Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:38:44 (1236715): wrapper (7.7.26015): starting
22:38:44 (1236715): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:38:44] Arguments: --nthreads 8
[2025-11-25 22:38:44] Threads: 8
[2025-11-25 22:38:44] Checking for CVMFS
[2025-11-25 22:38:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:38:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:38:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:38:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:38:46] 2.13.3.0 13122 29522 365492 153307 2 339 29162535 32935936 41035 16776704 0 146690836 99.570 163008857 36138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:38:46] CVMFS is ok
[2025-11-25 22:38:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:38:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:38:46] Further information can be found at the LHC@home message board.
[2025-11-25 22:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:38:46] Checking for apptainer binary...
[2025-11-25 22:38:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:38:46] Running /usr/bin/apptainer --version
[2025-11-25 22:38:46] apptainer version 1.4.4-1.el9
[2025-11-25 22:38:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:38:46] c6-8-25-2.aglt2.org
[2025-11-25 22:38:46] apptainer works
[2025-11-25 22:38:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:38:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:38:46] Starting ATLAS job with PandaID=6896450134
[2025-11-25 22:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:03:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:03:07] 2025-11-26 20:02:25,059 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:03:07] 2025-11-26 20:02:25,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:03:07] 2025-11-26 20:02:25,077 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:03:07] 2025-11-26 20:02:25,079 | INFO     | sum of square deviations: 279496710876.68823
[2025-11-26 15:03:07] 2025-11-26 20:02:25,097 | INFO     | sum of deviations: 1133545568551.2173
[2025-11-26 15:03:07] 2025-11-26 20:02:25,097 | INFO     | mean x: 1764157847.4710145
[2025-11-26 15:03:07] 2025-11-26 20:02:25,097 | INFO     | mean y: 2882962.614906832
[2025-11-26 15:03:07] 2025-11-26 20:02:25,098 | INFO     | intersect: -7151953686.278247
[2025-11-26 15:03:07] 2025-11-26 20:02:25,099 | INFO     | chi2: 8.875670935686218
[2025-11-26 15:03:07] 2025-11-26 20:02:25,100 | INFO     | sum of square deviations: 275179672664.8238
[2025-11-26 15:03:07] 2025-11-26 20:02:25,118 | INFO     | sum of deviations: 1460295940269.455
[2025-11-26 15:03:07] 2025-11-26 20:02:25,118 | INFO     | mean x: 1764157694.9864724
[2025-11-26 15:03:07] 2025-11-26 20:02:25,118 | INFO     | mean y: 2894502.650364204
[2025-11-26 15:03:07] 2025-11-26 20:02:25,118 | INFO     | intersect: -9358960953.590899
[2025-11-26 15:03:07] 2025-11-26 20:02:25,120 | INFO     | chi2: 5.667170758633397
[2025-11-26 15:03:07] 2025-11-26 20:02:25,120 | INFO     | current chi2=5.667170758633397 (change=36.149381836053365 %)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,121 | INFO     | sum of square deviations: 270907332964.9957
[2025-11-26 15:03:07] 2025-11-26 20:02:25,139 | INFO     | sum of deviations: 1744783586834.1816
[2025-11-26 15:03:07] 2025-11-26 20:02:25,139 | INFO     | mean x: 1764157542.5020921
[2025-11-26 15:03:07] 2025-11-26 20:02:25,139 | INFO     | mean y: 2904646.910041841
[2025-11-26 15:03:07] 2025-11-26 20:02:25,139 | INFO     | intersect: -11359183972.31939
[2025-11-26 15:03:07] 2025-11-26 20:02:25,141 | INFO     | chi2: 2.9789588271026752
[2025-11-26 15:03:07] 2025-11-26 20:02:25,141 | INFO     | current chi2=2.9789588271026752 (change=47.4348144077975 %)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,142 | INFO     | sum of square deviations: 266679051395.8934
[2025-11-26 15:03:07] 2025-11-26 20:02:25,160 | INFO     | sum of deviations: 1817102894738.5044
[2025-11-26 15:03:07] 2025-11-26 20:02:25,160 | INFO     | mean x: 1764157390.0105152
[2025-11-26 15:03:07] 2025-11-26 20:02:25,160 | INFO     | mean y: 2907251.8496319666
[2025-11-26 15:03:07] 2025-11-26 20:02:25,160 | INFO     | intersect: -12017742601.908606
[2025-11-26 15:03:07] 2025-11-26 20:02:25,162 | INFO     | chi2: 2.7111872453239516
[2025-11-26 15:03:07] 2025-11-26 20:02:25,162 | INFO     | current chi2=2.7111872453239516 (change=8.988764105852288 %)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,162 | INFO     | right removable region: 950
[2025-11-26 15:03:07] 2025-11-26 20:02:25,163 | INFO     | sum of square deviations: 275177921964.8239
[2025-11-26 15:03:07] 2025-11-26 20:02:25,182 | INFO     | sum of deviations: 834989529274.2927
[2025-11-26 15:03:07] 2025-11-26 20:02:25,182 | INFO     | mean x: 1764157999.9864724
[2025-11-26 15:03:07] 2025-11-26 20:02:25,182 | INFO     | mean y: 2893498.5608740896
[2025-11-26 15:03:07] 2025-11-26 20:02:25,182 | INFO     | intersect: -5350201137.288884
[2025-11-26 15:03:07] 2025-11-26 20:02:25,183 | INFO     | chi2: 6.3651956919194825
[2025-11-26 15:03:07] 2025-11-26 20:02:25,184 | INFO     | current chi2=6.3651956919194825 (change=28.284906706860006 %)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,185 | INFO     | sum of square deviations: 270904124814.99026
[2025-11-26 15:03:07] 2025-11-26 20:02:25,203 | INFO     | sum of deviations: 773834268041.61
[2025-11-26 15:03:07] 2025-11-26 20:02:25,203 | INFO     | mean x: 1764158152.496862
[2025-11-26 15:03:07] 2025-11-26 20:02:25,203 | INFO     | mean y: 2895680.2029288705
[2025-11-26 15:03:07] 2025-11-26 20:02:25,203 | INFO     | intersect: -5036400172.451094
[2025-11-26 15:03:07] 2025-11-26 20:02:25,204 | INFO     | chi2: 6.308573315481177
[2025-11-26 15:03:07] 2025-11-26 20:02:25,205 | INFO     | current chi2=6.308573315481177 (change=0.8895622252460612 %)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,205 | INFO     | left removable region: 20
[2025-11-26 15:03:07] 2025-11-26 20:02:25,206 | INFO     | sum of square deviations: 249396573233.703
[2025-11-26 15:03:07] 2025-11-26 20:02:25,223 | INFO     | sum of deviations: 1398191984657.5032
[2025-11-26 15:03:07] 2025-11-26 20:02:25,223 | INFO     | mean x: 1764157969.5548387
[2025-11-26 15:03:07] 2025-11-26 20:02:25,223 | INFO     | mean y: 2923118.421505376
[2025-11-26 15:03:07] 2025-11-26 20:02:25,224 | INFO     | intersect: -9887475537.496735
[2025-11-26 15:03:07] 2025-11-26 20:02:25,225 | INFO     | chi2: 0.07459396462064068
[2025-11-26 15:03:07] 2025-11-26 20:02:25,225 | INFO     | current memory leak: 5.61 B/s (using 930 data points, chi2=0.07)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,226 | INFO     | could have reported an average CPU frequency of 2687 MHz (36 samples)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,226 | INFO     | ..............................
[2025-11-26 15:03:07] 2025-11-26 20:02:25,226 | INFO     | . Timing measurements:
[2025-11-26 15:03:07] 2025-11-26 20:02:25,226 | INFO     | . get job = 0 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,226 | INFO     | . initial setup = 3 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | . payload setup = 15 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | . stage-in = 0 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | . payload execution = 58909 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | . stage-out = 7 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | . log creation = 0 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,227 | INFO     | ..............................
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | 
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | job summary report
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | --------------------------------------------------
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | PanDA job id: 6896450134
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | task id: 47556161
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | errors: (none)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | pilot state: finished 
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | transexitcode: 0
[2025-11-26 15:03:07] 2025-11-26 20:02:25,325 | INFO     | exeerrorcode: 0
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | exeerrordiag: 
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | exitcode: 0
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | exitmsg: OK
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | cpuconsumptiontime: 258211 s
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | nevents: 1000
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | neventsw: 0
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | pid: 1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:25,328 | INFO     | pgrp: 1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | corecount: 8
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | event service: False
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | sizes: {0: 2284211, 11: 2284211, 14: 2284501, 22: 2284529, 58929: 2336023, 58939: 2345017, 58940: 2345201, 58960: 2345447}
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | --------------------------------------------------
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | 
[2025-11-26 15:03:07] 2025-11-26 20:02:25,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:03:07] 2025-11-26 20:02:25,527 | INFO     | job 6896450134 has completed (purged errors)
[2025-11-26 15:03:07] 2025-11-26 20:02:25,527 | INFO     | overall cleanup function is called
[2025-11-26 15:03:07] 2025-11-26 20:02:26,574 | INFO     | --- collectZombieJob: --- 10, [1256981]
[2025-11-26 15:03:07] 2025-11-26 20:02:26,575 | INFO     | zombie collector waiting for pid 1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:26,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:03:07] 2025-11-26 20:02:26,575 | INFO     | collected zombie processes
[2025-11-26 15:03:07] 2025-11-26 20:02:26,575 | INFO     | will attempt to kill all subprocesses of pid=1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:27,748 | INFO     | process IDs to be killed: [1256981] (in reverse order)
[2025-11-26 15:03:07] 2025-11-26 20:02:28,001 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:03:07] 2025-11-26 20:02:28,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:03:07] 2025-11-26 20:02:28,046 | INFO     | did not find any defunct processes belonging to 1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:28,080 | INFO     | did not find any defunct processes belonging to 1256981
[2025-11-26 15:03:07] 2025-11-26 20:02:28,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:03:07] 2025-11-26 20:02:28,083 | INFO     | ready for new job
[2025-11-26 15:03:07] 2025-11-26 20:02:28,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:03:07] 2025-11-26 20:02:28,088 | INFO     | ***************************************
[2025-11-26 15:03:07] 2025-11-26 20:02:28,088 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:03:07] 2025-11-26 20:02:28,088 | INFO     | ***************************************
[2025-11-26 15:03:07] 2025-11-26 20:02:28,088 | INFO     | 
[2025-11-26 15:03:07] 2025-11-26 20:02:28,094 | INFO     | architecture information:
[2025-11-26 15:03:07] 2025-11-26 20:02:28,094 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:03:07] 2025-11-26 20:02:28,147 | INFO     | cat /etc/os-release:
[2025-11-26 15:03:07] NAME="CentOS Linux"
[2025-11-26 15:03:07] VERSION="7 (Core)"
[2025-11-26 15:03:07] ID="centos"
[2025-11-26 15:03:07] ID_LIKE="rhel fedora"
[2025-11-26 15:03:07] VERSION_ID="7"
[2025-11-26 15:03:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:03:07] ANSI_COLOR="0;31"
[2025-11-26 15:03:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:03:07] HOME_URL="https://www.centos.org/"
[2025-11-26 15:03:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:03:07] 
[2025-11-26 15:03:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:03:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:03:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:03:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:03:07] 
[2025-11-26 15:03:07] 2025-11-26 20:02:28,147 | INFO     | ***************************************
[2025-11-26 15:03:07] 2025-11-26 20:02:28,651 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 15:03:07] 2025-11-26 20:02:28,729 | INFO     | sufficient remaining disk space (62303240192 B)
[2025-11-26 15:03:07] 2025-11-26 20:02:28,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:03:07] 2025-11-26 20:02:28,730 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:03:07] 2025-11-26 20:02:28,730 | INFO     | update_server=False
[2025-11-26 15:03:07] 2025-11-26 20:02:28,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:03:07] 2025-11-26 20:02:28,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:03:07] 2025-11-26 20:02:28,731 | INFO     | aborting loop
[2025-11-26 15:03:07] 2025-11-26 20:02:29,050 | INFO     | all payload control threads have been joined
[2025-11-26 15:03:07] 2025-11-26 20:02:29,063 | INFO     | all data control threads have been joined
[2025-11-26 15:03:07] 2025-11-26 20:02:29,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:03:07] 2025-11-26 20:02:29,360 | INFO     | all job control threads have been joined
[2025-11-26 15:03:07] 2025-11-26 20:02:29,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:03:07] 2025-11-26 20:02:29,736 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:29,737 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:29,917 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,056 | INFO     | [payload] control thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,070 | INFO     | [data] control thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,106 | INFO     | [job] validate thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:03:07] 2025-11-26 20:02:30,366 | INFO     | [job] control thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:30,983 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,016 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,018 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,061 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,062 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,359 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:31,365 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:33,388 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:03:07] 2025-11-26 20:02:58,271 | INFO     | PID=1242258 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:03:07] 2025-11-26 20:02:58,271 | INFO     | .. there are 63 such processes running
[2025-11-26 15:03:07] 2025-11-26 20:02:58,271 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:03:07] 2025-11-26 20:02:58,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:03:07] 2025-11-26 20:02:58,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:03:07] 2025-11-26 20:02:59,027 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:03:07] 2025-11-26 20:03:00,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658016053056)>', '<ExcThread(monitor, started 139657169860352)>']
[2025-11-26 15:03:07] 2025-11-26 20:03:01,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:03:07] 2025-11-26 20:03:01,290 | INFO     | [monitor] control thread has ended
[2025-11-26 15:03:07] 2025-11-26 20:03:06,011 | INFO     | all workflow threads have been joined
[2025-11-26 15:03:07] 2025-11-26 20:03:06,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:03:07] 2025-11-26 20:03:06,012 | INFO     | traces error code: 0
[2025-11-26 15:03:07] 2025-11-26 20:03:06,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:03:07] 2025-11-26 20:03:06,564 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:03:07] 2025-11-26 20:03:06,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:03:07] 2025-11-26 20:03:06,611 [wrapper] pilotpid: 1242258
[2025-11-26 15:03:07] 2025-11-26 20:03:06,633 [wrapper] Pilot exit status: 0
[2025-11-26 15:03:07] 2025-11-26 20:03:06,735 [wrapper] pandaids: 6896450134
[2025-11-26 15:03:07] 2025-11-26 20:03:06,902 [wrapper] cleanup supervisor_pilot 2295373 1242259
[2025-11-26 15:03:07] 2025-11-26 20:03:06,904 [wrapper] Test setup, not cleaning
[2025-11-26 15:03:07] 2025-11-26 20:03:06,942 [wrapper] apfmon messages muted
[2025-11-26 15:03:07] 2025-11-26 20:03:06,960 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:03:07] 2025-11-26 20:03:06,975 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:03:07]  *** Error codes and diagnostics ***
[2025-11-26 15:03:07]     "exeErrorCode": 0,
[2025-11-26 15:03:07]     "exeErrorDiag": "",
[2025-11-26 15:03:07]     "pilotErrorCode": 0,
[2025-11-26 15:03:07]     "pilotErrorDiag": "",
[2025-11-26 15:03:07]  *** Listing of results directory ***
[2025-11-26 15:03:07] total 1334860
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 15:03:07] -rwx------. 1 boincer umatlas     36292 Nov 24 22:35 runpilot2-wrapper.sh
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:35 queuedata.json
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:03:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:38 run_atlas
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:38 job.xml
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas 411118768 Nov 25 22:38 EVNT.47483658._002077.pool.root.1
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:38 start_atlas.sh
[2025-11-26 15:03:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:38 shared
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 22:38 input.tar.gz
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:38 boinc_lockfile
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 22:38 pandaJob.out
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas        57 Nov 25 22:38 setup.sh.local
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas    991877 Nov 25 22:39 agis_schedconf.cvmfs.json
[2025-11-26 15:03:07] drwx------. 5 boincer umatlas      4096 Nov 25 22:39 pilot3
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:44 boinc_task_state.xml
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas      6878 Nov 26 14:57 init_data.xml
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas 933386655 Nov 26 15:01 HITS.47556161._000607.pool.root.1
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas      1059 Nov 26 15:01 memory_monitor_summary.json
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas   2083228 Nov 26 15:02 log.47556161._000607.job.log.tgz.1
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas        95 Nov 26 15:02 pilot_heartbeat.json
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas      8621 Nov 26 15:02 heartbeat.json
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas        29 Nov 26 15:03 wrapper_checkpoint.txt
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas      4824 Nov 26 15:03 pilotlog.txt
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:03 boinc_mmap_file
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas   7150423 Nov 26 15:03 log.47556161._000607.job.log.1
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas       353 Nov 26 15:03 output.list
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:03 runtime_log
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas   9256960 Nov 26 15:03 result.tar.gz
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 15:03 runtime_log.err
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas       661 Nov 26 15:03 j3dMDmU1yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL5LKDmo1iYan.diag
[2025-11-26 15:03:07] -rw-r--r--. 1 boincer umatlas     21134 Nov 26 15:03 stderr.txt
[2025-11-26 15:03:07] HITS file was successfully produced:
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas 933386655 Nov 26 15:01 shared/HITS.pool.root.1
[2025-11-26 15:03:07]  *** Contents of shared directory: ***
[2025-11-26 15:03:07] total 1322640
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas 411118768 Nov 25 22:38 ATLAS.root_0
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:38 start_atlas.sh
[2025-11-26 15:03:07] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 22:38 input.tar.gz
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas 933386655 Nov 26 15:01 HITS.pool.root.1
[2025-11-26 15:03:07] -rw-------. 1 boincer umatlas   9256960 Nov 26 15:03 result.tar.gz
15:03:09 (1236715): run_atlas exited; CPU time 260950.100503
15:03:09 (1236715): called boinc_finish(0)

</stderr_txt>
]]>

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