Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:00:45 (461005): wrapper (7.7.26015): starting
21:00:45 (461005): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:00:45] Arguments: --nthreads 8
[2025-11-25 21:00:45] Threads: 8
[2025-11-25 21:00:45] Checking for CVMFS
[2025-11-25 21:00:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:00:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:00:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:00:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:00:48] 2.13.3.0 10954 29421 384848 153304 2 387 25239744 32935937 23013 16776704 26 130308754 99.458 192927146 39572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:00:48] CVMFS is ok
[2025-11-25 21:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:00:48] Further information can be found at the LHC@home message board.
[2025-11-25 21:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:00:48] Checking for apptainer binary...
[2025-11-25 21:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:00:48] Running /usr/bin/apptainer --version
[2025-11-25 21:00:48] apptainer version 1.4.4-1.el9
[2025-11-25 21:00:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:00:49] c7-11-13.aglt2.org
[2025-11-25 21:00:49] apptainer works
[2025-11-25 21:00:50] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:00:50] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:00:50] Starting ATLAS job with PandaID=6896450394
[2025-11-25 21:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:23:13]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:23:13] 2025-11-27 03:22:20,089 | INFO     | chi2: 19.7614921261314
[2025-11-26 22:23:13] 2025-11-27 03:22:20,090 | INFO     | sum of square deviations: 1017424271778.6924
[2025-11-26 22:23:13] 2025-11-27 03:22:20,184 | INFO     | sum of deviations: 8613711797952.913
[2025-11-26 22:23:13] 2025-11-27 03:22:20,184 | INFO     | mean x: 1764168065.370794
[2025-11-26 22:23:13] 2025-11-27 03:22:20,184 | INFO     | mean y: 2870968.48654105
[2025-11-26 22:23:13] 2025-11-27 03:22:20,184 | INFO     | intersect: -14932919045.33925
[2025-11-26 22:23:13] 2025-11-27 03:22:20,186 | INFO     | chi2: 17.225169083901704
[2025-11-26 22:23:13] 2025-11-27 03:22:20,186 | INFO     | current chi2=17.225169083901704 (change=12.83467374852639 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,186 | INFO     | right removable region: 1485
[2025-11-26 22:23:13] 2025-11-27 03:22:20,187 | INFO     | sum of square deviations: 1017422575978.6921
[2025-11-26 22:23:13] 2025-11-27 03:22:20,281 | INFO     | sum of deviations: 7526454805644.834
[2025-11-26 22:23:13] 2025-11-27 03:22:20,281 | INFO     | mean x: 1764168370.370794
[2025-11-26 22:23:13] 2025-11-27 03:22:20,281 | INFO     | mean y: 2874072.2960969047
[2025-11-26 22:23:13] 2025-11-27 03:22:20,281 | INFO     | intersect: -13047685078.478987
[2025-11-26 22:23:13] 2025-11-27 03:22:20,283 | INFO     | chi2: 14.572466913300612
[2025-11-26 22:23:13] 2025-11-27 03:22:20,283 | INFO     | current chi2=14.572466913300612 (change=26.258266226613202 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,288 | INFO     | sum of square deviations: 1007185377993.6346
[2025-11-26 22:23:13] 2025-11-27 03:22:20,404 | INFO     | sum of deviations: 6938500398121.973
[2025-11-26 22:23:13] 2025-11-27 03:22:20,405 | INFO     | mean x: 1764168522.87711
[2025-11-26 22:23:13] 2025-11-27 03:22:20,405 | INFO     | mean y: 2882830.7690749494
[2025-11-26 22:23:13] 2025-11-27 03:22:20,405 | INFO     | intersect: -12150474699.818943
[2025-11-26 22:23:13] 2025-11-27 03:22:20,406 | INFO     | chi2: 10.477119691691229
[2025-11-26 22:23:13] 2025-11-27 03:22:20,406 | INFO     | current chi2=10.477119691691229 (change=28.103321462143583 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,416 | INFO     | sum of square deviations: 997017065020.9548
[2025-11-26 22:23:13] 2025-11-27 03:22:20,553 | INFO     | sum of deviations: 6401254979667.587
[2025-11-26 22:23:13] 2025-11-27 03:22:20,553 | INFO     | mean x: 1764168675.3834689
[2025-11-26 22:23:13] 2025-11-27 03:22:20,553 | INFO     | mean y: 2890888.0325203254
[2025-11-26 22:23:13] 2025-11-27 03:22:20,553 | INFO     | intersect: -11323789381.01047
[2025-11-26 22:23:13] 2025-11-27 03:22:20,567 | INFO     | chi2: 7.1825116804326505
[2025-11-26 22:23:13] 2025-11-27 03:22:20,567 | INFO     | current chi2=7.1825116804326505 (change=31.44574184707781 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,568 | INFO     | sum of square deviations: 986917404498.1581
[2025-11-26 22:23:13] 2025-11-27 03:22:20,749 | INFO     | sum of deviations: 5911667560879.251
[2025-11-26 22:23:13] 2025-11-27 03:22:20,749 | INFO     | mean x: 1764168827.889871
[2025-11-26 22:23:13] 2025-11-27 03:22:20,749 | INFO     | mean y: 2898281.5139360977
[2025-11-26 22:23:13] 2025-11-27 03:22:20,763 | INFO     | intersect: -10564530749.747396
[2025-11-26 22:23:13] 2025-11-27 03:22:20,764 | INFO     | chi2: 4.517447112123563
[2025-11-26 22:23:13] 2025-11-27 03:22:20,764 | INFO     | current chi2=4.517447112123563 (change=37.104911023946336 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,766 | INFO     | sum of square deviations: 976886432326.1113
