Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:40:56 (13394): wrapper (7.7.26015): starting
17:40:56 (13394): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:40:56] Arguments: --nthreads 8
[2025-11-25 17:40:56] Threads: 8
[2025-11-25 17:40:56] Checking for CVMFS
[2025-11-25 17:40:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:40:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:40:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:40:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:40:57] 2.11.2.0 2878 56669 80260 153300 3 81 17230993 20275201 1 130560 0 11797711 99.789 3386464 31071 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 17:40:57] CVMFS is ok
[2025-11-25 17:40:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:40:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:40:57] Further information can be found at the LHC@home message board.
[2025-11-25 17:40:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:40:57] Checking for apptainer binary...
[2025-11-25 17:40:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:40:57] Running /usr/bin/apptainer --version
[2025-11-25 17:40:57] apptainer version 1.3.2-1.el7
[2025-11-25 17:40:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:40:59] c-204-27.aglt2.org
[2025-11-25 17:40:59] apptainer works
[2025-11-25 17:40:59] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:40:59] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:40:59] Starting ATLAS job with PandaID=6895674898
[2025-11-25 17:40:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:03:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:03:52] 2025-11-26 11:03:17,367 | INFO     | monitor loop #3288: job 0:6895674898 is in state 'finished'
[2025-11-26 06:03:52] 2025-11-26 11:03:17,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:03:52] 2025-11-26 11:03:19,106 | INFO     | time since job start (44520s) is within the limit (172800.0s)
[2025-11-26 06:03:52] 2025-11-26 11:03:19,869 | INFO     | monitor loop #3289: job 0:6895674898 is in state 'finished'
[2025-11-26 06:03:52] 2025-11-26 11:03:19,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,567 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 06:03:52] 2025-11-26 11:03:20,570 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 06:03:52] 2025-11-26 11:03:20,572 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895674898/memory_monitor_output.txt (trf name=prmon)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,584 | INFO     | extracted standard info from memory monitor json
[2025-11-26 06:03:52] 2025-11-26 11:03:20,584 | WARNING  | standard memory fields were not found in memory monitor json (or json doesn't exist yet): 'totRCHAR'
[2025-11-26 06:03:52] 2025-11-26 11:03:20,592 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:03:52] 2025-11-26 11:03:20,592 | INFO     | sum of square deviations: 40172776545.27273
[2025-11-26 06:03:52] 2025-11-26 11:03:20,598 | INFO     | sum of deviations: 585086074780.1819
[2025-11-26 06:03:52] 2025-11-26 11:03:20,598 | INFO     | mean x: 1764125916.1818182
[2025-11-26 06:03:52] 2025-11-26 11:03:20,598 | INFO     | mean y: 3177665.2371541504
[2025-11-26 06:03:52] 2025-11-26 11:03:20,598 | INFO     | intersect: -25689980649.41438
[2025-11-26 06:03:52] 2025-11-26 11:03:20,599 | INFO     | chi2: 2.348994719643329
[2025-11-26 06:03:52] 2025-11-26 11:03:20,600 | INFO     | sum of square deviations: 38993601190.902
[2025-11-26 06:03:52] 2025-11-26 11:03:20,605 | INFO     | sum of deviations: 574358396325.9122
[2025-11-26 06:03:52] 2025-11-26 11:03:20,605 | INFO     | mean x: 1764125763.6806388
[2025-11-26 06:03:52] 2025-11-26 11:03:20,605 | INFO     | mean y: 3176277.774451098
[2025-11-26 06:03:52] 2025-11-26 11:03:20,606 | INFO     | intersect: -25981611318.125935
[2025-11-26 06:03:52] 2025-11-26 11:03:20,606 | INFO     | chi2: 2.347599470898959
[2025-11-26 06:03:52] 2025-11-26 11:03:20,606 | INFO     | current chi2=2.347599470898959 (change=0.05939769607408398 %)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,607 | INFO     | right removable region: 500
[2025-11-26 06:03:52] 2025-11-26 11:03:20,607 | INFO     | sum of square deviations: 38993514325.42526
[2025-11-26 06:03:52] 2025-11-26 11:03:20,613 | INFO     | sum of deviations: 431683115800.8322
[2025-11-26 06:03:52] 2025-11-26 11:03:20,613 | INFO     | mean x: 1764126068.6886227
[2025-11-26 06:03:52] 2025-11-26 11:03:20,613 | INFO     | mean y: 3197457.7425149702
[2025-11-26 06:03:52] 2025-11-26 11:03:20,613 | INFO     | intersect: -19526805189.400837
[2025-11-26 06:03:52] 2025-11-26 11:03:20,614 | INFO     | chi2: 0.07408576175993385
[2025-11-26 06:03:52] 2025-11-26 11:03:20,614 | INFO     | current chi2=0.07408576175993385 (change=96.84606520651596 %)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,614 | INFO     | sum of square deviations: 37837615990.804474
[2025-11-26 06:03:52] 2025-11-26 11:03:20,620 | INFO     | sum of deviations: 402819538394.9393
[2025-11-26 06:03:52] 2025-11-26 11:03:20,620 | INFO     | mean x: 1764126221.1915324
[2025-11-26 06:03:52] 2025-11-26 11:03:20,620 | INFO     | mean y: 3201261.8427419355
[2025-11-26 06:03:52] 2025-11-26 11:03:20,620 | INFO     | intersect: -18777699476.28732
[2025-11-26 06:03:52] 2025-11-26 11:03:20,621 | INFO     | chi2: 0.046716515489242307
[2025-11-26 06:03:52] 2025-11-26 11:03:20,621 | INFO     | current chi2=0.046716515489242307 (change=36.94265351469065 %)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,621 | INFO     | sum of square deviations: 36704757477.78414
[2025-11-26 06:03:52] 2025-11-26 11:03:20,627 | INFO     | sum of deviations: 386597272372.7458
[2025-11-26 06:03:52] 2025-11-26 11:03:20,627 | INFO     | mean x: 1764126373.6965377
[2025-11-26 06:03:52] 2025-11-26 11:03:20,627 | INFO     | mean y: 3203444.085539715
[2025-11-26 06:03:52] 2025-11-26 11:03:20,627 | INFO     | intersect: -18577669746.6635
[2025-11-26 06:03:52] 2025-11-26 11:03:20,628 | INFO     | chi2: 0.044689055616172695
[2025-11-26 06:03:52] 2025-11-26 11:03:20,628 | INFO     | current chi2=0.044689055616172695 (change=4.339921014735115 %)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,628 | INFO     | left removable region: 30
[2025-11-26 06:03:52] 2025-11-26 11:03:20,628 | INFO     | sum of square deviations: 32193704779.99149
[2025-11-26 06:03:52] 2025-11-26 11:03:20,633 | INFO     | sum of deviations: 340674580433.71893
[2025-11-26 06:03:52] 2025-11-26 11:03:20,633 | INFO     | mean x: 1764126648.1957448
[2025-11-26 06:03:52] 2025-11-26 11:03:20,634 | INFO     | mean y: 3207179.959574468
[2025-11-26 06:03:52] 2025-11-26 11:03:20,634 | INFO     | intersect: -18664824654.62281
[2025-11-26 06:03:52] 2025-11-26 11:03:20,634 | INFO     | chi2: 0.03807863559414371
[2025-11-26 06:03:52] 2025-11-26 11:03:20,634 | INFO     | current memory leak: 10.58 B/s (using 470 data points, chi2=0.04)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,635 | INFO     | could have reported an average CPU frequency of 2172 MHz (28 samples)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,635 | INFO     | ..............................
