Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:56 (10642): wrapper (7.7.26015): starting
05:13:56 (10642): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 05:13:56] Arguments: --nthreads 8
[2025-11-28 05:13:56] Threads: 8
[2025-11-28 05:13:56] Checking for CVMFS
[2025-11-28 05:13:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 05:13:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 05:13:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 05:13:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 05:13:59] 2.11.2.0 19320 81150 87652 153396 0 62 13822500 25165825 1288 130560 11 26490588 99.888 16025947 1557 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 05:13:59] CVMFS is ok
[2025-11-28 05:13:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 05:13:59] Checking for apptainer binary...
[2025-11-28 05:13:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 05:13:59] Running /usr/bin/apptainer --version
[2025-11-28 05:13:59] apptainer version 1.3.2-1.el7
[2025-11-28 05:13:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 05:14:20] cg-vwn360.simple-grid.lan
[2025-11-28 05:14:20] apptainer works
[2025-11-28 05:14:20] Set ATHENA_PROC_NUMBER=8
[2025-11-28 05:14:20] Set ATHENA_CORE_NUMBER=8
[2025-11-28 05:14:20] Starting ATLAS job with PandaID=6896450432
[2025-11-28 05:14:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 04:56:44]  *** The last 200 lines of the pilot log: ***
[2025-11-29 04:56:44] 2025-11-29 03:55:52,516 | INFO     | time since job start (85067s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:55:53,733 | INFO     | monitor loop #5749: job 0:6896450432 is in state 'finished'
[2025-11-29 04:56:44] 2025-11-29 03:55:53,734 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:56:44] 2025-11-29 03:55:54,521 | INFO     | time since job start (85069s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:55:56,238 | INFO     | monitor loop #5750: job 0:6896450432 is in state 'finished'
[2025-11-29 04:56:44] 2025-11-29 03:55:56,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:56:44] 2025-11-29 03:55:56,528 | INFO     | time since job start (85071s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:55:58,534 | INFO     | time since job start (85073s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:55:58,743 | INFO     | monitor loop #5751: job 0:6896450432 is in state 'finished'
[2025-11-29 04:56:44] 2025-11-29 03:55:58,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:56:44] 2025-11-29 03:56:00,544 | INFO     | time since job start (85075s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:56:01,248 | INFO     | monitor loop #5752: job 0:6896450432 is in state 'finished'
[2025-11-29 04:56:44] 2025-11-29 03:56:01,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 04:56:44] 2025-11-29 03:56:01,851 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 04:56:44] 2025-11-29 03:56:01,853 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 04:56:44] 2025-11-29 03:56:01,856 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6896450432/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 04:56:44] 2025-11-29 03:56:01,857 | INFO     | extracted standard info from prmon json
[2025-11-29 04:56:44] 2025-11-29 03:56:01,857 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 04:56:44] 2025-11-29 03:56:01,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 04:56:44] 2025-11-29 03:56:01,899 | INFO     | fitting pss+swap vs Time
[2025-11-29 04:56:44] 2025-11-29 03:56:01,901 | INFO     | sum of square deviations: 823812874283.635
[2025-11-29 04:56:44] 2025-11-29 03:56:01,981 | INFO     | sum of deviations: 3394136923463.0693
[2025-11-29 04:56:44] 2025-11-29 03:56:01,981 | INFO     | mean x: 1764346211.127076
[2025-11-29 04:56:44] 2025-11-29 03:56:01,982 | INFO     | mean y: 2850235.9314079424
[2025-11-29 04:56:44] 2025-11-29 03:56:01,982 | INFO     | intersect: -7266315867.0697775
[2025-11-29 04:56:44] 2025-11-29 03:56:01,984 | INFO     | chi2: 18.718486886218606
[2025-11-29 04:56:44] 2025-11-29 03:56:01,986 | INFO     | sum of square deviations: 814923379047.2603
[2025-11-29 04:56:44] 2025-11-29 03:56:02,054 | INFO     | sum of deviations: 3857614006210.018
[2025-11-29 04:56:44] 2025-11-29 03:56:02,054 | INFO     | mean x: 1764346058.6311593
[2025-11-29 04:56:44] 2025-11-29 03:56:02,054 | INFO     | mean y: 2858186.19057971
[2025-11-29 04:56:44] 2025-11-29 03:56:02,054 | INFO     | intersect: -8349051014.812095
[2025-11-29 04:56:44] 2025-11-29 03:56:02,056 | INFO     | chi2: 15.515888388999294
[2025-11-29 04:56:44] 2025-11-29 03:56:02,056 | INFO     | current chi2=15.515888388999294 (change=17.10928087663544 %)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,056 | INFO     | right removable region: 1379
[2025-11-29 04:56:44] 2025-11-29 03:56:02,058 | INFO     | sum of square deviations: 814922426837.26
[2025-11-29 04:56:44] 2025-11-29 03:56:02,109 | INFO     | sum of deviations: 2828728660202.487
[2025-11-29 04:56:44] 2025-11-29 03:56:02,110 | INFO     | mean x: 1764346363.6311593
[2025-11-29 04:56:44] 2025-11-29 03:56:02,110 | INFO     | mean y: 2859933.7514492753
[2025-11-29 04:56:44] 2025-11-29 03:56:02,110 | INFO     | intersect: -6121474065.371847