[2025-11-26 22:23:13] 2025-11-27 03:22:20,935 | INFO     | sum of deviations: 5600639870872.706
[2025-11-26 22:23:13] 2025-11-27 03:22:20,936 | INFO     | mean x: 1764168980.3942702
[2025-11-26 22:23:13] 2025-11-27 03:22:20,936 | INFO     | mean y: 2903006.798090041
[2025-11-26 22:23:13] 2025-11-27 03:22:20,936 | INFO     | intersect: -10111348561.85777
[2025-11-26 22:23:13] 2025-11-27 03:22:20,941 | INFO     | chi2: 3.4283206846243344
[2025-11-26 22:23:13] 2025-11-27 03:22:20,941 | INFO     | current chi2=3.4283206846243344 (change=24.109334331249126 %)
[2025-11-26 22:23:13] 2025-11-27 03:22:20,941 | INFO     | left removable region: 50
[2025-11-26 22:23:13] 2025-11-27 03:22:20,943 | INFO     | sum of square deviations: 916214655750.6235
[2025-11-26 22:23:13] 2025-11-27 03:22:21,033 | INFO     | sum of deviations: 5697362880762.882
[2025-11-26 22:23:13] 2025-11-27 03:22:21,035 | INFO     | mean x: 1764169559.8808362
[2025-11-26 22:23:13] 2025-11-27 03:22:21,035 | INFO     | mean y: 2916674.432055749
[2025-11-26 22:23:13] 2025-11-27 03:22:21,035 | INFO     | intersect: -10967344609.592407
[2025-11-26 22:23:13] 2025-11-27 03:22:21,036 | INFO     | chi2: 0.5493471807507959
[2025-11-26 22:23:13] 2025-11-27 03:22:21,036 | INFO     | current memory leak: 6.22 B/s (using 1435 data points, chi2=0.55)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,038 | INFO     | could have reported an average CPU frequency of 3284 MHz (53 samples)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | ..............................
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . Timing measurements:
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . get job = 0 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . initial setup = 3 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . payload setup = 78 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . stage-in = 0 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . payload execution = 90995 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . stage-out = 5 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | . log creation = 1 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,039 | INFO     | ..............................
[2025-11-26 22:23:13] 2025-11-27 03:22:21,094 | INFO     | time since job start (91197s) is within the limit (172800.0s)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,126 | INFO     | 
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | job summary report
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | --------------------------------------------------
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | PanDA job id: 6896450394
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | task id: 47556149
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | errors: (none)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | pilot state: finished 
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | transexitcode: 0
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | exeerrorcode: 0
[2025-11-26 22:23:13] 2025-11-27 03:22:21,127 | INFO     | exeerrordiag: 
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | exitcode: 0
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | exitmsg: OK
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | cpuconsumptiontime: 205307 s
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | nevents: 1000
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | neventsw: 0
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | pid: 481076
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | pgrp: 481076
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | corecount: 8
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | event service: False
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | sizes: {0: 2284088, 1: 2284343, 2: 2284343, 12: 2284371, 23: 2284399, 34: 2284427, 44: 2284845, 45: 2284873, 91078: 2352991, 91083: 2361985, 91085: 2362041, 91103:
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | --------------------------------------------------
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | 
[2025-11-26 22:23:13] 2025-11-27 03:22:21,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 22:23:13] 2025-11-27 03:22:21,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | job 6896450394 has completed (purged errors)
[2025-11-26 22:23:13] 2025-11-27 03:22:21,209 | INFO     | overall cleanup function is called
[2025-11-26 22:23:13] 2025-11-27 03:22:22,258 | INFO     | --- collectZombieJob: --- 10, [481076]
[2025-11-26 22:23:13] 2025-11-27 03:22:22,258 | INFO     | zombie collector waiting for pid 481076
[2025-11-26 22:23:13] 2025-11-27 03:22:22,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:23:13] 2025-11-27 03:22:22,258 | INFO     | collected zombie processes
[2025-11-26 22:23:13] 2025-11-27 03:22:22,258 | INFO     | will attempt to kill all subprocesses of pid=481076
[2025-11-26 22:23:13] 2025-11-27 03:22:22,916 | INFO     | process IDs to be killed: [481076] (in reverse order)
[2025-11-26 22:23:13] 2025-11-27 03:22:23,145 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:23:13] 2025-11-27 03:22:23,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:23:13] 2025-11-27 03:22:23,213 | INFO     | did not find any defunct processes belonging to 481076
[2025-11-26 22:23:13] 2025-11-27 03:22:23,247 | INFO     | did not find any defunct processes belonging to 481076
[2025-11-26 22:23:13] 2025-11-27 03:22:23,252 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:23:13] 2025-11-27 03:22:23,252 | INFO     | ready for new job
[2025-11-26 22:23:13] 2025-11-27 03:22:23,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:23:13] 2025-11-27 03:22:23,263 | INFO     | ***************************************
[2025-11-26 22:23:13] 2025-11-27 03:22:23,263 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:23:13] 2025-11-27 03:22:23,263 | INFO     | ***************************************
[2025-11-26 22:23:13] 2025-11-27 03:22:23,263 | INFO     | 
[2025-11-26 22:23:13] 2025-11-27 03:22:23,271 | INFO     | architecture information:
[2025-11-26 22:23:13] 2025-11-27 03:22:23,276 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:23:13] 2025-11-27 03:22:23,309 | INFO     | cat /etc/os-release:
[2025-11-26 22:23:13] NAME="CentOS Linux"
[2025-11-26 22:23:13] VERSION="7 (Core)"
[2025-11-26 22:23:13] ID="centos"
[2025-11-26 22:23:13] ID_LIKE="rhel fedora"
[2025-11-26 22:23:13] VERSION_ID="7"
[2025-11-26 22:23:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:23:13] ANSI_COLOR="0;31"
[2025-11-26 22:23:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:23:13] HOME_URL="https://www.centos.org/"
[2025-11-26 22:23:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:23:13] 
[2025-11-26 22:23:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:23:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:23:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:23:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:23:13] 
[2025-11-26 22:23:13] 2025-11-27 03:22:23,310 | INFO     | ***************************************
[2025-11-26 22:23:13] 2025-11-27 03:22:23,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 22:23:13] 2025-11-27 03:22:23,853 | INFO     | sufficient remaining disk space (91945435136 B)
[2025-11-26 22:23:13] 2025-11-27 03:22:23,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:23:13] 2025-11-27 03:22:23,853 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:23:13] 2025-11-27 03:22:23,853 | INFO     | update_server=False
[2025-11-26 22:23:13] 2025-11-27 03:22:23,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:23:13] 2025-11-27 03:22:23,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:23:13] 2025-11-27 03:22:23,856 | INFO     | aborting loop
[2025-11-26 22:23:13] 2025-11-27 03:22:24,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:23:13] 2025-11-27 03:22:24,860 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:24,862 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:24,892 | INFO     | all data control threads have been joined
[2025-11-26 22:23:13] 2025-11-27 03:22:24,990 | INFO     | all payload control threads have been joined
[2025-11-26 22:23:13] 2025-11-27 03:22:25,065 | INFO     | [job] validate thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,350 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,364 | INFO     | all job control threads have been joined
[2025-11-26 22:23:13] 2025-11-27 03:22:25,391 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,511 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,900 | INFO     | [data] control thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,910 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,934 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:25,995 | INFO     | [payload] control thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:26,070 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:26,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:23:13] 2025-11-27 03:22:26,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:26,370 | INFO     | [job] control thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:26,557 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:27,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:23:13] 2025-11-27 03:22:27,152 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:31,060 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:23:13] 2025-11-27 03:22:54,686 | INFO     | PID=464897 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 22:23:13] 2025-11-27 03:22:54,686 | INFO     | .. there are 33 such processes running
[2025-11-26 22:23:13] 2025-11-27 03:22:54,687 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:23:13] 2025-11-27 03:22:54,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:23:13] 2025-11-27 03:22:54,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:23:13] 2025-11-27 03:23:05,546 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:23:13] 2025-11-27 03:23:06,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623999629120)>', '<ExcThread(monitor, started 139623204382464)>']
[2025-11-26 22:23:13] 2025-11-27 03:23:07,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:23:13] 2025-11-27 03:23:07,760 | INFO     | [monitor] control thread has ended
