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas 924634311 Nov 26 08:45 HITS.47556161._000314.pool.root.1
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas      6904 Nov 26 08:46 init_data.xml
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas      1048 Nov 26 08:46 memory_monitor_summary.json
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas   2011786 Nov 26 08:46 log.47556161._000314.job.log.tgz.1
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas      8575 Nov 26 08:46 heartbeat.json
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas        95 Nov 26 08:47 pilot_heartbeat.json
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas      4824 Nov 26 08:47 pilotlog.txt
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:47 boinc_mmap_file
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas   6465755 Nov 26 08:47 log.47556161._000314.job.log.1
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:47 wrapper_checkpoint.txt
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas       353 Nov 26 08:47 output.list
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:47 runtime_log
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas   8499200 Nov 26 08:47 result.tar.gz
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 08:47 runtime_log.err
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas       660 Nov 26 08:47 2enNDmp4lh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSiLKDmDBGoFn.diag
[2025-11-26 08:47:38] -rw-r--r--. 1 boincer umatlas     21327 Nov 26 08:47 stderr.txt
[2025-11-26 08:47:38] HITS file was successfully produced:
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas 924634311 Nov 26 08:45 shared/HITS.pool.root.1
[2025-11-26 08:47:38]  *** Contents of shared directory: ***
[2025-11-26 08:47:38] total 1311868
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas 409598849 Nov 25 19:01 ATLAS.root_0
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:01 start_atlas.sh
[2025-11-26 08:47:38] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 19:01 input.tar.gz
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas 924634311 Nov 26 08:45 HITS.pool.root.1
[2025-11-26 08:47:38] -rw-------. 1 boincer umatlas   8499200 Nov 26 08:47 result.tar.gz
08:47:39 (1158141): run_atlas exited; CPU time 201285.823204
08:47:39 (1158141): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN