Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:02:19 (2615827): wrapper (7.7.26015): starting
23:02:19 (2615827): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 23:02:19] Arguments: --nthreads 12
[2025-11-26 23:02:19] Threads: 12
[2025-11-26 23:02:19] Checking for CVMFS
[2025-11-26 23:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:02:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:02:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:02:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:02:19] 2.13.3.0 23050 7509 98252 153335 1 81 3813175 4097025 1044 130560 0 5837523 99.892 911101 18190 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.185.49.55:3128 1
[2025-11-26 23:02:19] CVMFS is ok
[2025-11-26 23:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:02:19] Further information can be found at the LHC@home message board.
[2025-11-26 23:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:02:19] Checking for apptainer binary...
[2025-11-26 23:02:19] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-26 23:02:19] apptainer is not installed, using version from CVMFS
[2025-11-26 23:02:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:02:19] pckelar3.cern.ch
[2025-11-26 23:02:19] apptainer works
[2025-11-26 23:02:19] Set ATHENA_PROC_NUMBER=12
[2025-11-26 23:02:19] Set ATHENA_CORE_NUMBER=12
[2025-11-26 23:02:19] Starting ATLAS job with PandaID=6895350612
[2025-11-26 23:02:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:51:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:51:47] 2025-11-27 09:50:44,124 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:51:47] 2025-11-27 09:50:44,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:51:47] 2025-11-27 09:50:44,143 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:51:47] 2025-11-27 09:50:44,144 | INFO     | sum of square deviations: 104545115309.36713
[2025-11-27 10:51:47] 2025-11-27 09:50:44,155 | INFO     | sum of deviations: 1348790804322.6367
[2025-11-27 10:51:47] 2025-11-27 09:50:44,155 | INFO     | mean x: 1764215779.4698277
[2025-11-27 10:51:47] 2025-11-27 09:50:44,155 | INFO     | mean y: 3571830.3160919542
[2025-11-27 10:51:47] 2025-11-27 09:50:44,155 | INFO     | intersect: -22757491784.643547
[2025-11-27 10:51:47] 2025-11-27 09:50:44,156 | INFO     | chi2: 6.581948360154889
[2025-11-27 10:51:47] 2025-11-27 09:50:44,157 | INFO     | sum of square deviations: 102308330399.62973
[2025-11-27 10:51:47] 2025-11-27 09:50:44,166 | INFO     | sum of deviations: 1607853648405.017
[2025-11-27 10:51:47] 2025-11-27 09:50:44,166 | INFO     | mean x: 1764215626.9768453
[2025-11-27 10:51:47] 2025-11-27 09:50:44,166 | INFO     | mean y: 3589481.4384949347
[2025-11-27 10:51:47] 2025-11-27 09:50:44,166 | INFO     | intersect: -27722408209.34321
[2025-11-27 10:51:47] 2025-11-27 09:50:44,167 | INFO     | chi2: 3.8861100919923195
[2025-11-27 10:51:47] 2025-11-27 09:50:44,167 | INFO     | current chi2=3.8861100919923195 (change=40.95805862717419 %)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,167 | INFO     | sum of square deviations: 100103685627.32278
[2025-11-27 10:51:47] 2025-11-27 09:50:44,176 | INFO     | sum of deviations: 1756303573651.3762
[2025-11-27 10:51:47] 2025-11-27 09:50:44,176 | INFO     | mean x: 1764215474.483965
[2025-11-27 10:51:47] 2025-11-27 09:50:44,176 | INFO     | mean y: 3599737.6705539357
[2025-11-27 10:51:47] 2025-11-27 09:50:44,176 | INFO     | intersect: -30949285993.856667
[2025-11-27 10:51:47] 2025-11-27 09:50:44,177 | INFO     | chi2: 2.825328418099745
[2025-11-27 10:51:47] 2025-11-27 09:50:44,177 | INFO     | current chi2=2.825328418099745 (change=27.29674787336599 %)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,178 | INFO     | sum of square deviations: 97930823016.88113
