Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:02 (1661535): wrapper (7.7.26015): starting
17:41:02 (1661535): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:41:02] Arguments: --nthreads 8
[2025-11-25 17:41:02] Threads: 8
[2025-11-25 17:41:02] Checking for CVMFS
[2025-11-25 17:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:41:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:41:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:41:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:41:03] 2.13.3.0 14259 27785 343804 153300 0 163 25845463 32935936 25537 16776704 0 162490438 99.791 86385974 34034 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:41:03] CVMFS is ok
[2025-11-25 17:41:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:41:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:41:03] Further information can be found at the LHC@home message board.
[2025-11-25 17:41:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:41:03] Checking for apptainer binary...
[2025-11-25 17:41:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:41:03] Running /usr/bin/apptainer --version
[2025-11-25 17:41:03] apptainer version 1.4.4-1.el9
[2025-11-25 17:41:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:41:03] c-4-36.aglt2.org
[2025-11-25 17:41:03] apptainer works
[2025-11-25 17:41:03] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:41:03] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:41:03] Starting ATLAS job with PandaID=6896450039
[2025-11-25 17:41:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:46:29]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:46:29] 2025-11-26 17:45:32,270 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:46:29] 2025-11-26 17:45:32,272 | INFO     | sum of square deviations: 441525028262.95624
[2025-11-26 12:46:29] 2025-11-26 17:45:32,343 | INFO     | sum of deviations: 2369930142525.41
[2025-11-26 12:46:29] 2025-11-26 17:45:32,344 | INFO     | mean x: 1764144795.4382222
[2025-11-26 12:46:29] 2025-11-26 17:45:32,344 | INFO     | mean y: 2986255.423111111
[2025-11-26 12:46:29] 2025-11-26 17:45:32,344 | INFO     | intersect: -9466238950.080696
[2025-11-26 12:46:29] 2025-11-26 17:45:32,346 | INFO     | chi2: 11.903119212778142
[2025-11-26 12:46:29] 2025-11-26 17:45:32,352 | INFO     | sum of square deviations: 435664841031.4555
[2025-11-26 12:46:29] 2025-11-26 17:45:32,417 | INFO     | sum of deviations: 2772922501342.173
[2025-11-26 12:46:29] 2025-11-26 17:45:32,417 | INFO     | mean x: 1764144642.94375
[2025-11-26 12:46:29] 2025-11-26 17:45:32,417 | INFO     | mean y: 2996738.939285714
[2025-11-26 12:46:29] 2025-11-26 17:45:32,417 | INFO     | intersect: -11225442913.10916
[2025-11-26 12:46:29] 2025-11-26 17:45:32,419 | INFO     | chi2: 8.437670236513588
[2025-11-26 12:46:29] 2025-11-26 17:45:32,419 | INFO     | current chi2=8.437670236513588 (change=29.113788699556608 %)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,425 | INFO     | sum of square deviations: 429856815995.98706
[2025-11-26 12:46:29] 2025-11-26 17:45:32,485 | INFO     | sum of deviations: 3173541568863.563
[2025-11-26 12:46:29] 2025-11-26 17:45:32,489 | INFO     | mean x: 1764144490.4502242
[2025-11-26 12:46:29] 2025-11-26 17:45:32,490 | INFO     | mean y: 3007257.9470852017
[2025-11-26 12:46:29] 2025-11-26 17:45:32,490 | INFO     | intersect: -13021296802.355825
[2025-11-26 12:46:29] 2025-11-26 17:45:32,491 | INFO     | chi2: 5.103742731824311
[2025-11-26 12:46:29] 2025-11-26 17:45:32,491 | INFO     | current chi2=5.103742731824311 (change=39.51241766076465 %)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,493 | INFO     | sum of square deviations: 424100652397.9242
[2025-11-26 12:46:29] 2025-11-26 17:45:32,558 | INFO     | sum of deviations: 3471602088584.8467
[2025-11-26 12:46:29] 2025-11-26 17:45:32,559 | INFO     | mean x: 1764144337.9567568
[2025-11-26 12:46:29] 2025-11-26 17:45:32,559 | INFO     | mean y: 3015147.9135135133
[2025-11-26 12:46:29] 2025-11-26 17:45:32,559 | INFO     | intersect: -14437913281.6646
[2025-11-26 12:46:29] 2025-11-26 17:45:32,560 | INFO     | chi2: 2.9654403630456367
[2025-11-26 12:46:29] 2025-11-26 17:45:32,561 | INFO     | current chi2=2.9654403630456367 (change=41.896750701114335 %)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,566 | INFO     | sum of square deviations: 418396117674.7704
[2025-11-26 12:46:29] 2025-11-26 17:45:32,630 | INFO     | sum of deviations: 3554341100390.1562
[2025-11-26 12:46:29] 2025-11-26 17:45:32,631 | INFO     | mean x: 1764144185.4633484
[2025-11-26 12:46:29] 2025-11-26 17:45:32,631 | INFO     | mean y: 3017355.732126697
[2025-11-26 12:46:29] 2025-11-26 17:45:32,631 | INFO     | intersect: -14983666125.592161
[2025-11-26 12:46:29] 2025-11-26 17:45:32,637 | INFO     | chi2: 2.6348511551839904
[2025-11-26 12:46:29] 2025-11-26 17:45:32,637 | INFO     | current chi2=2.6348511551839904 (change=11.148064617361477 %)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,637 | INFO     | right removable region: 1104
[2025-11-26 12:46:29] 2025-11-26 17:45:32,639 | INFO     | sum of square deviations: 435663990935.4555
[2025-11-26 12:46:29] 2025-11-26 17:45:32,845 | INFO     | sum of deviations: 2045942043438.0889
[2025-11-26 12:46:29] 2025-11-26 17:45:32,845 | INFO     | mean x: 1764144947.94375
[2025-11-26 12:46:29] 2025-11-26 17:45:32,845 | INFO     | mean y: 2994676.3982142857
[2025-11-26 12:46:29] 2025-11-26 17:45:32,845 | INFO     | intersect: -8281688921.084936
[2025-11-26 12:46:29] 2025-11-26 17:45:32,847 | INFO     | chi2: 9.670334851710212
[2025-11-26 12:46:29] 2025-11-26 17:45:32,862 | INFO     | current chi2=9.670334851710212 (change=18.75797697355672 %)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,863 | INFO     | left removable region: 10
[2025-11-26 12:46:29] 2025-11-26 17:45:32,864 | INFO     | sum of square deviations: 406024957486.2342
[2025-11-26 12:46:29] 2025-11-26 17:45:32,936 | INFO     | sum of deviations: 3139973625096.4434
[2025-11-26 12:46:29] 2025-11-26 17:45:32,937 | INFO     | mean x: 1764144459.9734917
[2025-11-26 12:46:29] 2025-11-26 17:45:32,937 | INFO     | mean y: 3028182.222120658
[2025-11-26 12:46:29] 2025-11-26 17:45:32,937 | INFO     | intersect: -13639894433.845337
[2025-11-26 12:46:29] 2025-11-26 17:45:32,942 | INFO     | chi2: 0.311993612058818
[2025-11-26 12:46:29] 2025-11-26 17:45:32,943 | INFO     | current memory leak: 7.73 B/s (using 1094 data points, chi2=0.31)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | ..............................
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | . Timing measurements:
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | . get job = 0 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | . initial setup = 2 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,944 | INFO     | . payload setup = 8 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,945 | INFO     | . stage-in = 0 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,945 | INFO     | . payload execution = 68576 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,945 | INFO     | . stage-out = 11 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,945 | INFO     | . log creation = 3 s
[2025-11-26 12:46:29] 2025-11-26 17:45:32,945 | INFO     | ..............................
[2025-11-26 12:46:29] 2025-11-26 17:45:33,191 | INFO     | 
[2025-11-26 12:46:29] 2025-11-26 17:45:33,191 | INFO     | job summary report
[2025-11-26 12:46:29] 2025-11-26 17:45:33,191 | INFO     | --------------------------------------------------
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | PanDA job id: 6896450039
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | task id: 47556149
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | errors: (none)
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | pilot state: finished 
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | transexitcode: 0
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | exeerrorcode: 0
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | exeerrordiag: 
[2025-11-26 12:46:29] 2025-11-26 17:45:33,192 | INFO     | exitcode: 0
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | exitmsg: OK
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | cpuconsumptiontime: 299757 s
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | nevents: 1000
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | neventsw: 0
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | pid: 1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | pgrp: 1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | corecount: 8
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | event service: False
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 12: 2284582, 68586: 2341166, 68599: 2350160, 68600: 2350344, 68636: 2350686}
[2025-11-26 12:46:29] 2025-11-26 17:45:33,193 | INFO     | --------------------------------------------------
[2025-11-26 12:46:29] 2025-11-26 17:45:33,194 | INFO     | 
[2025-11-26 12:46:29] 2025-11-26 17:45:33,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 12:46:29] 2025-11-26 17:45:33,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,245 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:46:29] 2025-11-26 17:45:33,246 | INFO     | job 6896450039 has completed (purged errors)
[2025-11-26 12:46:29] 2025-11-26 17:45:33,246 | INFO     | overall cleanup function is called
[2025-11-26 12:46:29] 2025-11-26 17:45:34,290 | INFO     | --- collectZombieJob: --- 10, [1673360]
[2025-11-26 12:46:29] 2025-11-26 17:45:34,291 | INFO     | zombie collector waiting for pid 1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:34,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:46:29] 2025-11-26 17:45:34,291 | INFO     | collected zombie processes
[2025-11-26 12:46:29] 2025-11-26 17:45:34,291 | INFO     | will attempt to kill all subprocesses of pid=1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:35,685 | INFO     | process IDs to be killed: [1673360] (in reverse order)
[2025-11-26 12:46:29] 2025-11-26 17:45:37,220 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:46:29] 2025-11-26 17:45:37,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:46:29] 2025-11-26 17:45:37,237 | INFO     | did not find any defunct processes belonging to 1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:37,265 | INFO     | did not find any defunct processes belonging to 1673360
[2025-11-26 12:46:29] 2025-11-26 17:45:37,270 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:46:29] 2025-11-26 17:45:37,270 | INFO     | ready for new job
[2025-11-26 12:46:29] 2025-11-26 17:45:37,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:46:29] 2025-11-26 17:45:37,288 | INFO     | ***************************************
[2025-11-26 12:46:29] 2025-11-26 17:45:37,289 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:46:29] 2025-11-26 17:45:37,289 | INFO     | ***************************************
[2025-11-26 12:46:29] 2025-11-26 17:45:37,289 | INFO     | 
[2025-11-26 12:46:29] 2025-11-26 17:45:37,302 | INFO     | architecture information:
[2025-11-26 12:46:29] 2025-11-26 17:45:37,307 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:46:29] 2025-11-26 17:45:37,536 | INFO     | cat /etc/os-release:
[2025-11-26 12:46:29] NAME="CentOS Linux"
[2025-11-26 12:46:29] VERSION="7 (Core)"
[2025-11-26 12:46:29] ID="centos"
[2025-11-26 12:46:29] ID_LIKE="rhel fedora"
[2025-11-26 12:46:29] VERSION_ID="7"
[2025-11-26 12:46:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:46:29] ANSI_COLOR="0;31"
[2025-11-26 12:46:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:46:29] HOME_URL="https://www.centos.org/"
[2025-11-26 12:46:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:46:29] 
[2025-11-26 12:46:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:46:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:46:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:46:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:46:29] 
[2025-11-26 12:46:29] 2025-11-26 17:45:37,536 | INFO     | ***************************************
[2025-11-26 12:46:29] 2025-11-26 17:45:38,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 12:46:29] 2025-11-26 17:45:38,098 | INFO     | sufficient remaining disk space (71177338880 B)
[2025-11-26 12:46:29] 2025-11-26 17:45:38,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:46:29] 2025-11-26 17:45:38,099 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:46:29] 2025-11-26 17:45:38,099 | INFO     | update_server=False
[2025-11-26 12:46:29] 2025-11-26 17:45:38,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:46:29] 2025-11-26 17:45:38,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:46:29] 2025-11-26 17:45:38,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:46:29] 2025-11-26 17:45:38,400 | INFO     | all payload control threads have been joined
[2025-11-26 12:46:29] 2025-11-26 17:45:38,409 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 12:46:29] 2025-11-26 17:45:38,410 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 12:46:29] 2025-11-26 17:45:38,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:46:29] 2025-11-26 17:45:38,410 | INFO     | will abort loop
[2025-11-26 12:46:29] 2025-11-26 17:45:38,440 | INFO     | all data control threads have been joined
[2025-11-26 12:46:29] 2025-11-26 17:45:39,107 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,261 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,406 | INFO     | [payload] control thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,411 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,415 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,449 | INFO     | [data] control thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:46:29] 2025-11-26 17:45:39,606 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,683 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,716 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,756 | INFO     | all job control threads have been joined
[2025-11-26 12:46:29] 2025-11-26 17:45:39,799 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:39,915 | INFO     | [job] validate thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:40,130 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:40,379 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:40,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:40,762 | INFO     | [job] control thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:45:43,498 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:46:29] 2025-11-26 17:46:06,370 | INFO     | PID=1665249 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:46:29] 2025-11-26 17:46:06,370 | INFO     | .. there are 41 such processes running
[2025-11-26 12:46:29] 2025-11-26 17:46:06,371 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:46:29] 2025-11-26 17:46:06,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:46:29] 2025-11-26 17:46:06,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:46:29] 2025-11-26 17:46:21,386 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:46:29] 2025-11-26 17:46:23,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878511847232)>', '<ExcThread(monitor, started 139878025131776)>']
[2025-11-26 12:46:29] 2025-11-26 17:46:23,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:46:29] 2025-11-26 17:46:23,549 | INFO     | [monitor] control thread has ended
