Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:45:19 (3545427): wrapper (7.7.26015): starting
17:45:19 (3545427): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:45:19] Arguments: --nthreads 8
[2025-11-25 17:45:19] Threads: 8
[2025-11-25 17:45:19] Checking for CVMFS
[2025-11-25 17:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:45:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:45:20] 2.13.3.0 12348 29228 382048 153300 0 176 32697966 32935937 34241 16776704 0 144763300 99.498 184653760 35608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:45:20] CVMFS is ok
[2025-11-25 17:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:45:20] Further information can be found at the LHC@home message board.
[2025-11-25 17:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:45:20] Checking for apptainer binary...
[2025-11-25 17:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:45:20] Running /usr/bin/apptainer --version
[2025-11-25 17:45:21] apptainer version 1.4.4-1.el9
[2025-11-25 17:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:45:21] c6-12-27-2.aglt2.org
[2025-11-25 17:45:21] apptainer works
[2025-11-25 17:45:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:45:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:45:21] Starting ATLAS job with PandaID=6896420940
[2025-11-25 17:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:29:10]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:29:10] 2025-11-26 19:27:49,498 | INFO     | time since job start (74526s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:27:51,362 | INFO     | monitor loop #4127: job 0:6896420940 is in state 'finished'
[2025-11-26 14:29:10] 2025-11-26 19:27:51,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:29:10] 2025-11-26 19:27:51,504 | INFO     | time since job start (74528s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:27:53,514 | INFO     | time since job start (74530s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:27:53,871 | INFO     | monitor loop #4128: job 0:6896420940 is in state 'finished'
[2025-11-26 14:29:10] 2025-11-26 19:27:53,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:29:10] 2025-11-26 19:27:55,521 | INFO     | time since job start (74532s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:27:56,389 | INFO     | monitor loop #4129: job 0:6896420940 is in state 'finished'
[2025-11-26 14:29:10] 2025-11-26 19:27:56,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:29:10] 2025-11-26 19:27:57,528 | INFO     | time since job start (74534s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:27:58,900 | INFO     | monitor loop #4130: job 0:6896420940 is in state 'finished'
[2025-11-26 14:29:10] 2025-11-26 19:27:58,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:29:10] 2025-11-26 19:27:59,535 | INFO     | time since job start (74536s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:28:00,967 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:29:10] 2025-11-26 19:28:01,068 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2688.767875000001
[2025-11-26 14:29:10] 2025-11-26 19:28:01,111 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896420940/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,112 | INFO     | extracted standard info from prmon json
[2025-11-26 14:29:10] 2025-11-26 19:28:01,112 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:29:10] 2025-11-26 19:28:01,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:29:10] 2025-11-26 19:28:01,177 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:29:10] 2025-11-26 19:28:01,187 | INFO     | sum of square deviations: 564506824833.234
[2025-11-26 14:29:10] 2025-11-26 19:28:01,319 | INFO     | sum of deviations: 1251008175082.4612
[2025-11-26 14:29:10] 2025-11-26 19:28:01,319 | INFO     | mean x: 1764147997.6855037
[2025-11-26 14:29:10] 2025-11-26 19:28:01,320 | INFO     | mean y: 2948870.009009009
[2025-11-26 14:29:10] 2025-11-26 19:28:01,320 | INFO     | intersect: -3906593884.9645886
[2025-11-26 14:29:10] 2025-11-26 19:28:01,322 | INFO     | chi2: 19.444264396667705
[2025-11-26 14:29:10] 2025-11-26 19:28:01,329 | INFO     | sum of square deviations: 557601760774.8076
[2025-11-26 14:29:10] 2025-11-26 19:28:01,385 | INFO     | sum of deviations: 1711709590675.8152
[2025-11-26 14:29:10] 2025-11-26 19:28:01,386 | INFO     | mean x: 1764147845.1949012
[2025-11-26 14:29:10] 2025-11-26 19:28:01,386 | INFO     | mean y: 2959041.8741776315
[2025-11-26 14:29:10] 2025-11-26 19:28:01,386 | INFO     | intersect: -5412570460.389574
[2025-11-26 14:29:10] 2025-11-26 19:28:01,396 | INFO     | chi2: 15.458336037854936
[2025-11-26 14:29:10] 2025-11-26 19:28:01,396 | INFO     | current chi2=15.458336037854936 (change=20.499249945890803 %)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,396 | INFO     | right removable region: 1215
[2025-11-26 14:29:10] 2025-11-26 19:28:01,404 | INFO     | sum of square deviations: 557600057652.8088
[2025-11-26 14:29:10] 2025-11-26 19:28:01,434 | INFO     | monitor loop #4131: job 0:6896420940 is in state 'finished'