[2025-11-29 04:56:44] 2025-11-29 03:56:02,112 | INFO     | chi2: 14.276050838234442
[2025-11-29 04:56:44] 2025-11-29 03:56:02,112 | INFO     | current chi2=14.276050838234442 (change=23.732880093288344 %)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,112 | INFO     | left removable region: 10
[2025-11-29 04:56:44] 2025-11-29 03:56:02,114 | INFO     | sum of square deviations: 795590196779.0725
[2025-11-29 04:56:44] 2025-11-29 03:56:02,168 | INFO     | sum of deviations: 2911764480436.035
[2025-11-29 04:56:44] 2025-11-29 03:56:02,168 | INFO     | mean x: 1764346333.1402483
[2025-11-29 04:56:44] 2025-11-29 03:56:02,168 | INFO     | mean y: 2878109.088385683
[2025-11-29 04:56:44] 2025-11-29 03:56:02,168 | INFO     | intersect: -6454417373.967865
[2025-11-29 04:56:44] 2025-11-29 03:56:02,170 | INFO     | chi2: 7.152374188627526
[2025-11-29 04:56:44] 2025-11-29 03:56:02,170 | INFO     | current memory leak: 3.66 B/s (using 1369 data points, chi2=7.15)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | ..............................
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | . Timing measurements:
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | . get job = 0 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | . initial setup = 9 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,172 | INFO     | . payload setup = 164 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,173 | INFO     | . stage-in = 0 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,173 | INFO     | . payload execution = 84619 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,173 | INFO     | . stage-out = 5 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,173 | INFO     | . log creation = 2 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,173 | INFO     | ..............................
[2025-11-29 04:56:44] 2025-11-29 03:56:02,295 | INFO     | 
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | job summary report
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | --------------------------------------------------
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | PanDA job id: 6896450432
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | task id: 47556149
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | errors: (none)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | pilot state: finished 
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | transexitcode: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | exeerrorcode: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | exeerrordiag: 
[2025-11-29 04:56:44] 2025-11-29 03:56:02,296 | INFO     | exitcode: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | exitmsg: OK
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | cpuconsumptiontime: 316431 s
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | nevents: 1000
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | neventsw: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | pid: 21064
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | pgrp: 21064
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | corecount: 8
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | event service: False
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | sizes: {0: 2284087, 1: 2284342, 12: 2284342, 23: 2284370, 34: 2284398, 44: 2284426, 55: 2284582, 66: 2284610, 76: 2284638, 87: 2284694, 95: 2284984, 98: 2285292, 8
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | --------------------------------------------------
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | 
[2025-11-29 04:56:44] 2025-11-29 03:56:02,297 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-29 04:56:44] 2025-11-29 03:56:02,556 | INFO     | time since job start (85077s) is within the limit (172800.0s)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | job 6896450432 has completed (purged errors)
[2025-11-29 04:56:44] 2025-11-29 03:56:02,871 | INFO     | overall cleanup function is called
[2025-11-29 04:56:44] 2025-11-29 03:56:03,890 | INFO     | --- collectZombieJob: --- 10, [21064]
[2025-11-29 04:56:44] 2025-11-29 03:56:03,891 | INFO     | zombie collector waiting for pid 21064
[2025-11-29 04:56:44] 2025-11-29 03:56:03,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 04:56:44] 2025-11-29 03:56:03,891 | INFO     | collected zombie processes
[2025-11-29 04:56:44] 2025-11-29 03:56:03,891 | INFO     | will attempt to kill all subprocesses of pid=21064
[2025-11-29 04:56:44] 2025-11-29 03:56:04,017 | INFO     | process IDs to be killed: [21064] (in reverse order)
[2025-11-29 04:56:44] 2025-11-29 03:56:04,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 04:56:44] 2025-11-29 03:56:04,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 04:56:44] 2025-11-29 03:56:04,694 | INFO     | did not find any defunct processes belonging to 21064
[2025-11-29 04:56:44] 2025-11-29 03:56:04,696 | INFO     | did not find any defunct processes belonging to 21064
[2025-11-29 04:56:44] 2025-11-29 03:56:04,747 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 04:56:44] 2025-11-29 03:56:04,747 | INFO     | ready for new job