[2025-11-26 06:03:52] 2025-11-26 11:03:20,635 | INFO     | . Timing measurements:
[2025-11-26 06:03:52] 2025-11-26 11:03:20,635 | INFO     | . get job = 0 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,635 | INFO     | . initial setup = 2 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | . payload setup = 9 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | . stage-in = 0 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | . payload execution = 44413 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | . stage-out = 3 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | . log creation = 0 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,636 | INFO     | ..............................
[2025-11-26 06:03:52] 2025-11-26 11:03:20,724 | INFO     | 
[2025-11-26 06:03:52] 2025-11-26 11:03:20,724 | INFO     | job summary report
[2025-11-26 06:03:52] 2025-11-26 11:03:20,724 | INFO     | --------------------------------------------------
[2025-11-26 06:03:52] 2025-11-26 11:03:20,724 | INFO     | PanDA job id: 6895674898
[2025-11-26 06:03:52] 2025-11-26 11:03:20,724 | INFO     | task id: 47556161
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | errors: (none)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | pilot state: finished 
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | transexitcode: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | exeerrorcode: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:20,725 | INFO     | exeerrordiag: 
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | exitcode: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | exitmsg: OK
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | cpuconsumptiontime: 345036 s
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | nevents: 1000
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | neventsw: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:20,726 | INFO     | pid: 24582
[2025-11-26 06:03:52] 2025-11-26 11:03:20,727 | INFO     | pgrp: 24582
[2025-11-26 06:03:52] 2025-11-26 11:03:20,727 | INFO     | corecount: 8
[2025-11-26 06:03:52] 2025-11-26 11:03:20,727 | INFO     | event service: False
[2025-11-26 06:03:52] 2025-11-26 11:03:20,727 | INFO     | sizes: {0: 2284198, 1: 2284340, 6: 2284602, 11: 2284630, 44487: 2330387, 44492: 2339381, 44495: 2339565, 44504: 2339811}
[2025-11-26 06:03:52] 2025-11-26 11:03:20,727 | INFO     | --------------------------------------------------
[2025-11-26 06:03:52] 2025-11-26 11:03:20,728 | INFO     | 
[2025-11-26 06:03:52] 2025-11-26 11:03:20,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 06:03:52] 2025-11-26 11:03:20,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:03:52] 2025-11-26 11:03:20,762 | INFO     | job 6895674898 has completed (purged errors)
[2025-11-26 06:03:52] 2025-11-26 11:03:20,762 | INFO     | overall cleanup function is called
[2025-11-26 06:03:52] 2025-11-26 11:03:21,777 | INFO     | --- collectZombieJob: --- 10, [24582]
[2025-11-26 06:03:52] 2025-11-26 11:03:21,777 | INFO     | zombie collector waiting for pid 24582
[2025-11-26 06:03:52] 2025-11-26 11:03:21,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:03:52] 2025-11-26 11:03:21,777 | INFO     | collected zombie processes
[2025-11-26 06:03:52] 2025-11-26 11:03:21,777 | INFO     | will attempt to kill all subprocesses of pid=24582
[2025-11-26 06:03:52] 2025-11-26 11:03:21,872 | INFO     | process IDs to be killed: [24582] (in reverse order)
[2025-11-26 06:03:52] 2025-11-26 11:03:21,930 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:03:52] 2025-11-26 11:03:21,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:03:52] 2025-11-26 11:03:21,934 | INFO     | did not find any defunct processes belonging to 24582
[2025-11-26 06:03:52] 2025-11-26 11:03:21,937 | INFO     | did not find any defunct processes belonging to 24582
[2025-11-26 06:03:52] 2025-11-26 11:03:21,940 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:03:52] 2025-11-26 11:03:21,940 | INFO     | ready for new job
[2025-11-26 06:03:52] 2025-11-26 11:03:21,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:03:52] 2025-11-26 11:03:21,943 | INFO     | ***************************************
[2025-11-26 06:03:52] 2025-11-26 11:03:21,943 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:03:52] 2025-11-26 11:03:21,943 | INFO     | ***************************************
[2025-11-26 06:03:52] 2025-11-26 11:03:21,944 | INFO     | 
[2025-11-26 06:03:52] 2025-11-26 11:03:21,944 | INFO     | architecture information:
[2025-11-26 06:03:52] 2025-11-26 11:03:21,945 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:03:52] 2025-11-26 11:03:21,965 | INFO     | cat /etc/os-release:
[2025-11-26 06:03:52] NAME="CentOS Linux"
[2025-11-26 06:03:52] VERSION="7 (Core)"
[2025-11-26 06:03:52] ID="centos"
[2025-11-26 06:03:52] ID_LIKE="rhel fedora"
[2025-11-26 06:03:52] VERSION_ID="7"
[2025-11-26 06:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:03:52] ANSI_COLOR="0;31"
[2025-11-26 06:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:03:52] HOME_URL="https://www.centos.org/"
[2025-11-26 06:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:03:52] 
[2025-11-26 06:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:03:52] 
[2025-11-26 06:03:52] 2025-11-26 11:03:21,965 | INFO     | ***************************************
[2025-11-26 06:03:52] 2025-11-26 11:03:22,468 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 06:03:52] 2025-11-26 11:03:22,490 | INFO     | sufficient remaining disk space (17428381696 B)
[2025-11-26 06:03:52] 2025-11-26 11:03:22,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:03:52] 2025-11-26 11:03:22,491 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:03:52] 2025-11-26 11:03:22,491 | INFO     | update_server=False
[2025-11-26 06:03:52] 2025-11-26 11:03:22,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:03:52] 2025-11-26 11:03:22,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:03:52] 2025-11-26 11:03:22,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:03:52] 2025-11-26 11:03:22,613 | INFO     | all job control threads have been joined
[2025-11-26 06:03:52] 2025-11-26 11:03:22,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:03:52] 2025-11-26 11:03:22,821 | INFO     | all data control threads have been joined
[2025-11-26 06:03:52] 2025-11-26 11:03:23,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:03:52] 2025-11-26 11:03:23,409 | INFO     | aborting loop
[2025-11-26 06:03:52] 2025-11-26 11:03:23,497 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,497 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,499 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,619 | INFO     | [job] control thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,801 | INFO     | all payload control threads have been joined
[2025-11-26 06:03:52] 2025-11-26 11:03:23,826 | INFO     | [data] control thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,885 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:23,935 | INFO     | [job] validate thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,107 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,157 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,411 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,498 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,806 | INFO     | [payload] control thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,931 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:24,970 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:26,627 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:03:52] 2025-11-26 11:03:32,671 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:03:52] 2025-11-26 11:03:33,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450451859264)>', '<ExcThread(monitor, started 140449121564416)>']
[2025-11-26 06:03:52] 2025-11-26 11:03:38,794 | INFO     | all workflow threads have been joined
[2025-11-26 06:03:52] 2025-11-26 11:03:38,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:03:52] 2025-11-26 11:03:38,795 | INFO     | traces error code: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:38,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:03:52] 2025-11-26 11:03:52,325 | INFO     | PID=17474 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:03:52] 2025-11-26 11:03:52,326 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:03:52] 2025-11-26 11:03:52,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:03:52] 2025-11-26 11:03:52,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:03:52] 2025-11-26 11:03:52,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:03:52] 2025-11-26 11:03:52,326 | INFO     | [monitor] control thread has ended
[2025-11-26 06:03:52] 2025-11-26 11:03:52,440 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:03:52] 2025-11-26 11:03:52,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:03:52] 2025-11-26 11:03:52,449 [wrapper] pilotpid: 17474
[2025-11-26 06:03:52] 2025-11-26 11:03:52,454 [wrapper] Pilot exit status: 0
[2025-11-26 06:03:52] 2025-11-26 11:03:52,471 [wrapper] pandaids: 6895674898