[2025-11-26 14:29:10] 2025-11-26 19:28:01,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,470 | INFO     | sum of deviations: 913244759408.1232
[2025-11-26 14:29:10] 2025-11-26 19:28:01,471 | INFO     | mean x: 1764148150.1949012
[2025-11-26 14:29:10] 2025-11-26 19:28:01,471 | INFO     | mean y: 2956320.375
[2025-11-26 14:29:10] 2025-11-26 19:28:01,471 | INFO     | intersect: -2886388884.8010426
[2025-11-26 14:29:10] 2025-11-26 19:28:01,473 | INFO     | chi2: 17.317842370248705
[2025-11-26 14:29:10] 2025-11-26 19:28:01,473 | INFO     | current chi2=17.317842370248705 (change=10.93598597015282 %)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,473 | INFO     | left removable region: 10
[2025-11-26 14:29:10] 2025-11-26 19:28:01,479 | INFO     | sum of square deviations: 542605856880.9343
[2025-11-26 14:29:10] 2025-11-26 19:28:01,537 | INFO     | sum of deviations: 1378953261951.9705
[2025-11-26 14:29:10] 2025-11-26 19:28:01,542 | INFO     | mean x: 1764148119.7161825
[2025-11-26 14:29:10] 2025-11-26 19:28:01,542 | INFO     | mean y: 2970007.950207469
[2025-11-26 14:29:10] 2025-11-26 19:28:01,542 | INFO     | intersect: -4480353888.022547
[2025-11-26 14:29:10] 2025-11-26 19:28:01,544 | INFO     | chi2: 12.674049824009465
[2025-11-26 14:29:10] 2025-11-26 19:28:01,544 | INFO     | current memory leak: 2.54 B/s (using 1205 data points, chi2=12.67)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,550 | INFO     | could have reported an average CPU frequency of 2733 MHz (44 samples)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,550 | INFO     | ..............................
[2025-11-26 14:29:10] 2025-11-26 19:28:01,550 | INFO     | . Timing measurements:
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . get job = 0 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . initial setup = 3 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . payload setup = 12 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . stage-in = 0 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . payload execution = 74439 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . stage-out = 23 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | . log creation = 4 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,551 | INFO     | ..............................
[2025-11-26 14:29:10] 2025-11-26 19:28:01,562 | INFO     | time since job start (74538s) is within the limit (172800.0s)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,755 | INFO     | 
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | job summary report
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | --------------------------------------------------
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | PanDA job id: 6896420940
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | task id: 47556149
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | errors: (none)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | pilot state: finished 
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | transexitcode: 0
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | exeerrorcode: 0
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | exeerrordiag: 
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | exitcode: 0
[2025-11-26 14:29:10] 2025-11-26 19:28:01,756 | INFO     | exitmsg: OK
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | cpuconsumptiontime: 258772 s
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | nevents: 1000
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | neventsw: 0
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | pid: 3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | pgrp: 3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | corecount: 8
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | event service: False
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | sizes: {0: 2284264, 11: 2284554, 74458: 2343630, 74481: 2352624, 74485: 2352680, 74519: 2352926}
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | --------------------------------------------------
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | 
[2025-11-26 14:29:10] 2025-11-26 19:28:01,757 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 14:29:10] 2025-11-26 19:28:01,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:29:10] 2025-11-26 19:28:01,827 | INFO     | job 6896420940 has completed (purged errors)
[2025-11-26 14:29:10] 2025-11-26 19:28:01,828 | INFO     | overall cleanup function is called
[2025-11-26 14:29:10] 2025-11-26 19:28:02,856 | INFO     | --- collectZombieJob: --- 10, [3556550]
[2025-11-26 14:29:10] 2025-11-26 19:28:02,856 | INFO     | zombie collector waiting for pid 3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:02,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:29:10] 2025-11-26 19:28:02,856 | INFO     | collected zombie processes
[2025-11-26 14:29:10] 2025-11-26 19:28:02,856 | INFO     | will attempt to kill all subprocesses of pid=3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:04,817 | INFO     | process IDs to be killed: [3556550] (in reverse order)
[2025-11-26 14:29:10] 2025-11-26 19:28:05,204 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:29:10] 2025-11-26 19:28:05,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:29:10] 2025-11-26 19:28:05,364 | INFO     | did not find any defunct processes belonging to 3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:05,470 | INFO     | did not find any defunct processes belonging to 3556550
[2025-11-26 14:29:10] 2025-11-26 19:28:05,481 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:29:10] 2025-11-26 19:28:05,482 | INFO     | ready for new job
[2025-11-26 14:29:10] 2025-11-26 19:28:05,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:29:10] 2025-11-26 19:28:05,495 | INFO     | ***************************************
[2025-11-26 14:29:10] 2025-11-26 19:28:05,495 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:29:10] 2025-11-26 19:28:05,495 | INFO     | ***************************************
[2025-11-26 14:29:10] 2025-11-26 19:28:05,495 | INFO     | 
[2025-11-26 14:29:10] 2025-11-26 19:28:05,675 | INFO     | architecture information:
[2025-11-26 14:29:10] 2025-11-26 19:28:05,689 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:29:10] 2025-11-26 19:28:05,839 | INFO     | cat /etc/os-release:
[2025-11-26 14:29:10] NAME="CentOS Linux"
[2025-11-26 14:29:10] VERSION="7 (Core)"
[2025-11-26 14:29:10] ID="centos"
[2025-11-26 14:29:10] ID_LIKE="rhel fedora"
[2025-11-26 14:29:10] VERSION_ID="7"
[2025-11-26 14:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:29:10] ANSI_COLOR="0;31"
[2025-11-26 14:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:29:10] HOME_URL="https://www.centos.org/"
[2025-11-26 14:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:29:10] 
[2025-11-26 14:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:29:10] 
[2025-11-26 14:29:10] 2025-11-26 19:28:05,839 | INFO     | ***************************************
[2025-11-26 14:29:10] 2025-11-26 19:28:06,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 14:29:10] 2025-11-26 19:28:06,510 | INFO     | sufficient remaining disk space (81345380352 B)
[2025-11-26 14:29:10] 2025-11-26 19:28:06,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:29:10] 2025-11-26 19:28:06,510 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:29:10] 2025-11-26 19:28:06,510 | INFO     | update_server=False
[2025-11-26 14:29:10] 2025-11-26 19:28:06,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:29:10] 2025-11-26 19:28:06,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:29:10] 2025-11-26 19:28:06,639 | INFO     | all data control threads have been joined
[2025-11-26 14:29:10] 2025-11-26 19:28:06,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:29:10] 2025-11-26 19:28:07,034 | INFO     | all payload control threads have been joined
[2025-11-26 14:29:10] 2025-11-26 19:28:07,104 | INFO     | all job control threads have been joined
[2025-11-26 14:29:10] 2025-11-26 19:28:07,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:29:10] 2025-11-26 19:28:07,475 | INFO     | aborting loop
[2025-11-26 14:29:10] 2025-11-26 19:28:07,517 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:07,678 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:07,679 | INFO     | [data] control thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:07,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:29:10] 2025-11-26 19:28:07,782 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:07,976 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,040 | INFO     | [payload] control thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,110 | INFO     | [job] control thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,199 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,201 | INFO     | [job] validate thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,401 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,402 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,481 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:08,708 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:09,709 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:10,545 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:29:10] 2025-11-26 19:28:39,226 | INFO     | PID=3549236 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:29:10] 2025-11-26 19:28:39,227 | INFO     | .. there are 50 such processes running
[2025-11-26 14:29:10] 2025-11-26 19:28:39,227 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:29:10] 2025-11-26 19:28:39,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:29:10] 2025-11-26 19:28:39,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:29:10] 2025-11-26 19:28:59,730 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:29:10] 2025-11-26 19:29:01,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801149425472)>', '<ExcThread(monitor, started 139800581502720)>']
[2025-11-26 14:29:10] 2025-11-26 19:29:02,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:29:10] 2025-11-26 19:29:02,373 | INFO     | [monitor] control thread has ended