[2025-11-29 04:56:44] 2025-11-29 03:56:04,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 04:56:44] 2025-11-29 03:56:04,752 | INFO     | ***************************************
[2025-11-29 04:56:44] 2025-11-29 03:56:04,752 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 04:56:44] 2025-11-29 03:56:04,752 | INFO     | ***************************************
[2025-11-29 04:56:44] 2025-11-29 03:56:04,752 | INFO     | 
[2025-11-29 04:56:44] 2025-11-29 03:56:04,753 | INFO     | pilot is running in a VM
[2025-11-29 04:56:44] 2025-11-29 03:56:04,753 | INFO     | architecture information:
[2025-11-29 04:56:44] 2025-11-29 03:56:04,760 | INFO     | executing command: cat /etc/os-release
[2025-11-29 04:56:44] 2025-11-29 03:56:05,021 | INFO     | cat /etc/os-release:
[2025-11-29 04:56:44] NAME="CentOS Linux"
[2025-11-29 04:56:44] VERSION="7 (Core)"
[2025-11-29 04:56:44] ID="centos"
[2025-11-29 04:56:44] ID_LIKE="rhel fedora"
[2025-11-29 04:56:44] VERSION_ID="7"
[2025-11-29 04:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 04:56:44] ANSI_COLOR="0;31"
[2025-11-29 04:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 04:56:44] HOME_URL="https://www.centos.org/"
[2025-11-29 04:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 04:56:44] 
[2025-11-29 04:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 04:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 04:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 04:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 04:56:44] 
[2025-11-29 04:56:44] 2025-11-29 03:56:05,021 | INFO     | ***************************************
[2025-11-29 04:56:44] 2025-11-29 03:56:05,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-29 04:56:44] 2025-11-29 03:56:05,793 | INFO     | sufficient remaining disk space (488209645568 B)
[2025-11-29 04:56:44] 2025-11-29 03:56:05,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 04:56:44] 2025-11-29 03:56:05,794 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 04:56:44] 2025-11-29 03:56:05,794 | INFO     | update_server=False
[2025-11-29 04:56:44] 2025-11-29 03:56:05,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 04:56:44] 2025-11-29 03:56:05,991 | INFO     | all payload control threads have been joined
[2025-11-29 04:56:44] 2025-11-29 03:56:06,196 | INFO     | all job control threads have been joined
[2025-11-29 04:56:44] 2025-11-29 03:56:06,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 04:56:44] 2025-11-29 03:56:06,238 | INFO     | all data control threads have been joined
[2025-11-29 04:56:44] 2025-11-29 03:56:06,286 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 04:56:44] 2025-11-29 03:56:06,287 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 04:56:44] 2025-11-29 03:56:06,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 04:56:44] 2025-11-29 03:56:06,287 | INFO     | will abort loop
[2025-11-29 04:56:44] 2025-11-29 03:56:06,800 | INFO     | [job] retrieve thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:06,854 | INFO     | [payload] validate_post thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:06,996 | INFO     | [payload] control thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 04:56:44] 2025-11-29 03:56:07,173 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,202 | INFO     | [job] control thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,228 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,244 | INFO     | [data] control thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,248 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,291 | INFO     | [job] job monitor thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 04:56:44] 2025-11-29 03:56:07,326 | INFO     | [job] validate thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,330 | INFO     | [data] copytool_in thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:07,968 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:08,006 | INFO     | [payload] failed_post thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:08,231 | INFO     | [data] copytool_out thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:08,320 | INFO     | [job] queue monitor thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:11,077 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 04:56:44] 2025-11-29 03:56:33,454 | INFO     | [monitor] cgroup control has ended
[2025-11-29 04:56:44] 2025-11-29 03:56:34,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819636234048)>', '<ExcThread(monitor, started 139818902222592)>']
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | INFO     | PID=14441 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | INFO     | .. there are 9 such processes running
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 04:56:44] 2025-11-29 03:56:35,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 04:56:44] 2025-11-29 03:56:35,690 | INFO     | [monitor] control thread has ended
[2025-11-29 04:56:44] 2025-11-29 03:56:39,452 | INFO     | all workflow threads have been joined
[2025-11-29 04:56:44] 2025-11-29 03:56:39,453 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 04:56:44] 2025-11-29 03:56:39,453 | INFO     | traces error code: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:39,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 04:56:44] 2025-11-29 03:56:39,739 [wrapper] ==== pilot stdout END ====
