Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:33 (2190348): wrapper (7.7.26015): starting
11:19:33 (2190348): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:19:33] Arguments: --nthreads 12
[2025-11-27 11:19:33] Threads: 12
[2025-11-27 11:19:33] Checking for CVMFS
[2025-11-27 11:19:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:19:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:19:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:19:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:19:34] 2.13.3.0 10248 28519 95184 153360 3 59 39314878 46080000 1695 130560 1 14214820 99.935 1482172 2061 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-27 11:19:34] CVMFS is ok
[2025-11-27 11:19:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:19:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:19:34] Further information can be found at the LHC@home message board.
[2025-11-27 11:19:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:19:34] Checking for apptainer binary...
[2025-11-27 11:19:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:19:34] Running /usr/bin/apptainer --version
[2025-11-27 11:19:34] apptainer version 1.4.3-1.el9
[2025-11-27 11:19:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:19:34] gpu01.farm.particle.cz
[2025-11-27 11:19:34] apptainer works
[2025-11-27 11:19:34] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:19:34] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:19:34] Starting ATLAS job with PandaID=6896450402
[2025-11-27 11:19:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:20:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:20:09] 2025-11-27 14:19:17,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:20:09] 2025-11-27 14:19:18,890 | INFO     | time since job start (14377s) is within the limit (172800.0s)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,260 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:20:09] 2025-11-27 14:19:19,265 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3219.852625
[2025-11-27 15:20:09] 2025-11-27 14:19:19,270 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6896450402/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,270 | INFO     | extracted standard info from prmon json
[2025-11-27 15:20:09] 2025-11-27 14:19:19,270 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:20:09] 2025-11-27 14:19:19,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:20:09] 2025-11-27 14:19:19,274 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:20:09] 2025-11-27 14:19:19,274 | INFO     | sum of square deviations: 4075746610.2838874
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | sum of deviations: 135248201928.17377
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | mean x: 1764245969.4449153
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | mean y: 3570655.436440678
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | intersect: -58540573017.37954
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | chi2: 4.522533632301028
[2025-11-27 15:20:09] 2025-11-27 14:19:19,275 | INFO     | sum of square deviations: 3822209865.7229524
[2025-11-27 15:20:09] 2025-11-27 14:19:19,276 | INFO     | sum of deviations: 223741856137.03027
[2025-11-27 15:20:09] 2025-11-27 14:19:19,276 | INFO     | mean x: 1764245816.965368
[2025-11-27 15:20:09] 2025-11-27 14:19:19,276 | INFO     | mean y: 3623684.878787879
[2025-11-27 15:20:09] 2025-11-27 14:19:19,276 | INFO     | intersect: -103270567852.78564
[2025-11-27 15:20:09] 2025-11-27 14:19:19,276 | INFO     | chi2: 1.5844664380454219
[2025-11-27 15:20:09] 2025-11-27 14:19:19,277 | INFO     | current chi2=1.5844664380454219 (change=64.96507119971912 %)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,277 | INFO     | sum of square deviations: 3579361392.2831945
[2025-11-27 15:20:09] 2025-11-27 14:19:19,277 | INFO     | sum of deviations: 217502892538.18585
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | mean x: 1764245664.4690266
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | mean y: 3619722.5265486725
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | intersect: -107202245546.41606
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | chi2: 1.5565429808189264
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | current chi2=1.5565429808189264 (change=1.76232557257202 %)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | right removable region: 225
[2025-11-27 15:20:09] 2025-11-27 14:19:19,278 | INFO     | sum of square deviations: 3822116660.476181
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | sum of deviations: 76107738960.04753
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | mean x: 1764246121.952381
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | mean y: 3605931.458874459
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | intersect: -35126871560.06267
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | chi2: 3.0363062877830767
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | current chi2=3.0363062877830767 (change=32.86271513611212 %)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,279 | INFO     | sum of square deviations: 3579217738.2168207
[2025-11-27 15:20:09] 2025-11-27 14:19:19,280 | INFO     | sum of deviations: 63992028756.82298
[2025-11-27 15:20:09] 2025-11-27 14:19:19,280 | INFO     | mean x: 1764246274.4646018
[2025-11-27 15:20:09] 2025-11-27 14:19:19,280 | INFO     | mean y: 3613526.4778761063
[2025-11-27 15:20:09] 2025-11-27 14:19:19,280 | INFO     | intersect: -31538948727.894127
[2025-11-27 15:20:09] 2025-11-27 14:19:19,280 | INFO     | chi2: 3.0311525185228003
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | current chi2=3.0311525185228003 (change=0.16973812164514188 %)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | left removable region: 20
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | sum of square deviations: 2671351284.9951305
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | sum of deviations: 121509578469.04393
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | mean x: 1764246243.995122
[2025-11-27 15:20:09] 2025-11-27 14:19:19,281 | INFO     | mean y: 3682613.043902439
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | intersect: -80245148241.79893
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | chi2: 0.00895015421072695
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | current memory leak: 45.49 B/s (using 205 data points, chi2=0.01)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | could have reported an average CPU frequency of 3193 MHz (11 samples)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | ..............................
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . Timing measurements:
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . get job = 0 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . initial setup = 2 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . payload setup = 3 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . stage-in = 0 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . payload execution = 14348 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . stage-out = 3 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | . log creation = 0 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,282 | INFO     | ..............................
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | job summary report
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | --------------------------------------------------
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | PanDA job id: 6896450402
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | task id: 47556149
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | errors: (none)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | pilot state: finished 
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | transexitcode: 0
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | exeerrorcode: 0
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | exeerrordiag: 
[2025-11-27 15:20:09] 2025-11-27 14:19:19,454 | INFO     | exitcode: 0
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | exitmsg: OK
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | cpuconsumptiontime: 167262 s
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | nevents: 1000
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | neventsw: 0
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | pid: 2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | pgrp: 2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | corecount: 12
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | event service: False
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | sizes: {0: 2284201, 1: 2284343, 3: 2284605, 11: 2284633, 14355: 2316459, 14358: 2325481, 14359: 2325665, 14364: 2325911}
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | --------------------------------------------------
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 14:19:19,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 14:19:19,471 | INFO     | job 6896450402 has completed (purged errors)
[2025-11-27 15:20:09] 2025-11-27 14:19:19,471 | INFO     | overall cleanup function is called
[2025-11-27 15:20:09] 2025-11-27 14:19:20,489 | INFO     | --- collectZombieJob: --- 10, [2200942]
[2025-11-27 15:20:09] 2025-11-27 14:19:20,489 | INFO     | zombie collector waiting for pid 2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:20,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:20:09] 2025-11-27 14:19:20,489 | INFO     | collected zombie processes
[2025-11-27 15:20:09] 2025-11-27 14:19:20,489 | INFO     | will attempt to kill all subprocesses of pid=2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:20,584 | INFO     | process IDs to be killed: [2200942] (in reverse order)
[2025-11-27 15:20:09] 2025-11-27 14:19:20,627 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:20:09] 2025-11-27 14:19:20,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:20:09] 2025-11-27 14:19:20,632 | INFO     | did not find any defunct processes belonging to 2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:20,636 | INFO     | did not find any defunct processes belonging to 2200942
[2025-11-27 15:20:09] 2025-11-27 14:19:20,637 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:20:09] 2025-11-27 14:19:20,637 | INFO     | ready for new job
[2025-11-27 15:20:09] 2025-11-27 14:19:20,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:20:09] 2025-11-27 14:19:20,639 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 14:19:20,639 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:20:09] 2025-11-27 14:19:20,639 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 14:19:20,639 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 14:19:20,641 | INFO     | architecture information:
[2025-11-27 15:20:09] 2025-11-27 14:19:20,641 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:20:09] 2025-11-27 14:19:20,654 | INFO     | cat /etc/os-release:
[2025-11-27 15:20:09] NAME="CentOS Linux"
[2025-11-27 15:20:09] VERSION="7 (Core)"
[2025-11-27 15:20:09] ID="centos"
[2025-11-27 15:20:09] ID_LIKE="rhel fedora"
[2025-11-27 15:20:09] VERSION_ID="7"
[2025-11-27 15:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:20:09] ANSI_COLOR="0;31"
[2025-11-27 15:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:20:09] HOME_URL="https://www.centos.org/"
[2025-11-27 15:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:20:09] 
[2025-11-27 15:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:20:09] 
[2025-11-27 15:20:09] 2025-11-27 14:19:20,654 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 14:19:21,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | INFO     | sufficient remaining disk space (13322158080 B)
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | INFO     | update_server=False
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 14:19:21,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 14:19:21,309 | INFO     | all data control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 14:19:21,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 14:19:21,507 | INFO     | aborting loop
[2025-11-27 15:20:09] 2025-11-27 14:19:21,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 14:19:21,618 | INFO     | all payload control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 14:19:21,911 | INFO     | all job control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 14:19:22,174 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,177 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,209 | INFO     | [job] validate thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,314 | INFO     | [data] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,421 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,512 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,596 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,624 | INFO     | [payload] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:22,917 | INFO     | [job] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,343 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,532 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,593 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,645 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:23,697 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:25,178 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 14:19:38,923 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-11-27 15:20:09] 2025-11-27 14:19:52,076 | INFO     | PID=2194272 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:20:09] 2025-11-27 14:19:52,076 | INFO     | .. there are 2 such processes running
[2025-11-27 15:20:09] 2025-11-27 14:19:52,076 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:20:09] 2025-11-27 14:19:52,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:20:09] 2025-11-27 14:19:52,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:20:09] 2025-11-27 14:20:02,107 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:20:09] 2025-11-27 14:20:04,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273612113728)>', '<ExcThread(monitor, started 140273262769920)>']
[2025-11-27 15:20:09] 2025-11-27 14:20:04,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:20:09] 2025-11-27 14:20:04,133 | INFO     | [monitor] control thread has ended
[2025-11-27 15:20:09] 2025-11-27 14:20:09,034 | INFO     | all workflow threads have been joined
[2025-11-27 15:20:09] 2025-11-27 14:20:09,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:20:09] 2025-11-27 14:20:09,035 | INFO     | traces error code: 0