[2025-11-26 14:29:10] 2025-11-26 19:29:06,401 | INFO     | all workflow threads have been joined
[2025-11-26 14:29:10] 2025-11-26 19:29:06,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:29:10] 2025-11-26 19:29:06,401 | INFO     | traces error code: 0
[2025-11-26 14:29:10] 2025-11-26 19:29:06,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:29:10] 2025-11-26 19:29:09,224 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:29:10] 2025-11-26 19:29:09,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:29:10] 2025-11-26 19:29:09,271 [wrapper] pilotpid: 3549236
[2025-11-26 14:29:10] 2025-11-26 19:29:09,316 [wrapper] Pilot exit status: 0
[2025-11-26 14:29:10] 2025-11-26 19:29:09,391 [wrapper] pandaids: 6896420940
[2025-11-26 14:29:10] 2025-11-26 19:29:09,568 [wrapper] cleanup supervisor_pilot  444665 3549237
[2025-11-26 14:29:10] 2025-11-26 19:29:09,585 [wrapper] Test setup, not cleaning
[2025-11-26 14:29:10] 2025-11-26 19:29:09,594 [wrapper] apfmon messages muted
[2025-11-26 14:29:10] 2025-11-26 19:29:09,625 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:29:10] 2025-11-26 19:29:09,646 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:29:10]  *** Error codes and diagnostics ***
[2025-11-26 14:29:10]     "exeErrorCode": 0,
[2025-11-26 14:29:10]     "exeErrorDiag": "",
[2025-11-26 14:29:10]     "pilotErrorCode": 0,
[2025-11-26 14:29:10]     "pilotErrorDiag": "",
[2025-11-26 14:29:10]  *** Listing of results directory ***
[2025-11-26 14:29:10] total 1344232
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:06 queuedata.json
[2025-11-26 14:29:10] -rwx------. 1 boincer umatlas     36292 Nov 24 22:09 runpilot2-wrapper.sh
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:29:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:45 run_atlas
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:45 job.xml
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas 412567362 Nov 25 17:45 EVNT.47483658._001484.pool.root.1
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:45 start_atlas.sh
[2025-11-26 14:29:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:45 shared
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 17:45 input.tar.gz
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:45 boinc_lockfile
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 17:45 pandaJob.out
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas        57 Nov 25 17:45 setup.sh.local
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas    991877 Nov 25 17:45 agis_schedconf.cvmfs.json
[2025-11-26 14:29:10] drwx------. 5 boincer umatlas      4096 Nov 25 17:45 pilot3
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:48 boinc_task_state.xml
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas      6881 Nov 26 14:20 init_data.xml
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas 937614016 Nov 26 14:24 HITS.47556149._004702.pool.root.1
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas      1058 Nov 26 14:26 memory_monitor_summary.json
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas   2263468 Nov 26 14:27 log.47556149._004702.job.log.tgz.1
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas        95 Nov 26 14:27 pilot_heartbeat.json
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas      8628 Nov 26 14:28 heartbeat.json
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:29 wrapper_checkpoint.txt
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas      4824 Nov 26 14:29 pilotlog.txt
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas   8932608 Nov 26 14:29 log.47556149._004702.job.log.1
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:29 boinc_mmap_file
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas       353 Nov 26 14:29 output.list
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:29 runtime_log
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas  11212800 Nov 26 14:29 result.tar.gz
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 14:29 runtime_log.err
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas       662 Nov 26 14:29 d88MDmfbyh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma4LKDmKuxCcn.diag
[2025-11-26 14:29:10] -rw-r--r--. 1 boincer umatlas     21751 Nov 26 14:29 stderr.txt
[2025-11-26 14:29:10] HITS file was successfully produced:
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas 937614016 Nov 26 14:24 shared/HITS.pool.root.1
[2025-11-26 14:29:10]  *** Contents of shared directory: ***
[2025-11-26 14:29:10] total 1330096
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas 412567362 Nov 25 17:45 ATLAS.root_0
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:45 start_atlas.sh
[2025-11-26 14:29:10] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 17:45 input.tar.gz
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas 937614016 Nov 26 14:24 HITS.pool.root.1
[2025-11-26 14:29:10] -rw-------. 1 boincer umatlas  11212800 Nov 26 14:29 result.tar.gz
14:29:11 (3545427): run_atlas exited; CPU time 261650.503345
14:29:11 (3545427): called boinc_finish(0)

</stderr_txt>
]]>

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