[2025-11-27 10:51:47] 2025-11-27 09:50:44,186 | INFO     | sum of deviations: 1765888358284.498
[2025-11-27 10:51:47] 2025-11-27 09:50:44,186 | INFO     | mean x: 1764215321.9867842
[2025-11-27 10:51:47] 2025-11-27 09:50:44,186 | INFO     | mean y: 3600401.610866373
[2025-11-27 10:51:47] 2025-11-27 09:50:44,186 | INFO     | intersect: -31808725918.43417
[2025-11-27 10:51:47] 2025-11-27 09:50:44,187 | INFO     | chi2: 2.7273352138854214
[2025-11-27 10:51:47] 2025-11-27 09:50:44,187 | INFO     | current chi2=2.7273352138854214 (change=3.468382775841386 %)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,187 | INFO     | right removable region: 680
[2025-11-27 10:51:47] 2025-11-27 09:50:44,188 | INFO     | sum of square deviations: 102307960862.58195
[2025-11-27 10:51:47] 2025-11-27 09:50:44,197 | INFO     | sum of deviations: 1100953025171.5513
[2025-11-27 10:51:47] 2025-11-27 09:50:44,197 | INFO     | mean x: 1764215931.975398
[2025-11-27 10:51:47] 2025-11-27 09:50:44,197 | INFO     | mean y: 3588698.091172214
[2025-11-27 10:51:47] 2025-11-27 09:50:44,197 | INFO     | intersect: -18981433102.636993
[2025-11-27 10:51:47] 2025-11-27 09:50:44,198 | INFO     | chi2: 4.24131984846566
[2025-11-27 10:51:47] 2025-11-27 09:50:44,198 | INFO     | current chi2=4.24131984846566 (change=35.561332049620454 %)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,198 | INFO     | sum of square deviations: 100103115405.07872
[2025-11-27 10:51:47] 2025-11-27 09:50:44,207 | INFO     | sum of deviations: 1025386538383.4817
[2025-11-27 10:51:47] 2025-11-27 09:50:44,207 | INFO     | mean x: 1764216084.4752188
[2025-11-27 10:51:47] 2025-11-27 09:50:44,207 | INFO     | mean y: 3593924.7930029156
[2025-11-27 10:51:47] 2025-11-27 09:50:44,207 | INFO     | intersect: -18067805916.262543
[2025-11-27 10:51:47] 2025-11-27 09:50:44,208 | INFO     | chi2: 4.146401693572611
[2025-11-27 10:51:47] 2025-11-27 09:50:44,208 | INFO     | current chi2=4.146401693572611 (change=2.2379390917048365 %)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,208 | INFO     | left removable region: 20
[2025-11-27 10:51:47] 2025-11-27 09:50:44,209 | INFO     | sum of square deviations: 89147484984.96202
[2025-11-27 10:51:47] 2025-11-27 09:50:44,217 | INFO     | sum of deviations: 1310403663449.0007
[2025-11-27 10:51:47] 2025-11-27 09:50:44,217 | INFO     | mean x: 1764215901.4924242
[2025-11-27 10:51:47] 2025-11-27 09:50:44,217 | INFO     | mean y: 3632637.4
[2025-11-27 10:51:47] 2025-11-27 09:50:44,217 | INFO     | intersect: -25929067324.02493
[2025-11-27 10:51:47] 2025-11-27 09:50:44,218 | INFO     | chi2: 0.1760925629688072
[2025-11-27 10:51:47] 2025-11-27 09:50:44,218 | INFO     | current memory leak: 14.70 B/s (using 660 data points, chi2=0.18)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,218 | INFO     | could have reported an average CPU frequency of 2803 MHz (26 samples)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | ..............................
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . Timing measurements:
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . get job = 0 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . initial setup = 1 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . payload setup = 8 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . stage-in = 0 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . payload execution = 42455 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . stage-out = 1 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | . log creation = 0 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,219 | INFO     | ..............................