[2025-11-26 22:23:13] 2025-11-27 03:23:12,006 | INFO     | all workflow threads have been joined
[2025-11-26 22:23:13] 2025-11-27 03:23:12,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:23:13] 2025-11-27 03:23:12,009 | INFO     | traces error code: 0
[2025-11-26 22:23:13] 2025-11-27 03:23:12,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:23:13] 2025-11-27 03:23:12,462 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:23:13] 2025-11-27 03:23:12,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:23:13] 2025-11-27 03:23:12,572 [wrapper] pilotpid: 464897
[2025-11-26 22:23:13] 2025-11-27 03:23:12,609 [wrapper] Pilot exit status: 0
[2025-11-26 22:23:13] 2025-11-27 03:23:12,656 [wrapper] pandaids: 6896450394
[2025-11-26 22:23:13] 2025-11-27 03:23:12,951 [wrapper] cleanup supervisor_pilot 1580891 464898
[2025-11-26 22:23:13] 2025-11-27 03:23:12,957 [wrapper] Test setup, not cleaning
[2025-11-26 22:23:13] 2025-11-27 03:23:12,960 [wrapper] apfmon messages muted
[2025-11-26 22:23:13] 2025-11-27 03:23:12,963 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:23:13] 2025-11-27 03:23:12,972 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:23:13]  *** Error codes and diagnostics ***
[2025-11-26 22:23:13]     "exeErrorCode": 0,
[2025-11-26 22:23:13]     "exeErrorDiag": "",
[2025-11-26 22:23:13]     "pilotErrorCode": 0,
[2025-11-26 22:23:13]     "pilotErrorDiag": "",
[2025-11-26 22:23:13]  *** Listing of results directory ***
[2025-11-26 22:23:13] total 1338308
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:36 queuedata.json
[2025-11-26 22:23:13] -rwx------. 1 boincer umatlas     36292 Nov 24 22:40 runpilot2-wrapper.sh
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:23:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:00 run_atlas
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:00 job.xml
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas 410352147 Nov 25 21:00 EVNT.47483658._001494.pool.root.1
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:00 start_atlas.sh
[2025-11-26 22:23:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:00 shared
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 21:00 input.tar.gz
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:00 boinc_lockfile
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 21:00 pandaJob.out
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas        57 Nov 25 21:00 setup.sh.local
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas    991877 Nov 25 21:02 agis_schedconf.cvmfs.json
[2025-11-26 22:23:13] drwx------. 5 boincer umatlas      4096 Nov 25 21:02 pilot3
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:13 boinc_task_state.xml
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas      6906 Nov 26 22:18 init_data.xml
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas 927311704 Nov 26 22:21 HITS.47556149._004802.pool.root.1
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas      1049 Nov 26 22:21 memory_monitor_summary.json
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas   2533302 Nov 26 22:22 log.47556149._004802.job.log.tgz.1
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas      8580 Nov 26 22:22 heartbeat.json
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas        95 Nov 26 22:22 pilot_heartbeat.json
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:23 wrapper_checkpoint.txt
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:23 boinc_mmap_file
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas      4823 Nov 26 22:23 pilotlog.txt
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas  11889350 Nov 26 22:23 log.47556149._004802.job.log.1
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas       353 Nov 26 22:23 output.list
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:23 runtime_log
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas  14438400 Nov 26 22:23 result.tar.gz
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 22:23 runtime_log.err
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas       662 Nov 26 22:23 mpoKDmc5yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN5LKDmvkxYJn.diag
[2025-11-26 22:23:13] -rw-r--r--. 1 boincer umatlas     21200 Nov 26 22:23 stderr.txt
[2025-11-26 22:23:13] HITS file was successfully produced:
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas 927311704 Nov 26 22:21 shared/HITS.pool.root.1
[2025-11-26 22:23:13]  *** Contents of shared directory: ***
[2025-11-26 22:23:13] total 1321020
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas 410352147 Nov 25 21:00 ATLAS.root_0
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:00 start_atlas.sh
[2025-11-26 22:23:13] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 21:00 input.tar.gz
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas 927311704 Nov 26 22:21 HITS.pool.root.1
[2025-11-26 22:23:13] -rw-------. 1 boincer umatlas  14438400 Nov 26 22:23 result.tar.gz
22:23:14 (461005): run_atlas exited; CPU time 205758.228449
22:23:14 (461005): called boinc_finish(0)

</stderr_txt>
]]>

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