[2025-11-26 12:46:29] 2025-11-26 17:46:28,265 | INFO     | all workflow threads have been joined
[2025-11-26 12:46:29] 2025-11-26 17:46:28,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:46:29] 2025-11-26 17:46:28,266 | INFO     | traces error code: 0
[2025-11-26 12:46:29] 2025-11-26 17:46:28,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:46:29] 2025-11-26 17:46:28,537 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:46:29] 2025-11-26 17:46:28,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:46:29] 2025-11-26 17:46:28,663 [wrapper] pilotpid: 1665249
[2025-11-26 12:46:29] 2025-11-26 17:46:28,714 [wrapper] Pilot exit status: 0
[2025-11-26 12:46:29] 2025-11-26 17:46:28,851 [wrapper] pandaids: 6896450039
[2025-11-26 12:46:29] 2025-11-26 17:46:29,037 [wrapper] cleanup supervisor_pilot 2386121 1665250
[2025-11-26 12:46:29] 2025-11-26 17:46:29,041 [wrapper] Test setup, not cleaning
[2025-11-26 12:46:29] 2025-11-26 17:46:29,043 [wrapper] apfmon messages muted
[2025-11-26 12:46:29] 2025-11-26 17:46:29,067 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:46:29] 2025-11-26 17:46:29,069 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:46:29]  *** Error codes and diagnostics ***
[2025-11-26 12:46:29]     "exeErrorCode": 0,
[2025-11-26 12:46:29]     "exeErrorDiag": "",
[2025-11-26 12:46:29]     "pilotErrorCode": 0,
[2025-11-26 12:46:29]     "pilotErrorDiag": "",
[2025-11-26 12:46:29]  *** Listing of results directory ***
[2025-11-26 12:46:29] total 1320316
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:30 queuedata.json
[2025-11-26 12:46:29] -rwx------. 1 boincer umatlas     36292 Nov 24 22:35 runpilot2-wrapper.sh
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:46:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:41 run_atlas
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:41 job.xml
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas 409757132 Nov 25 17:41 EVNT.47483658._001492.pool.root.1
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:41 start_atlas.sh
[2025-11-26 12:46:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:41 shared
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 17:41 input.tar.gz
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:41 boinc_lockfile
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 17:41 pandaJob.out
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas        57 Nov 25 17:41 setup.sh.local
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas    991877 Nov 25 17:41 agis_schedconf.cvmfs.json
[2025-11-26 12:46:29] drwx------. 5 boincer umatlas      4096 Nov 25 17:41 pilot3
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas       533 Nov 26 12:24 boinc_task_state.xml
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas 916364681 Nov 26 12:43 HITS.47556149._004784.pool.root.1
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas      1059 Nov 26 12:44 memory_monitor_summary.json
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas   2232483 Nov 26 12:44 log.47556149._004784.job.log.tgz.1
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 12:45 init_data.xml
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas      8624 Nov 26 12:45 heartbeat.json
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas        95 Nov 26 12:46 pilot_heartbeat.json
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas      5010 Nov 26 12:46 pilotlog.txt
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:46 boinc_mmap_file
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:46 wrapper_checkpoint.txt
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas   8749785 Nov 26 12:46 log.47556149._004784.job.log.1
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas       353 Nov 26 12:46 output.list
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:46 runtime_log
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas  10997760 Nov 26 12:46 result.tar.gz
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 12:46 runtime_log.err
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas       658 Nov 26 12:46 GlWKDmx0yh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeIJKDmFNfIbn.diag
[2025-11-26 12:46:29] -rw-r--r--. 1 boincer umatlas     21151 Nov 26 12:46 stderr.txt
[2025-11-26 12:46:29] HITS file was successfully produced:
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas 916364681 Nov 26 12:43 shared/HITS.pool.root.1
[2025-11-26 12:46:29]  *** Contents of shared directory: ***
[2025-11-26 12:46:29] total 1306384
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas 409757132 Nov 25 17:41 ATLAS.root_0
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:41 start_atlas.sh
[2025-11-26 12:46:29] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 17:41 input.tar.gz
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas 916364681 Nov 26 12:43 HITS.pool.root.1
[2025-11-26 12:46:29] -rw-------. 1 boincer umatlas  10997760 Nov 26 12:46 result.tar.gz
12:46:31 (1661535): run_atlas exited; CPU time 302615.812508
12:46:31 (1661535): called boinc_finish(0)

</stderr_txt>
]]>

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