[2025-11-27 10:51:47] 2025-11-27 09:50:44,288 | INFO     | 
[2025-11-27 10:51:47] 2025-11-27 09:50:44,288 | INFO     | job summary report
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | --------------------------------------------------
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | PanDA job id: 6895350612
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | task id: 47556137
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | errors: (none)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:51:47] 2025-11-27 09:50:44,289 | INFO     | pilot state: finished 
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | transexitcode: 0
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | exeerrorcode: 0
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | exeerrordiag: 
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | exitcode: 0
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | exitmsg: OK
[2025-11-27 10:51:47] 2025-11-27 09:50:44,290 | INFO     | cpuconsumptiontime: 494368 s
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | nevents: 1000
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | neventsw: 0
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | pid: 2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | pgrp: 2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | corecount: 12
[2025-11-27 10:51:47] 2025-11-27 09:50:44,291 | INFO     | event service: False
[2025-11-27 10:51:47] 2025-11-27 09:50:44,292 | INFO     | sizes: {0: 2284042, 1: 2284241, 6: 2284503, 12: 2284531, 42467: 2328286, 42468: 2328285, 42469: 2337463, 42471: 2337519, 42477: 2337765}
[2025-11-27 10:51:47] 2025-11-27 09:50:44,292 | INFO     | --------------------------------------------------
[2025-11-27 10:51:47] 2025-11-27 09:50:44,292 | INFO     | 
[2025-11-27 10:51:47] 2025-11-27 09:50:44,292 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-27 10:51:47] 2025-11-27 09:50:44,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:51:47] 2025-11-27 09:50:44,312 | INFO     | job 6895350612 has completed (purged errors)
[2025-11-27 10:51:47] 2025-11-27 09:50:44,312 | INFO     | overall cleanup function is called
[2025-11-27 10:51:47] 2025-11-27 09:50:45,335 | INFO     | --- collectZombieJob: --- 10, [2627249]
[2025-11-27 10:51:47] 2025-11-27 09:50:45,336 | INFO     | zombie collector waiting for pid 2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:45,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:51:47] 2025-11-27 09:50:45,336 | INFO     | collected zombie processes
[2025-11-27 10:51:47] 2025-11-27 09:50:45,336 | INFO     | will attempt to kill all subprocesses of pid=2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:45,517 | INFO     | process IDs to be killed: [2627249] (in reverse order)
[2025-11-27 10:51:47] 2025-11-27 09:50:45,576 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:51:47] 2025-11-27 09:50:45,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:51:47] 2025-11-27 09:50:45,582 | INFO     | did not find any defunct processes belonging to 2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:45,588 | INFO     | did not find any defunct processes belonging to 2627249
[2025-11-27 10:51:47] 2025-11-27 09:50:45,590 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:51:47] 2025-11-27 09:50:45,590 | INFO     | ready for new job
[2025-11-27 10:51:47] 2025-11-27 09:50:45,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:51:47] 2025-11-27 09:50:45,593 | INFO     | ***************************************
[2025-11-27 10:51:47] 2025-11-27 09:50:45,593 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:51:47] 2025-11-27 09:50:45,593 | INFO     | ***************************************
[2025-11-27 10:51:47] 2025-11-27 09:50:45,593 | INFO     | 
[2025-11-27 10:51:47] 2025-11-27 09:50:45,595 | INFO     | architecture information:
[2025-11-27 10:51:47] 2025-11-27 09:50:45,595 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:51:47] 2025-11-27 09:50:45,610 | INFO     | cat /etc/os-release:
[2025-11-27 10:51:47] NAME="CentOS Linux"
[2025-11-27 10:51:47] VERSION="7 (Core)"
[2025-11-27 10:51:47] ID="centos"
[2025-11-27 10:51:47] ID_LIKE="rhel fedora"
[2025-11-27 10:51:47] VERSION_ID="7"
[2025-11-27 10:51:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:51:47] ANSI_COLOR="0;31"
[2025-11-27 10:51:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:51:47] HOME_URL="https://www.centos.org/"