[2025-11-26 06:03:52] 2025-11-26 11:03:52,520 [wrapper] cleanup supervisor_pilot  1376 17475
[2025-11-26 06:03:52] 2025-11-26 11:03:52,525 [wrapper] Test setup, not cleaning
[2025-11-26 06:03:52] 2025-11-26 11:03:52,530 [wrapper] apfmon messages muted
[2025-11-26 06:03:52] 2025-11-26 11:03:52,536 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:03:52] 2025-11-26 11:03:52,541 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:03:52]  *** Error codes and diagnostics ***
[2025-11-26 06:03:52]     "exeErrorCode": 0,
[2025-11-26 06:03:52]     "exeErrorDiag": "",
[2025-11-26 06:03:52]     "pilotErrorCode": 0,
[2025-11-26 06:03:52]     "pilotErrorDiag": "",
[2025-11-26 06:03:52]  *** Listing of results directory ***
[2025-11-26 06:03:52] total 1324152
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 10:13 pilot3.tar.gz
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 10:41 queuedata.json
[2025-11-26 06:03:52] -rwx------ 1 boincer umatlas     36292 Nov 24 10:45 runpilot2-wrapper.sh
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas       100 Nov 25 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:03:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 17:40 run_atlas
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas       105 Nov 25 17:40 job.xml
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas 411111104 Nov 25 17:40 EVNT.47483658._002050.pool.root.1
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:40 start_atlas.sh
[2025-11-26 06:03:52] drwxrwx--x 2 boincer umatlas      4096 Nov 25 17:40 shared
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 17:40 input.tar.gz
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas         0 Nov 25 17:40 boinc_lockfile
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 17:40 pandaJob.out
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas        57 Nov 25 17:41 setup.sh.local
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas    991877 Nov 25 17:41 agis_schedconf.cvmfs.json
[2025-11-26 06:03:52] drwx------ 5 boincer umatlas      4096 Nov 25 17:41 pilot3
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas       532 Nov 26 05:51 boinc_task_state.xml
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas 924706567 Nov 26 06:01 HITS.47556161._000336.pool.root.1
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas   1516240 Nov 26 06:03 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas   1972704 Nov 26 06:03 log.47556161._000336.job.log.tgz.1
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas      8405 Nov 26 06:03 heartbeat.json
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 06:03 init_data.xml
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:03 boinc_mmap_file
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas        29 Nov 26 06:03 wrapper_checkpoint.txt
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas        95 Nov 26 06:03 pilot_heartbeat.json
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas       745 Nov 26 06:03 pilotlog.txt
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas   6127381 Nov 26 06:03 log.47556161._000336.job.log.1
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas       353 Nov 26 06:03 output.list
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:03 runtime_log
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas   8120320 Nov 26 06:03 result.tar.gz
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 06:03 runtime_log.err
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas       668 Nov 26 06:03 9VaLDm7vnh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmX6IKDmOmGY4n.diag
[2025-11-26 06:03:52] -rw-r--r-- 1 boincer umatlas     21420 Nov 26 06:03 stderr.txt
[2025-11-26 06:03:52] HITS file was successfully produced:
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas 924706567 Nov 26 06:01 shared/HITS.pool.root.1
[2025-11-26 06:03:52]  *** Contents of shared directory: ***
[2025-11-26 06:03:52] total 1313048
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas 411111104 Nov 25 17:40 ATLAS.root_0
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 17:40 start_atlas.sh
[2025-11-26 06:03:52] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 17:40 input.tar.gz
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas 924706567 Nov 26 06:01 HITS.pool.root.1
[2025-11-26 06:03:52] -rw------- 1 boincer umatlas   8120320 Nov 26 06:03 result.tar.gz
06:03:54 (13394): run_atlas exited; CPU time 342622.286412
06:03:54 (13394): called boinc_finish(0)

</stderr_txt>
]]>

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