[2025-11-27 15:20:09] 2025-11-27 14:20:09,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:20:09] 2025-11-27 14:20:09,100 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:20:09] 2025-11-27 14:20:09,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:20:09] 2025-11-27 14:20:09,104 [wrapper] pilotpid: 2194272
[2025-11-27 15:20:09] 2025-11-27 14:20:09,106 [wrapper] Pilot exit status: 0
[2025-11-27 15:20:09] 2025-11-27 14:20:09,113 [wrapper] pandaids: 6896450402
[2025-11-27 15:20:09] 2025-11-27 14:20:09,141 [wrapper] cleanup supervisor_pilot 2391153 2194273
[2025-11-27 15:20:09] 2025-11-27 14:20:09,143 [wrapper] Test setup, not cleaning
[2025-11-27 15:20:09] 2025-11-27 14:20:09,145 [wrapper] apfmon messages muted
[2025-11-27 15:20:09] 2025-11-27 14:20:09,147 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:20:09] 2025-11-27 14:20:09,148 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:20:09]  *** Error codes and diagnostics ***
[2025-11-27 15:20:09]     "exeErrorCode": 0,
[2025-11-27 15:20:09]     "exeErrorDiag": "",
[2025-11-27 15:20:09]     "pilotErrorCode": 0,
[2025-11-27 15:20:09]     "pilotErrorDiag": "",
[2025-11-27 15:20:09]  *** Listing of results directory ***
[2025-11-27 15:20:09] total 1306052
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc    576529 Nov 25 04:04 pilot3.tar.gz
[2025-11-27 15:20:09] -rwx------ 1 boinc boinc     36292 Nov 25 04:36 runpilot2-wrapper.sh
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc      5112 Nov 25 04:36 queuedata.json
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc       100 Nov 27 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:20:09] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 11:19 run_atlas
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc       105 Nov 27 11:19 job.xml
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc      9445 Nov 27 11:19 init_data.xml
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc 410352147 Nov 27 11:19 EVNT.47483658._001494.pool.root.1
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:19 start_atlas.sh
[2025-11-27 15:20:09] drwxrwx--x 2 boinc boinc      4096 Nov 27 11:19 shared
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc    590112 Nov 27 11:19 input.tar.gz
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:19 boinc_lockfile
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc      2786 Nov 27 11:19 pandaJob.out
[2025-11-27 15:20:09] -rw------- 1 boinc boinc    991564 Nov 27 11:19 agis_schedconf.cvmfs.json
[2025-11-27 15:20:09] drwx------ 5 boinc boinc      4096 Nov 27 11:19 pilot3
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc       532 Nov 27 15:12 boinc_task_state.xml
[2025-11-27 15:20:09] -rw------- 1 boinc boinc 915016860 Nov 27 15:18 HITS.47556149._004810.pool.root.1
[2025-11-27 15:20:09] -rw------- 1 boinc boinc      1031 Nov 27 15:19 memory_monitor_summary.json
[2025-11-27 15:20:09] -rw------- 1 boinc boinc   1516240 Nov 27 15:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:20:09] -rw------- 1 boinc boinc   1974703 Nov 27 15:19 log.47556149._004810.job.log.tgz.1
[2025-11-27 15:20:09] -rw------- 1 boinc boinc        95 Nov 27 15:19 pilot_heartbeat.json
[2025-11-27 15:20:09] -rw------- 1 boinc boinc      8593 Nov 27 15:19 heartbeat.json
[2025-11-27 15:20:09] -rw------- 1 boinc boinc      4823 Nov 27 15:20 pilotlog.txt
[2025-11-27 15:20:09] -rw------- 1 boinc boinc   2079720 Nov 27 15:20 log.47556149._004810.job.log.1
[2025-11-27 15:20:09] -rw------- 1 boinc boinc       353 Nov 27 15:20 output.list
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:20 boinc_mmap_file
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc        29 Nov 27 15:20 wrapper_checkpoint.txt
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:20 runtime_log
[2025-11-27 15:20:09] -rw------- 1 boinc boinc   4075520 Nov 27 15:20 result.tar.gz
[2025-11-27 15:20:09] -rw------- 1 boinc boinc       667 Nov 27 15:20 UjsNDmT2yh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuIJKDmbw4nDo.diag
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc      8855 Nov 27 15:20 runtime_log.err
[2025-11-27 15:20:09] -rw-r--r-- 1 boinc boinc     21330 Nov 27 15:20 stderr.txt
[2025-11-27 15:20:09] HITS file was successfully produced:
[2025-11-27 15:20:09] -rw------- 1 boinc boinc 915016860 Nov 27 15:18 shared/HITS.pool.root.1
[2025-11-27 15:20:09]  *** Contents of shared directory: ***
[2025-11-27 15:20:09] total 1298888
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc 410352147 Nov 27 11:19 ATLAS.root_0
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:19 start_atlas.sh
[2025-11-27 15:20:09] -rw-r--r-- 2 boinc boinc    590112 Nov 27 11:19 input.tar.gz
[2025-11-27 15:20:09] -rw------- 1 boinc boinc 915016860 Nov 27 15:18 HITS.pool.root.1
[2025-11-27 15:20:09] -rw------- 1 boinc boinc   4075520 Nov 27 15:20 result.tar.gz
15:20:11 (2190348): run_atlas exited; CPU time 167114.394872
15:20:11 (2190348): called boinc_finish(0)

</stderr_txt>
]]>

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