[2025-11-27 10:51:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:51:47] 
[2025-11-27 10:51:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:51:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:51:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:51:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:51:47] 
[2025-11-27 10:51:47] 2025-11-27 09:50:45,610 | INFO     | ***************************************
[2025-11-27 10:51:47] 2025-11-27 09:50:46,113 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-27 10:51:47] 2025-11-27 09:50:46,131 | INFO     | sufficient remaining disk space (562439389184 B)
[2025-11-27 10:51:47] 2025-11-27 09:50:46,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:51:47] 2025-11-27 09:50:46,132 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:51:47] 2025-11-27 09:50:46,132 | INFO     | update_server=False
[2025-11-27 10:51:47] 2025-11-27 09:50:46,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:51:47] 2025-11-27 09:50:46,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:51:47] 2025-11-27 09:50:46,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:51:47] 2025-11-27 09:50:46,133 | INFO     | aborting loop
[2025-11-27 10:51:47] 2025-11-27 09:50:46,326 | INFO     | all payload control threads have been joined
[2025-11-27 10:51:47] 2025-11-27 09:50:46,427 | INFO     | all data control threads have been joined
[2025-11-27 10:51:47] 2025-11-27 09:50:46,491 | INFO     | all job control threads have been joined
[2025-11-27 10:51:47] 2025-11-27 09:50:47,138 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,138 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,139 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,165 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:51:47] 2025-11-27 09:50:47,269 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,332 | INFO     | [payload] control thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,433 | INFO     | [data] control thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,497 | INFO     | [job] control thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,559 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:47,766 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:48,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:48,063 | INFO     | [job] validate thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:48,382 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:48,388 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:48,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:51:47] 2025-11-27 09:50:49,207 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:50:52,675 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:51:47] 2025-11-27 09:51:16,470 | INFO     | PID=2619681 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:51:47] 2025-11-27 09:51:16,471 | INFO     | .. there are 2 such processes running
[2025-11-27 10:51:47] 2025-11-27 09:51:16,471 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:51:47] 2025-11-27 09:51:16,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:51:47] 2025-11-27 09:51:16,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:51:47] 2025-11-27 09:51:41,258 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:51:47] 2025-11-27 09:51:42,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571464570688)>', '<ExcThread(monitor, started 140570613753600)>']
[2025-11-27 10:51:47] 2025-11-27 09:51:42,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:51:47] 2025-11-27 09:51:42,593 | INFO     | [monitor] control thread has ended
[2025-11-27 10:51:47] 2025-11-27 09:51:47,167 | INFO     | all workflow threads have been joined
[2025-11-27 10:51:47] 2025-11-27 09:51:47,167 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:51:47] 2025-11-27 09:51:47,168 | INFO     | traces error code: 0
[2025-11-27 10:51:47] 2025-11-27 09:51:47,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:51:47] 2025-11-27 09:51:47,275 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:51:47] 2025-11-27 09:51:47,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:51:47] 2025-11-27 09:51:47,281 [wrapper] pilotpid: 2619681
[2025-11-27 10:51:47] 2025-11-27 09:51:47,283 [wrapper] Pilot exit status: 0
[2025-11-27 10:51:47] 2025-11-27 09:51:47,293 [wrapper] pandaids: 6895350612
[2025-11-27 10:51:47] 2025-11-27 09:51:47,331 [wrapper] cleanup supervisor_pilot 2859678 2619682
[2025-11-27 10:51:47] 2025-11-27 09:51:47,334 [wrapper] Test setup, not cleaning