[2025-11-29 04:56:44] 2025-11-29 03:56:39,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 04:56:44] 2025-11-29 03:56:39,941 [wrapper] pilotpid: 14441
[2025-11-29 04:56:44] 2025-11-29 03:56:40,041 [wrapper] Pilot exit status: 0
[2025-11-29 04:56:44] 2025-11-29 03:56:40,371 [wrapper] pandaids: 6896450432
[2025-11-29 04:56:44] 2025-11-29 03:56:40,873 [wrapper] cleanup supervisor_pilot 22167 14442
[2025-11-29 04:56:44] 2025-11-29 03:56:40,965 [wrapper] Test setup, not cleaning
[2025-11-29 04:56:44] 2025-11-29 03:56:41,071 [wrapper] apfmon messages muted
[2025-11-29 04:56:44] 2025-11-29 03:56:41,140 [wrapper] ==== wrapper stdout END ====
[2025-11-29 04:56:44] 2025-11-29 03:56:41,241 [wrapper] ==== wrapper stderr END ====
[2025-11-29 04:56:44]  *** Error codes and diagnostics ***
[2025-11-29 04:56:44]     "exeErrorCode": 0,
[2025-11-29 04:56:44]     "exeErrorDiag": "",
[2025-11-29 04:56:44]     "pilotErrorCode": 0,
[2025-11-29 04:56:44]     "pilotErrorDiag": "",
[2025-11-29 04:56:44]  *** Listing of results directory ***
[2025-11-29 04:56:44] total 1327080
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc    576529 Nov 25 04:04 pilot3.tar.gz
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc      5112 Nov 25 04:36 queuedata.json
[2025-11-29 04:56:44] -rwx------. 1 boinc boinc     36292 Nov 25 04:40 runpilot2-wrapper.sh
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc       100 Nov 28 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 04:56:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 05:13 run_atlas
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc       105 Nov 28 05:13 job.xml
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc 408785553 Nov 28 05:13 EVNT.47483658._001497.pool.root.1
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc    590105 Nov 28 05:13 input.tar.gz
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc      6391 Nov 28 05:13 init_data.xml
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc     15847 Nov 28 05:13 start_atlas.sh
[2025-11-29 04:56:44] drwxrwx--x. 2 boinc boinc        68 Nov 28 05:13 shared
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc         0 Nov 28 05:13 boinc_lockfile
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc      2785 Nov 28 05:14 pandaJob.out
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc    991858 Nov 28 05:17 agis_schedconf.cvmfs.json
[2025-11-29 04:56:44] drwx------. 5 boinc boinc      4096 Nov 28 05:18 pilot3
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc       533 Nov 29 04:36 boinc_task_state.xml
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc 918628636 Nov 29 04:53 HITS.47556149._004840.pool.root.1
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc      1033 Nov 29 04:54 memory_monitor_summary.json
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc   1516240 Nov 29 04:54 agis_ddmendpoints.agis.ALL.json
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc   2462442 Nov 29 04:54 log.47556149._004840.job.log.tgz.1
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc        95 Nov 29 04:55 pilot_heartbeat.json
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc      8636 Nov 29 04:56 heartbeat.json
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc      8192 Nov 29 04:56 boinc_mmap_file
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc        29 Nov 29 04:56 wrapper_checkpoint.txt
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc      5070 Nov 29 04:56 pilotlog.txt
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc  11344733 Nov 29 04:56 log.47556149._004840.job.log.1
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc       353 Nov 29 04:56 output.list
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc       620 Nov 29 04:56 runtime_log
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc  13824000 Nov 29 04:56 result.tar.gz
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc      8817 Nov 29 04:56 runtime_log.err
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc       662 Nov 29 04:56 cqbLDmc5yh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4IJKDmUf8rMn.diag
[2025-11-29 04:56:44] -rw-r--r--. 1 boinc boinc     21407 Nov 29 04:56 stderr.txt
[2025-11-29 04:56:44] HITS file was successfully produced:
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc 918628636 Nov 29 04:53 shared/HITS.pool.root.1
[2025-11-29 04:56:44]  *** Contents of shared directory: ***
[2025-11-29 04:56:44] total 1310404
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc 408785553 Nov 28 05:13 ATLAS.root_0
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc    590105 Nov 28 05:13 input.tar.gz
[2025-11-29 04:56:44] -rw-r--r--. 2 boinc boinc     15847 Nov 28 05:13 start_atlas.sh
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc 918628636 Nov 29 04:53 HITS.pool.root.1
[2025-11-29 04:56:44] -rw-------. 1 boinc boinc  13824000 Nov 29 04:56 result.tar.gz
04:56:45 (10642): run_atlas exited; CPU time 316998.369170
04:56:45 (10642): called boinc_finish(0)

</stderr_txt>
]]>

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