[2025-11-27 10:51:47] 2025-11-27 09:51:47,337 [wrapper] apfmon messages muted
[2025-11-27 10:51:47] 2025-11-27 09:51:47,339 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:51:47] 2025-11-27 09:51:47,342 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:51:47]  *** Error codes and diagnostics ***
[2025-11-27 10:51:47]     "exeErrorCode": 0,
[2025-11-27 10:51:47]     "exeErrorDiag": "",
[2025-11-27 10:51:47]     "pilotErrorCode": 0,
[2025-11-27 10:51:47]     "pilotErrorDiag": "",
[2025-11-27 10:51:47]  *** Listing of results directory ***
[2025-11-27 10:51:47] total 1312232
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc    576529 Nov 22 22:27 pilot3.tar.gz
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:36 queuedata.json
[2025-11-27 10:51:47] -rwx------ 1 boinc boinc     36292 Nov 22 22:36 runpilot2-wrapper.sh
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc       100 Nov 26 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:51:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 23:02 run_atlas
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc       105 Nov 26 23:02 job.xml
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc      6236 Nov 26 23:02 init_data.xml
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc 410363815 Nov 26 23:02 EVNT.47483658._000516.pool.root.1
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:02 start_atlas.sh
[2025-11-27 10:51:47] drwxrwx--x 2 boinc boinc        68 Nov 26 23:02 shared
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc    590103 Nov 26 23:02 input.tar.gz
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc         0 Nov 26 23:02 boinc_lockfile
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc      2784 Nov 26 23:02 pandaJob.out
[2025-11-27 10:51:47] -rw------- 1 boinc boinc    991538 Nov 26 23:02 agis_schedconf.cvmfs.json
[2025-11-27 10:51:47] drwx------ 5 boinc boinc      4096 Nov 26 23:02 pilot3
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc       533 Nov 27 10:36 boinc_task_state.xml
[2025-11-27 10:51:47] -rw------- 1 boinc boinc 912881650 Nov 27 10:50 HITS.47556137._005117.pool.root.1
[2025-11-27 10:51:47] -rw------- 1 boinc boinc      1038 Nov 27 10:50 memory_monitor_summary.json
[2025-11-27 10:51:47] -rw------- 1 boinc boinc   1516240 Nov 27 10:50 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:51:47] -rw------- 1 boinc boinc   2395350 Nov 27 10:50 log.47556137._005117.job.log.tgz.1
[2025-11-27 10:51:47] -rw------- 1 boinc boinc        95 Nov 27 10:50 pilot_heartbeat.json
[2025-11-27 10:51:47] -rw------- 1 boinc boinc      8607 Nov 27 10:50 heartbeat.json
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc      8192 Nov 27 10:51 boinc_mmap_file
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc        29 Nov 27 10:51 wrapper_checkpoint.txt
[2025-11-27 10:51:47] -rw------- 1 boinc boinc      4824 Nov 27 10:51 pilotlog.txt
[2025-11-27 10:51:47] -rw------- 1 boinc boinc   5890430 Nov 27 10:51 log.47556137._005117.job.log.1
[2025-11-27 10:51:47] -rw------- 1 boinc boinc       353 Nov 27 10:51 output.list
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc       620 Nov 27 10:51 runtime_log
[2025-11-27 10:51:47] -rw------- 1 boinc boinc   8304640 Nov 27 10:51 result.tar.gz
[2025-11-27 10:51:47] -rw------- 1 boinc boinc       665 Nov 27 10:51 wuPODmsSAh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOQKKDmXpPZ4m.diag
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc      8842 Nov 27 10:51 runtime_log.err
[2025-11-27 10:51:47] -rw-r--r-- 1 boinc boinc     21237 Nov 27 10:51 stderr.txt
[2025-11-27 10:51:47] HITS file was successfully produced:
[2025-11-27 10:51:47] -rw------- 1 boinc boinc 912881650 Nov 27 10:50 shared/HITS.pool.root.1
[2025-11-27 10:51:47]  *** Contents of shared directory: ***
[2025-11-27 10:51:47] total 1300944
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc 410363815 Nov 26 23:02 ATLAS.root_0
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:02 start_atlas.sh
[2025-11-27 10:51:47] -rw-r--r-- 2 boinc boinc    590103 Nov 26 23:02 input.tar.gz
[2025-11-27 10:51:47] -rw------- 1 boinc boinc 912881650 Nov 27 10:50 HITS.pool.root.1
[2025-11-27 10:51:47] -rw------- 1 boinc boinc   8304640 Nov 27 10:51 result.tar.gz
10:51:49 (2615827): run_atlas exited; CPU time 494702.453483
10:51:49 (2615827): called boinc_finish(0)

</stderr_txt>
]]>

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